RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 MAGEB4O15481 346 aaPredicted RBP15.7■□□□□ 0.1
SHANK1-201ENST00000293441 GPR12P47775 334 aa15.7■□□□□ 0.1
SHANK1-201ENST00000293441 ZNF573Q86YE8 665 aa15.7■□□□□ 0.1
SHANK1-201ENST00000293441 GCNT2Q8N0V5 402 aa15.7■□□□□ 0.1
SHANK1-201ENST00000293441 OR51S1Q8NGJ8 323 aa15.7■□□□□ 0.1
SHANK1-201ENST00000293441 NT5CQ8TCD5 201 aa15.7■□□□□ 0.1
SHANK1-201ENST00000293441 SARGQ9BW04 601 aa15.7■□□□□ 0.1
SHANK1-201ENST00000293441 ARV1Q9H2C2 271 aa15.7■□□□□ 0.1
SHANK1-201ENST00000293441 TRBV5-4A0A0C4DH59 114 aa15.7■□□□□ 0.1
SHANK1-201ENST00000293441 KIR2DS1A0A191URI9 304 aa15.7■□□□□ 0.1
SHANK1-201ENST00000293441 DVL1O14640 695 aa15.7■□□□□ 0.1
SHANK1-201ENST00000293441 HBE1P02100 147 aa15.7■□□□□ 0.1
SHANK1-201ENST00000293441 ZNF26P17031 533 aaPredicted RBP15.7■□□□□ 0.1
SHANK1-201ENST00000293441 CTGFP29279 349 aa15.7■□□□□ 0.1
SHANK1-201ENST00000293441 KIR2DS4P43632 304 aa15.7■□□□□ 0.1
SHANK1-201ENST00000293441 PPT1P50897 306 aa15.7■□□□□ 0.1
SHANK1-201ENST00000293441 SUB1P53999 127 aaKnown RBP eCLIP15.7■□□□□ 0.1
SHANK1-201ENST00000293441 DVL1P1P54792 670 aaPredicted RBP15.7■□□□□ 0.1
SHANK1-201ENST00000293441 KIR2DS1Q14954 304 aa15.7■□□□□ 0.1
SHANK1-201ENST00000293441 ADGRF3Q8IZF5 1079 aa15.7■□□□□ 0.1
SHANK1-201ENST00000293441 OR13F1Q8NGS4 319 aa15.7■□□□□ 0.1
SHANK1-201ENST00000293441 SLC23A1Q9UHI7 598 aa15.7■□□□□ 0.1
SHANK1-201ENST00000293441 A0A087WZY1 265 aa15.7■□□□□ 0.1
SHANK1-201ENST00000293441 OR2A25A4D2G3 310 aa15.7■□□□□ 0.1
SHANK1-201ENST00000293441 HNRNPFP52597 415 aaKnown RBP15.7■□□□□ 0.1
SHANK1-201ENST00000293441 UBAC2Q8NBM4 344 aa15.7■□□□□ 0.1
SHANK1-201ENST00000293441 MYO5AQ9Y4I1 1855 aaKnown RBP15.7■□□□□ 0.1
SHANK1-201ENST00000293441 CHRM2P08172 466 aa15.7■□□□□ 0.1
SHANK1-201ENST00000293441 HTR4Q13639 388 aa15.7■□□□□ 0.1
SHANK1-201ENST00000293441 ZNF718Q3SXZ3 478 aa15.7■□□□□ 0.1
SHANK1-201ENST00000293441 OR11G2Q8NGC1 345 aa15.7■□□□□ 0.1
SHANK1-201ENST00000293441 ATF6BQ99941 703 aa15.7■□□□□ 0.1
SHANK1-201ENST00000293441 C1orf87Q8N0U7 546 aa15.69■□□□□ 0.1
SHANK1-201ENST00000293441 SHISA8B8ZZ34 492 aa15.69■□□□□ 0.1
SHANK1-201ENST00000293441 SMLR1H3BR10 107 aa15.69■□□□□ 0.1
SHANK1-201ENST00000293441 F2RP25116 425 aa15.69■□□□□ 0.1
SHANK1-201ENST00000293441 C1orf210Q8IVY1 113 aa15.69■□□□□ 0.1
SHANK1-201ENST00000293441 OR2V1Q8NHB1 315 aa15.69■□□□□ 0.1
SHANK1-201ENST00000293441 SEC22CQ9BRL7 303 aa15.69■□□□□ 0.1
SHANK1-201ENST00000293441 ISYNA1Q9NPH2 558 aa15.69■□□□□ 0.1
SHANK1-201ENST00000293441 RBFOX1Q9NWB1 397 aaKnown RBP15.69■□□□□ 0.1
SHANK1-201ENST00000293441 COL22A1Q8NFW1 1626 aaPredicted RBP15.69■□□□□ 0.1
SHANK1-201ENST00000293441 TRABD2BA6NFA1 517 aa15.69■□□□□ 0.1
SHANK1-201ENST00000293441 VASH2Q86V25 355 aa15.69■□□□□ 0.1
SHANK1-201ENST00000293441 ZDHHC23Q8IYP9 409 aa15.69■□□□□ 0.1
SHANK1-201ENST00000293441 DRAXINQ8NBI3 349 aaPredicted RBP15.69■□□□□ 0.1
SHANK1-201ENST00000293441 ITPKCQ96DU7 683 aa15.69■□□□□ 0.1
SHANK1-201ENST00000293441 MBOAT4Q96T53 435 aa15.69■□□□□ 0.1
SHANK1-201ENST00000293441 SERGEFQ9UGK8 458 aa15.69■□□□□ 0.1
SHANK1-201ENST00000293441 FAM96BQ9Y3D0 163 aa15.69■□□□□ 0.1
SHANK1-201ENST00000293441 FAM221AA4D161 298 aa15.69■□□□□ 0.1
SHANK1-201ENST00000293441 M6PRP20645 277 aa15.69■□□□□ 0.1
SHANK1-201ENST00000293441 DSCR4P56555 118 aaPredicted RBP15.69■□□□□ 0.1
SHANK1-201ENST00000293441 DOC2BQ14184 412 aa15.69■□□□□ 0.1
SHANK1-201ENST00000293441 OPCMLQ14982 345 aa15.69■□□□□ 0.1
SHANK1-201ENST00000293441 SPATA46Q5T0L3 261 aa15.69■□□□□ 0.1
SHANK1-201ENST00000293441 TXN2Q99757 166 aa15.69■□□□□ 0.1
SHANK1-201ENST00000293441 C11orf54Q9H0W9 315 aaPredicted RBP15.69■□□□□ 0.1
SHANK1-201ENST00000293441 EXOSC3Q9NQT5 275 aaKnown RBP15.69■□□□□ 0.1
SHANK1-201ENST00000293441 BHLHE40O14503 412 aa15.69■□□□□ 0.1
SHANK1-201ENST00000293441 CCSO14618 274 aa15.69■□□□□ 0.1
SHANK1-201ENST00000293441 OR51A4Q8NGJ6 313 aa15.69■□□□□ 0.1
SHANK1-201ENST00000293441 SMOC1Q9H4F8 434 aa15.69■□□□□ 0.1
SHANK1-201ENST00000293441 KCNG2Q9UJ96 466 aa15.69■□□□□ 0.1
SHANK1-201ENST00000293441 XRCC2O43543 280 aa15.68■□□□□ 0.1
SHANK1-201ENST00000293441 CADM4Q8NFZ8 388 aa15.68■□□□□ 0.1
SHANK1-201ENST00000293441 TTC3P53804 2025 aa15.68■□□□□ 0.1
SHANK1-201ENST00000293441 ZNF705GA8MUZ8 300 aaPredicted RBP15.68■□□□□ 0.1
SHANK1-201ENST00000293441 HOXD11P31277 338 aaPredicted RBP15.68■□□□□ 0.1
SHANK1-201ENST00000293441 CASP3P42574 277 aa15.68■□□□□ 0.1
SHANK1-201ENST00000293441 ZNF628Q5EBL2 1059 aa15.68■□□□□ 0.1
SHANK1-201ENST00000293441 DND1Q8IYX4 353 aaKnown RBP15.68■□□□□ 0.1
SHANK1-201ENST00000293441 PBOV1Q9GZY1 135 aa15.68■□□□□ 0.1
SHANK1-201ENST00000293441 SPNS1Q9H2V7 528 aa15.68■□□□□ 0.1
SHANK1-201ENST00000293441 TXNIPQ9H3M7 391 aa15.68■□□□□ 0.1
SHANK1-201ENST00000293441 MTCH1Q9NZJ7 389 aa15.68■□□□□ 0.1
SHANK1-201ENST00000293441 TRGV5A0A0B4J1U4 118 aa15.68■□□□□ 0.1
SHANK1-201ENST00000293441 ALOX5APP20292 161 aa15.68■□□□□ 0.1
SHANK1-201ENST00000293441 PRPH2P23942 346 aa15.68■□□□□ 0.1
SHANK1-201ENST00000293441 ELLP55199 621 aaPredicted RBP15.68■□□□□ 0.1
SHANK1-201ENST00000293441 ZNF266Q14584 549 aa15.68■□□□□ 0.1
SHANK1-201ENST00000293441 ZNF766Q5HY98 468 aa15.68■□□□□ 0.1
SHANK1-201ENST00000293441 TP53I13Q8NBR0 393 aaPredicted RBP15.68■□□□□ 0.1
SHANK1-201ENST00000293441 OR6K3Q8NGY3 331 aa15.68■□□□□ 0.1
SHANK1-201ENST00000293441 SPACA1Q9HBV2 294 aa15.68■□□□□ 0.1
SHANK1-201ENST00000293441 RPS10-NUDT3A0A1W2PQS6 291 aa15.68■□□□□ 0.1
SHANK1-201ENST00000293441 F6UZH7 168 aa15.68■□□□□ 0.1
SHANK1-201ENST00000293441 SIX6O95475 246 aa15.68■□□□□ 0.1
SHANK1-201ENST00000293441 PMS2P2O95744 297 aa15.68■□□□□ 0.1
SHANK1-201ENST00000293441 CRYABP02511 175 aaKnown RBP15.68■□□□□ 0.1
SHANK1-201ENST00000293441 CDAP32320 146 aa15.68■□□□□ 0.1
SHANK1-201ENST00000293441 RPS10P46783 165 aaKnown RBP15.68■□□□□ 0.1
SHANK1-201ENST00000293441 B4GALNT1Q00973 533 aa15.68■□□□□ 0.1
SHANK1-201ENST00000293441 FZD2Q14332 565 aa15.68■□□□□ 0.1
SHANK1-201ENST00000293441 SHBQ15464 509 aa15.68■□□□□ 0.1
SHANK1-201ENST00000293441 RTL8BQ17RB0 113 aa15.68■□□□□ 0.1
SHANK1-201ENST00000293441 ZNF2Q9BSG1 426 aaPredicted RBP15.68■□□□□ 0.1
SHANK1-201ENST00000293441 WNT16Q9UBV4 365 aa15.68■□□□□ 0.1
SHANK1-201ENST00000293441 RPS19P39019 145 aaKnown RBP15.68■□□□□ 0.1
SHANK1-201ENST00000293441 ANKRD53Q8N9V6 530 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms