RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 OR1F12Q8NHA8 337 aa8.85□□□□□ -0.99
CHMP2A-202ENST00000596708 RAB40AQ8WXH6 277 aa8.85□□□□□ -0.99
CHMP2A-202ENST00000596708 ACOT11Q8WXI4 607 aaPredicted RBP8.85□□□□□ -0.99
CHMP2A-202ENST00000596708 ZDHHC16Q969W1 377 aa8.85□□□□□ -0.99
CHMP2A-202ENST00000596708 MEGF10Q96KG7 1140 aa8.85□□□□□ -0.99
CHMP2A-202ENST00000596708 ZNF582Q96NG8 517 aaPredicted RBP8.85□□□□□ -0.99
CHMP2A-202ENST00000596708 SLITRK2Q9H156 845 aa8.85□□□□□ -0.99
CHMP2A-202ENST00000596708 MRGBPQ9NV56 204 aa8.85□□□□□ -0.99
CHMP2A-202ENST00000596708 ASH2LQ9UBL3 628 aa8.85□□□□□ -0.99
CHMP2A-202ENST00000596708 COA3Q9Y2R0 106 aaPredicted RBP8.85□□□□□ -0.99
CHMP2A-202ENST00000596708 POLR1DQ9Y2S0 133 aa8.85□□□□□ -0.99
CHMP2A-202ENST00000596708 IGHV2-70DA0A0C4DH43 119 aa8.84□□□□□ -0.99
CHMP2A-202ENST00000596708 MDFIC2A0A1B0GVS7 189 aa8.84□□□□□ -0.99
CHMP2A-202ENST00000596708 LRRC30A6NM36 301 aa8.84□□□□□ -0.99
CHMP2A-202ENST00000596708 H0YL77 283 aa8.84□□□□□ -0.99
CHMP2A-202ENST00000596708 CDC42EP2O14613 210 aa8.84□□□□□ -0.99
CHMP2A-202ENST00000596708 FFAR1O14842 300 aa8.84□□□□□ -0.99
CHMP2A-202ENST00000596708 GSTA4O15217 222 aa8.84□□□□□ -0.99
CHMP2A-202ENST00000596708 RER1O15258 196 aa8.84□□□□□ -0.99
CHMP2A-202ENST00000596708 AHCYL1O43865 530 aa8.84□□□□□ -0.99
CHMP2A-202ENST00000596708 ZNF682O95780 498 aa8.84□□□□□ -0.99
CHMP2A-202ENST00000596708 CRYBA1P05813 215 aa8.84□□□□□ -0.99
CHMP2A-202ENST00000596708 DBHP09172 617 aa8.84□□□□□ -0.99
CHMP2A-202ENST00000596708 PPIAL4GP0DN37 164 aa8.84□□□□□ -0.99
CHMP2A-202ENST00000596708 IRF2P14316 349 aa8.84□□□□□ -0.99
CHMP2A-202ENST00000596708 MDKP21741 143 aaPredicted RBP8.84□□□□□ -0.99
CHMP2A-202ENST00000596708 CPT2P23786 658 aa8.84□□□□□ -0.99
CHMP2A-202ENST00000596708 RGS6P49758 472 aa8.84□□□□□ -0.99
CHMP2A-202ENST00000596708 LSM6P62312 80 aaKnown RBP8.84□□□□□ -0.99
CHMP2A-202ENST00000596708 KRR1Q13601 381 aaKnown RBP8.84□□□□□ -0.99
CHMP2A-202ENST00000596708 IFI44LQ53G44 452 aa8.84□□□□□ -0.99
CHMP2A-202ENST00000596708 PDLIM3Q53GG5 364 aaPredicted RBP8.84□□□□□ -0.99
CHMP2A-202ENST00000596708 TMPRSS11FQ6ZWK6 438 aa8.84□□□□□ -0.99
CHMP2A-202ENST00000596708 MBOAT2Q6ZWT7 520 aa8.84□□□□□ -0.99
CHMP2A-202ENST00000596708 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.84□□□□□ -0.99
CHMP2A-202ENST00000596708 MOGAT3Q86VF5 341 aa8.84□□□□□ -0.99
CHMP2A-202ENST00000596708 GLB1L2Q8IW92 636 aa8.84□□□□□ -0.99
CHMP2A-202ENST00000596708 C1orf87Q8N0U7 546 aa8.84□□□□□ -0.99
CHMP2A-202ENST00000596708 POU5F2Q8N7G0 328 aa8.84□□□□□ -0.99
CHMP2A-202ENST00000596708 BHLHE23Q8NDY6 225 aa8.84□□□□□ -0.99
CHMP2A-202ENST00000596708 OR8B3Q8NGG8 313 aa8.84□□□□□ -0.99
CHMP2A-202ENST00000596708 APOBEC3DQ96AK3 386 aaPredicted RBP8.84□□□□□ -0.99
CHMP2A-202ENST00000596708 TMIGD2Q96BF3 282 aa8.84□□□□□ -0.99
CHMP2A-202ENST00000596708 UPRTQ96BW1 309 aa8.84□□□□□ -0.99
CHMP2A-202ENST00000596708 RASD2Q96D21 266 aa8.84□□□□□ -0.99
CHMP2A-202ENST00000596708 NEIL1Q96FI4 390 aaPredicted RBP8.84□□□□□ -0.99
CHMP2A-202ENST00000596708 OR8B2Q96RD0 313 aa8.84□□□□□ -0.99
CHMP2A-202ENST00000596708 NUDT16L1Q9BRJ7 211 aaKnown RBP8.84□□□□□ -0.99
CHMP2A-202ENST00000596708 TMEM246Q9BRR3 403 aa8.84□□□□□ -0.99
CHMP2A-202ENST00000596708 SYT4Q9H2B2 425 aa8.84□□□□□ -0.99
CHMP2A-202ENST00000596708 TNFRSF19Q9NS68 423 aa8.84□□□□□ -0.99
CHMP2A-202ENST00000596708 OR6C6A6NF89 314 aa8.83□□□□□ -1
CHMP2A-202ENST00000596708 F5H5P2 479 aa8.83□□□□□ -1
CHMP2A-202ENST00000596708 J3QW42 95 aa8.83□□□□□ -1
CHMP2A-202ENST00000596708 SOCS2O14508 198 aa8.83□□□□□ -1
CHMP2A-202ENST00000596708 IMPA2O14732 288 aa8.83□□□□□ -1
CHMP2A-202ENST00000596708 HOXA3O43365 443 aaPredicted RBP8.83□□□□□ -1
CHMP2A-202ENST00000596708 NDUFB2O95178 105 aa8.83□□□□□ -1
CHMP2A-202ENST00000596708 PLATP00750 562 aa8.83□□□□□ -1
CHMP2A-202ENST00000596708 TROVE2P10155 538 aaKnown RBP eCLIP8.83□□□□□ -1
CHMP2A-202ENST00000596708 PAX2Q02962 417 aa8.83□□□□□ -1
CHMP2A-202ENST00000596708 FAM201AQ5SY85 155 aa8.83□□□□□ -1
CHMP2A-202ENST00000596708 GPR139Q6DWJ6 353 aa8.83□□□□□ -1
CHMP2A-202ENST00000596708 FBXW12Q6X9E4 464 aa8.83□□□□□ -1
CHMP2A-202ENST00000596708 BRD3OSQ6XYD6 125 aa8.83□□□□□ -1
CHMP2A-202ENST00000596708 C9orf139Q6ZV77 190 aa8.83□□□□□ -1
CHMP2A-202ENST00000596708 NLRC3Q7RTR2 1065 aa8.83□□□□□ -1
CHMP2A-202ENST00000596708 FAM122BQ7Z309 247 aa8.83□□□□□ -1
CHMP2A-202ENST00000596708 CYP4Z1Q86W10 505 aa8.83□□□□□ -1
CHMP2A-202ENST00000596708 GJC3Q8NFK1 279 aa8.83□□□□□ -1
CHMP2A-202ENST00000596708 OR10S1Q8NGN2 331 aa8.83□□□□□ -1
CHMP2A-202ENST00000596708 FAM46AQ96IP4 442 aaKnown RBP8.83□□□□□ -1
CHMP2A-202ENST00000596708 NUAK2Q9H093 628 aa8.83□□□□□ -1
CHMP2A-202ENST00000596708 WDR76Q9H967 626 aa8.83□□□□□ -1
CHMP2A-202ENST00000596708 NMNAT1Q9HAN9 279 aaPredicted RBP8.83□□□□□ -1
CHMP2A-202ENST00000596708 SAR1AQ9NR31 198 aa8.83□□□□□ -1
CHMP2A-202ENST00000596708 TMEM100Q9NV29 134 aa8.83□□□□□ -1
CHMP2A-202ENST00000596708 GMPR2Q9P2T1 348 aaKnown RBP8.83□□□□□ -1
CHMP2A-202ENST00000596708 CLN8Q9UBY8 286 aa8.83□□□□□ -1
CHMP2A-202ENST00000596708 RPS6KA6Q9UK32 745 aa8.83□□□□□ -1
CHMP2A-202ENST00000596708 TMEM5Q9Y2B1 443 aa8.83□□□□□ -1
CHMP2A-202ENST00000596708 AP3M1Q9Y2T2 418 aa8.83□□□□□ -1
CHMP2A-202ENST00000596708 IER3IP1Q9Y5U9 82 aa8.83□□□□□ -1
CHMP2A-202ENST00000596708 KIR2DS1A0A191URI9 304 aa8.82□□□□□ -1
CHMP2A-202ENST00000596708 IQCF6A8MYZ5 107 aa8.82□□□□□ -1
CHMP2A-202ENST00000596708 CXCR6O00574 342 aa8.82□□□□□ -1
CHMP2A-202ENST00000596708 MLNRO43193 412 aa8.82□□□□□ -1
CHMP2A-202ENST00000596708 PTP4A3O75365 173 aa8.82□□□□□ -1
CHMP2A-202ENST00000596708 KNG1P01042 644 aa8.82□□□□□ -1
CHMP2A-202ENST00000596708 HLA-DPB1P04440 258 aa8.82□□□□□ -1
CHMP2A-202ENST00000596708 SELEP16581 610 aa8.82□□□□□ -1
CHMP2A-202ENST00000596708 ZNF26P17031 533 aaPredicted RBP8.82□□□□□ -1
CHMP2A-202ENST00000596708 FPR3P25089 353 aa8.82□□□□□ -1
CHMP2A-202ENST00000596708 SDHAP31040 664 aa8.82□□□□□ -1
CHMP2A-202ENST00000596708 PITPNBP48739 271 aa8.82□□□□□ -1
CHMP2A-202ENST00000596708 MEP1BQ16820 701 aa8.82□□□□□ -1
CHMP2A-202ENST00000596708 ZNF181Q2M3W8 571 aa8.82□□□□□ -1
CHMP2A-202ENST00000596708 DEFB112Q30KQ8 113 aa8.82□□□□□ -1
CHMP2A-202ENST00000596708 ZNF404Q494X3 552 aa8.82□□□□□ -1
CHMP2A-202ENST00000596708 MIDNQ504T8 468 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 286.5 ms