RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 PROKR2Q8NFJ6 384 aa18.23■□□□□ 0.51
PKP3-211ENST00000534401 OR9Q1Q8NGQ5 310 aa18.23■□□□□ 0.51
PKP3-211ENST00000534401 UBASH3BQ8TF42 649 aa18.23■□□□□ 0.51
PKP3-211ENST00000534401 MAP6Q96JE9 813 aa18.23■□□□□ 0.51
PKP3-211ENST00000534401 COG8Q96MW5 612 aa18.23■□□□□ 0.51
PKP3-211ENST00000534401 HCAR1Q9BXC0 346 aa18.23■□□□□ 0.51
PKP3-211ENST00000534401 GABARAPL1Q9H0R8 117 aa18.23■□□□□ 0.51
PKP3-211ENST00000534401 POLR1DQ9Y2S0 133 aa18.23■□□□□ 0.51
PKP3-211ENST00000534401 COMMD3-BMI1R4GMX3 469 aa18.23■□□□□ 0.51
PKP3-211ENST00000534401 SONP18583 2426 aaKnown RBP18.23■□□□□ 0.51
PKP3-211ENST00000534401 NAV3Q8IVL0 2385 aa18.22■□□□□ 0.51
PKP3-211ENST00000534401 A0A1W2PPW3 197 aa18.22■□□□□ 0.51
PKP3-211ENST00000534401 SURF4O15260 269 aa18.22■□□□□ 0.51
PKP3-211ENST00000534401 HPXP02790 462 aa18.22■□□□□ 0.51
PKP3-211ENST00000534401 HMGN1P05114 100 aa18.22■□□□□ 0.51
PKP3-211ENST00000534401 CLUP10909 449 aa18.22■□□□□ 0.51
PKP3-211ENST00000534401 NAT2P11245 290 aa18.22■□□□□ 0.51
PKP3-211ENST00000534401 FCGR1AP12314 374 aa18.22■□□□□ 0.51
PKP3-211ENST00000534401 ZNF3P17036 446 aa18.22■□□□□ 0.51
PKP3-211ENST00000534401 KITLGP21583 273 aa18.22■□□□□ 0.51
PKP3-211ENST00000534401 FMO3P31513 532 aa18.22■□□□□ 0.51
PKP3-211ENST00000534401 OTX1P32242 354 aaPredicted RBP18.22■□□□□ 0.51
PKP3-211ENST00000534401 ACTR3P61158 418 aa18.22■□□□□ 0.51
PKP3-211ENST00000534401 SPATA46Q5T0L3 261 aa18.22■□□□□ 0.51
PKP3-211ENST00000534401 LYPD4Q6UWN0 246 aa18.22■□□□□ 0.51
PKP3-211ENST00000534401 HIPK1Q86Z02 1210 aa18.22■□□□□ 0.51
PKP3-211ENST00000534401 LINC00346Q8IVM7 164 aa18.22■□□□□ 0.51
PKP3-211ENST00000534401 ATG16L2Q8NAA4 619 aa18.22■□□□□ 0.51
PKP3-211ENST00000534401 MAPK1IP1LQ8NDC0 245 aa18.22■□□□□ 0.51
PKP3-211ENST00000534401 TPK1Q9H3S4 243 aa18.22■□□□□ 0.51
PKP3-211ENST00000534401 POFUT1Q9H488 388 aa18.22■□□□□ 0.51
PKP3-211ENST00000534401 DDX28Q9NUL7 540 aaKnown RBP18.22■□□□□ 0.51
PKP3-211ENST00000534401 CGGBP1Q9UFW8 167 aaPredicted RBP18.22■□□□□ 0.51
PKP3-211ENST00000534401 GRIP1Q9Y3R0 1128 aa18.22■□□□□ 0.51
PKP3-211ENST00000534401 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.22■□□□□ 0.512e-6■■■■□ 25.3
PKP3-211ENST00000534401 EBAG9O00559 213 aa18.21■□□□□ 0.51
PKP3-211ENST00000534401 CIB2O75838 187 aa18.21■□□□□ 0.51
PKP3-211ENST00000534401 NCR1O76036 304 aa18.21■□□□□ 0.51
PKP3-211ENST00000534401 GYPBP06028 91 aa18.21■□□□□ 0.51
PKP3-211ENST00000534401 ZNF823P16415 610 aa18.21■□□□□ 0.51
PKP3-211ENST00000534401 GCH1P30793 250 aa18.21■□□□□ 0.51
PKP3-211ENST00000534401 LIPAP38571 399 aa18.21■□□□□ 0.51
PKP3-211ENST00000534401 CRISP1P54107 249 aa18.21■□□□□ 0.51
PKP3-211ENST00000534401 PSG7Q13046 419 aa18.21■□□□□ 0.51
PKP3-211ENST00000534401 NKPD1Q17RQ9 610 aa18.21■□□□□ 0.51
PKP3-211ENST00000534401 PCGF3Q3KNV8 242 aa18.21■□□□□ 0.51
PKP3-211ENST00000534401 KDM4DQ6B0I6 523 aa18.21■□□□□ 0.51
PKP3-211ENST00000534401 FBXW12Q6X9E4 464 aa18.21■□□□□ 0.51
PKP3-211ENST00000534401 ZNF511Q8NB15 262 aa18.21■□□□□ 0.51
PKP3-211ENST00000534401 OR51L1Q8NGJ5 315 aa18.21■□□□□ 0.51
PKP3-211ENST00000534401 OR2AJ1Q8NGZ0 328 aa18.21■□□□□ 0.51
PKP3-211ENST00000534401 HAVCR1Q96D42 359 aa18.21■□□□□ 0.51
PKP3-211ENST00000534401 CDADC1Q9BWV3 514 aa18.21■□□□□ 0.51
PKP3-211ENST00000534401 C1QTNF5Q9BXJ0 243 aa18.21■□□□□ 0.51
PKP3-211ENST00000534401 WDR76Q9H967 626 aa18.21■□□□□ 0.51
PKP3-211ENST00000534401 PAPOLBQ9NRJ5 636 aaKnown RBP18.21■□□□□ 0.51
PKP3-211ENST00000534401 TVP23AA6NH52 213 aa18.2■□□□□ 0.5
PKP3-211ENST00000534401 HLA-DQA2P01906 255 aa18.2■□□□□ 0.5
PKP3-211ENST00000534401 ACSM4P0C7M7 580 aa18.2■□□□□ 0.5
PKP3-211ENST00000534401 POU1F1P28069 291 aa18.2■□□□□ 0.5
PKP3-211ENST00000534401 ENTPD1P49961 510 aa18.2■□□□□ 0.5
PKP3-211ENST00000534401 ESRRGP62508 458 aa18.2■□□□□ 0.5
PKP3-211ENST00000534401 ALKBH6Q3KRA9 238 aa18.2■□□□□ 0.5
PKP3-211ENST00000534401 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.2■□□□□ 0.5
PKP3-211ENST00000534401 ICA1LQ8NDH6 482 aa18.2■□□□□ 0.5
PKP3-211ENST00000534401 ZNF540Q8NDQ6 660 aa18.2■□□□□ 0.5
PKP3-211ENST00000534401 LRTOMTQ8WZ04 291 aa18.2■□□□□ 0.5
PKP3-211ENST00000534401 APOBEC3DQ96AK3 386 aaPredicted RBP18.2■□□□□ 0.5
PKP3-211ENST00000534401 ATF6BQ99941 703 aa18.2■□□□□ 0.5
PKP3-211ENST00000534401 PIMREGQ9BSJ6 248 aa18.2■□□□□ 0.5
PKP3-211ENST00000534401 MED20Q9H944 212 aa18.2■□□□□ 0.5
PKP3-211ENST00000534401 FAM183AA6NL82 134 aa18.19■□□□□ 0.5
PKP3-211ENST00000534401 G3V2T6 193 aa18.19■□□□□ 0.5
PKP3-211ENST00000534401 RP2O75695 350 aa18.19■□□□□ 0.5
PKP3-211ENST00000534401 GLCEO94923 617 aa18.19■□□□□ 0.5
PKP3-211ENST00000534401 TACSTD2P09758 323 aa18.19■□□□□ 0.5
PKP3-211ENST00000534401 RAC2P15153 192 aa18.19■□□□□ 0.5
PKP3-211ENST00000534401 USF1P22415 310 aaPredicted RBP18.19■□□□□ 0.5
PKP3-211ENST00000534401 COL8A2P25067 703 aa18.19■□□□□ 0.5
PKP3-211ENST00000534401 EFNB1P98172 346 aa18.19■□□□□ 0.5
PKP3-211ENST00000534401 FAM209AQ5JX71 171 aa18.19■□□□□ 0.5
PKP3-211ENST00000534401 MALRD1Q5VYJ5 2156 aa18.19■□□□□ 0.5
PKP3-211ENST00000534401 AMIGO2Q86SJ2 522 aa18.19■□□□□ 0.5
PKP3-211ENST00000534401 ST7LQ8TDW4 575 aa18.19■□□□□ 0.5
PKP3-211ENST00000534401 SNX33Q8WV41 574 aa18.19■□□□□ 0.5
PKP3-211ENST00000534401 GTF3AQ92664 365 aaKnown RBP18.19■□□□□ 0.5
PKP3-211ENST00000534401 RDH5Q92781 318 aa18.19■□□□□ 0.5
PKP3-211ENST00000534401 CENPNQ96H22 339 aaPredicted RBP18.19■□□□□ 0.5
PKP3-211ENST00000534401 PITX2Q99697 317 aa18.19■□□□□ 0.5
PKP3-211ENST00000534401 CYSLTR2Q9NS75 346 aa18.19■□□□□ 0.5
PKP3-211ENST00000534401 PURGQ9UJV8 347 aaKnown RBP18.19■□□□□ 0.5
PKP3-211ENST00000534401 ABCA2Q9BZC7 2435 aa18.18■□□□□ 0.5
PKP3-211ENST00000534401 CD5LO43866 347 aa18.18■□□□□ 0.5
PKP3-211ENST00000534401 SLC2A5P22732 501 aa18.18■□□□□ 0.5
PKP3-211ENST00000534401 RPS27P42677 84 aaKnown RBP18.18■□□□□ 0.5
PKP3-211ENST00000534401 MAGEB1P43366 347 aa18.18■□□□□ 0.5
PKP3-211ENST00000534401 CDK5R2Q13319 367 aa18.18■□□□□ 0.5
PKP3-211ENST00000534401 TMEM249Q2WGJ8 235 aa18.18■□□□□ 0.5
PKP3-211ENST00000534401 TMEM154Q6P9G4 183 aa18.18■□□□□ 0.5
PKP3-211ENST00000534401 ZDHHC13Q8IUH4 622 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms