RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 BOD1Q96IK1 185 aa16.86■□□□□ 0.29
USP39-218ENST00000493829 MED18Q9BUE0 208 aa16.86■□□□□ 0.29
USP39-218ENST00000493829 BRD7Q9NPI1 651 aa16.86■□□□□ 0.29
USP39-218ENST00000493829 GTF2A1LQ9UNN4 478 aa16.86■□□□□ 0.29
USP39-218ENST00000493829 CAB39Q9Y376 341 aaPredicted RBP16.86■□□□□ 0.29
USP39-218ENST00000493829 N6AMT1Q9Y5N5 214 aa16.86■□□□□ 0.29
USP39-218ENST00000493829 PNMA8CA0A1B0GUJ8 204 aa16.85■□□□□ 0.29
USP39-218ENST00000493829 IQCMA0A1B0GVH7 501 aa16.85■□□□□ 0.29
USP39-218ENST00000493829 OR6C6A6NF89 314 aa16.85■□□□□ 0.29
USP39-218ENST00000493829 F5H5K5 113 aa16.85■□□□□ 0.29
USP39-218ENST00000493829 MRPS14O60783 128 aaKnown RBP16.85■□□□□ 0.29
USP39-218ENST00000493829 ABHD16AO95870 558 aa16.85■□□□□ 0.29
USP39-218ENST00000493829 MT-ND5P03915 603 aa16.85■□□□□ 0.29
USP39-218ENST00000493829 AGAP20933 346 aa16.85■□□□□ 0.29
USP39-218ENST00000493829 PCMT1P22061 227 aa16.85■□□□□ 0.29
USP39-218ENST00000493829 RIDAP52758 137 aaKnown RBP16.85■□□□□ 0.29
USP39-218ENST00000493829 ROM1Q03395 351 aa16.85■□□□□ 0.29
USP39-218ENST00000493829 ALDH16A1Q8IZ83 802 aa16.85■□□□□ 0.29
USP39-218ENST00000493829 ZFP41Q8N8Y5 198 aa16.85■□□□□ 0.29
USP39-218ENST00000493829 OR52N1Q8NH53 320 aa16.85■□□□□ 0.29
USP39-218ENST00000493829 PELI1Q96FA3 418 aa16.85■□□□□ 0.29
USP39-218ENST00000493829 OBP2BQ9NPH6 170 aa16.85■□□□□ 0.29
USP39-218ENST00000493829 DDX28Q9NUL7 540 aaKnown RBP16.85■□□□□ 0.29
USP39-218ENST00000493829 LSM2Q9Y333 95 aaKnown RBP16.85■□□□□ 0.29
USP39-218ENST00000493829 E9PI62 339 aa16.85■□□□□ 0.29
USP39-218ENST00000493829 M0R1B8 84 aa16.85■□□□□ 0.29
USP39-218ENST00000493829 LALBAP00709 142 aa16.85■□□□□ 0.29
USP39-218ENST00000493829 SLC2A1P11166 492 aa16.85■□□□□ 0.29
USP39-218ENST00000493829 HOXB1P14653 301 aaPredicted RBP16.85■□□□□ 0.29
USP39-218ENST00000493829 SLC6A9P48067 706 aa16.85■□□□□ 0.29
USP39-218ENST00000493829 CX3CR1P49238 355 aa16.85■□□□□ 0.29
USP39-218ENST00000493829 GTF2A1P52655 376 aaPredicted RBP16.85■□□□□ 0.29
USP39-218ENST00000493829 MFGE8Q08431 387 aaPredicted RBP16.85■□□□□ 0.29
USP39-218ENST00000493829 LIPNQ5VXI9 398 aa16.85■□□□□ 0.29
USP39-218ENST00000493829 RNLSQ5VYX0 342 aa16.85■□□□□ 0.29
USP39-218ENST00000493829 XAF1Q6GPH4 301 aa16.85■□□□□ 0.29
USP39-218ENST00000493829 SYS1Q8N2H4 156 aa16.85■□□□□ 0.29
USP39-218ENST00000493829 ZNF283Q8N7M2 679 aa16.85■□□□□ 0.29
USP39-218ENST00000493829 LINC01560Q8TB33 94 aa16.85■□□□□ 0.29
USP39-218ENST00000493829 HSD17B8Q92506 261 aa16.85■□□□□ 0.29
USP39-218ENST00000493829 WACQ9BTA9 647 aa16.85■□□□□ 0.29
USP39-218ENST00000493829 MRPS26Q9BYN8 205 aaKnown RBP16.85■□□□□ 0.29
USP39-218ENST00000493829 NPDC1Q9NQX5 325 aaPredicted RBP16.85■□□□□ 0.29
USP39-218ENST00000493829 NPAP1Q9NZP6 1156 aa16.85■□□□□ 0.29
USP39-218ENST00000493829 MYO18BQ8IUG5 2567 aa16.84■□□□□ 0.29
USP39-218ENST00000493829 C5orf49A4QMS7 147 aa16.84■□□□□ 0.29
USP39-218ENST00000493829 ZNF14P17017 642 aaPredicted RBP16.84■□□□□ 0.29
USP39-218ENST00000493829 STOMP27105 288 aa16.84■□□□□ 0.29
USP39-218ENST00000493829 PSMB9P28065 219 aa16.84■□□□□ 0.29
USP39-218ENST00000493829 GRB2P62993 217 aaKnown RBP16.84■□□□□ 0.29
USP39-218ENST00000493829 HGFACQ04756 655 aa16.84■□□□□ 0.29
USP39-218ENST00000493829 SRSF1Q07955 248 aaKnown RBP eCLIP16.84■□□□□ 0.293e-6■■■■■ 29.6
USP39-218ENST00000493829 P2RY8Q86VZ1 359 aa16.84■□□□□ 0.29
USP39-218ENST00000493829 SLC30A7Q8NEW0 376 aa16.84■□□□□ 0.29
USP39-218ENST00000493829 ZNF75AQ96N20 296 aa16.84■□□□□ 0.29
USP39-218ENST00000493829 WFIKKN1Q96NZ8 548 aa16.84■□□□□ 0.29
USP39-218ENST00000493829 COQ7Q99807 217 aa16.84■□□□□ 0.29
USP39-218ENST00000493829 CACNA1CQ13936 2221 aa16.84■□□□□ 0.29
USP39-218ENST00000493829 FLNCQ14315 2725 aa16.84■□□□□ 0.29
USP39-218ENST00000493829 LOC100509620A0A075B734 347 aa16.83■□□□□ 0.28
USP39-218ENST00000493829 J3QKU1 62 aa16.83■□□□□ 0.28
USP39-218ENST00000493829 SULT1C4O75897 302 aa16.83■□□□□ 0.28
USP39-218ENST00000493829 INMTO95050 263 aa16.83■□□□□ 0.28
USP39-218ENST00000493829 THBDP07204 575 aa16.83■□□□□ 0.28
USP39-218ENST00000493829 CBR1P16152 277 aa16.83■□□□□ 0.28
USP39-218ENST00000493829 APLNRP35414 380 aa16.83■□□□□ 0.28
USP39-218ENST00000493829 SPHARQ15513 63 aa16.83■□□□□ 0.28
USP39-218ENST00000493829 ZNF367Q7RTV3 350 aa16.83■□□□□ 0.28
USP39-218ENST00000493829 ZNF485Q8NCK3 441 aa16.83■□□□□ 0.28
USP39-218ENST00000493829 SPTSSAQ969W0 71 aa16.83■□□□□ 0.28
USP39-218ENST00000493829 OR51B6Q9H340 312 aa16.83■□□□□ 0.28
USP39-218ENST00000493829 VCX3AQ9NNX9 186 aa16.83■□□□□ 0.28
USP39-218ENST00000493829 IGHV1-18A0A0C4DH31 117 aa16.82■□□□□ 0.28
USP39-218ENST00000493829 CLPTM1O96005 669 aa16.82■□□□□ 0.28
USP39-218ENST00000493829 SERPINA5P05154 406 aa16.82■□□□□ 0.28
USP39-218ENST00000493829 TACSTD2P09758 323 aa16.82■□□□□ 0.28
USP39-218ENST00000493829 CECR9P0C854 216 aa16.82■□□□□ 0.28
USP39-218ENST00000493829 CRYGSP22914 178 aa16.82■□□□□ 0.28
USP39-218ENST00000493829 ANOS1P23352 680 aa16.82■□□□□ 0.28
USP39-218ENST00000493829 GDI2P50395 445 aaKnown RBP16.82■□□□□ 0.28
USP39-218ENST00000493829 GBX2P52951 348 aaPredicted RBP16.82■□□□□ 0.28
USP39-218ENST00000493829 NAA40Q86UY6 237 aa16.82■□□□□ 0.28
USP39-218ENST00000493829 PAQR4Q8N4S7 273 aaPredicted RBP16.82■□□□□ 0.28
USP39-218ENST00000493829 RORBQ92753 470 aa16.82■□□□□ 0.28
USP39-218ENST00000493829 MYCBPQ99417 103 aaPredicted RBP16.82■□□□□ 0.28
USP39-218ENST00000493829 KCNJ15Q99712 375 aa16.82■□□□□ 0.28
USP39-218ENST00000493829 TRIM36Q9NQ86 728 aa16.82■□□□□ 0.28
USP39-218ENST00000493829 SCOCQ9UIL1 159 aa16.82■□□□□ 0.28
USP39-218ENST00000493829 HCFC1P51610 2035 aa16.82■□□□□ 0.28
USP39-218ENST00000493829 C19orf84I3L1E1 186 aa16.81■□□□□ 0.28
USP39-218ENST00000493829 M0R135 149 aa16.81■□□□□ 0.28
USP39-218ENST00000493829 ZNF254O75437 659 aa16.81■□□□□ 0.28
USP39-218ENST00000493829 IGKV3-15P01624 115 aa16.81■□□□□ 0.28
USP39-218ENST00000493829 ANXA2P07355 339 aaKnown RBP16.81■□□□□ 0.28
USP39-218ENST00000493829 ZNF121P58317 390 aaPredicted RBP16.81■□□□□ 0.28
USP39-218ENST00000493829 PSMA6P60900 246 aaKnown RBP16.81■□□□□ 0.28
USP39-218ENST00000493829 ECH1Q13011 328 aa16.81■□□□□ 0.28
USP39-218ENST00000493829 ODF4Q2M2E3 257 aa16.81■□□□□ 0.28
USP39-218ENST00000493829 RSPO1Q2MKA7 263 aaPredicted RBP16.81■□□□□ 0.28
USP39-218ENST00000493829 SEZ6L2Q6UXD5 910 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms