RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 LINC01590Q5TEZ4 76 aa12.39□□□□□ -0.43
SCARB2-227ENST00000640957 CCL4L1Q8NHW4 92 aa12.39□□□□□ -0.43
SCARB2-227ENST00000640957 GPR148Q8TDV2 347 aa12.39□□□□□ -0.43
SCARB2-227ENST00000640957 TGM7Q96PF1 710 aa12.39□□□□□ -0.43
SCARB2-227ENST00000640957 GGACTQ9BVM4 153 aa12.39□□□□□ -0.43
SCARB2-227ENST00000640957 EIF5A2Q9GZV4 153 aaKnown RBP12.39□□□□□ -0.43
SCARB2-227ENST00000640957 UPB1Q9UBR1 384 aa12.39□□□□□ -0.43
SCARB2-227ENST00000640957 OR4C45A6NMZ5 311 aa12.39□□□□□ -0.43
SCARB2-227ENST00000640957 STK17BO94768 372 aa12.39□□□□□ -0.43
SCARB2-227ENST00000640957 EML2O95834 649 aa12.39□□□□□ -0.43
SCARB2-227ENST00000640957 IGKV1D-16P01601 117 aa12.39□□□□□ -0.43
SCARB2-227ENST00000640957 SPARCP09486 303 aa12.39□□□□□ -0.43
SCARB2-227ENST00000640957 EIF1AXP47813 144 aaKnown RBP12.39□□□□□ -0.43
SCARB2-227ENST00000640957 GPM6BQ13491 265 aa12.39□□□□□ -0.43
SCARB2-227ENST00000640957 PAPD4Q6PIY7 484 aaKnown RBP12.39□□□□□ -0.43
SCARB2-227ENST00000640957 ZNF813Q6ZN06 617 aa12.39□□□□□ -0.43
SCARB2-227ENST00000640957 RNF144BQ7Z419 303 aa12.39□□□□□ -0.43
SCARB2-227ENST00000640957 TRAPPC6BQ86SZ2 158 aa12.39□□□□□ -0.43
SCARB2-227ENST00000640957 OR10H5Q8NGA6 315 aa12.39□□□□□ -0.43
SCARB2-227ENST00000640957 OR52R1Q8NGF1 315 aa12.39□□□□□ -0.43
SCARB2-227ENST00000640957 OR4C3Q8NH37 302 aa12.39□□□□□ -0.43
SCARB2-227ENST00000640957 WFIKKN2Q8TEU8 576 aa12.39□□□□□ -0.43
SCARB2-227ENST00000640957 METTL8Q9H825 291 aaKnown RBP12.39□□□□□ -0.43
SCARB2-227ENST00000640957 UNKLQ9H9P5 680 aaKnown RBP12.39□□□□□ -0.43
SCARB2-227ENST00000640957 SPACA1Q9HBV2 294 aa12.39□□□□□ -0.43
SCARB2-227ENST00000640957 SMCO4Q9NRQ5 59 aa12.39□□□□□ -0.43
SCARB2-227ENST00000640957 ADAM29Q9UKF5 820 aa12.39□□□□□ -0.43
SCARB2-227ENST00000640957 ENTPD2Q9Y5L3 495 aa12.39□□□□□ -0.43
SCARB2-227ENST00000640957 MPZL1O95297 269 aa12.38□□□□□ -0.43
SCARB2-227ENST00000640957 SCGB1D2O95969 90 aa12.38□□□□□ -0.43
SCARB2-227ENST00000640957 CD74P04233 296 aa12.38□□□□□ -0.43
SCARB2-227ENST00000640957 KIR3DL2P43630 455 aa12.38□□□□□ -0.43
SCARB2-227ENST00000640957 RPS10P46783 165 aaKnown RBP12.38□□□□□ -0.43
SCARB2-227ENST00000640957 MECP2P51608 486 aaKnown RBP12.38□□□□□ -0.43
SCARB2-227ENST00000640957 NFATC4Q14934 902 aa12.38□□□□□ -0.43
SCARB2-227ENST00000640957 MPPED2Q15777 294 aa12.38□□□□□ -0.43
SCARB2-227ENST00000640957 CST6Q15828 149 aa12.38□□□□□ -0.43
SCARB2-227ENST00000640957 DEFB110Q30KQ9 67 aa12.38□□□□□ -0.43
SCARB2-227ENST00000640957 ASPHD2Q6ICH7 369 aa12.38□□□□□ -0.43
SCARB2-227ENST00000640957 OR2A2Q6IF42 318 aa12.38□□□□□ -0.43
SCARB2-227ENST00000640957 VN1R4Q7Z5H5 301 aa12.38□□□□□ -0.43
SCARB2-227ENST00000640957 FJX1Q86VR8 437 aa12.38□□□□□ -0.43
SCARB2-227ENST00000640957 GPX8Q8TED1 209 aa12.38□□□□□ -0.43
SCARB2-227ENST00000640957 SLC25A36Q96CQ1 311 aa12.38□□□□□ -0.43
SCARB2-227ENST00000640957 HHIPL1Q96JK4 782 aa12.38□□□□□ -0.43
SCARB2-227ENST00000640957 SPACA7Q96KW9 195 aa12.38□□□□□ -0.43
SCARB2-227ENST00000640957 PHB2Q99623 299 aa12.38□□□□□ -0.43
SCARB2-227ENST00000640957 NRSN2Q9GZP1 204 aa12.38□□□□□ -0.43
SCARB2-227ENST00000640957 RSPH9Q9H1X1 276 aaPredicted RBP12.38□□□□□ -0.43
SCARB2-227ENST00000640957 IL23AQ9NPF7 189 aa12.38□□□□□ -0.43
SCARB2-227ENST00000640957 MKKSQ9NPJ1 570 aaPredicted RBP12.38□□□□□ -0.43
SCARB2-227ENST00000640957 GPR34Q9UPC5 381 aa12.38□□□□□ -0.43
SCARB2-227ENST00000640957 RCL1Q9Y2P8 373 aaKnown RBP12.38□□□□□ -0.43
SCARB2-227ENST00000640957 LINC01553A4QN01 128 aa12.38□□□□□ -0.43
SCARB2-227ENST00000640957 URADA6NGE7 173 aa12.38□□□□□ -0.43
SCARB2-227ENST00000640957 SDCBPO00560 298 aaPredicted RBP12.38□□□□□ -0.43
SCARB2-227ENST00000640957 SRPX2O60687 465 aaPredicted RBP12.38□□□□□ -0.43
SCARB2-227ENST00000640957 CTSBP07858 339 aa12.38□□□□□ -0.43
SCARB2-227ENST00000640957 JMJD7P0C870 316 aa12.38□□□□□ -0.43
SCARB2-227ENST00000640957 NDUFB7P17568 137 aa12.38□□□□□ -0.43
SCARB2-227ENST00000640957 EN2P19622 333 aaPredicted RBP12.38□□□□□ -0.43
SCARB2-227ENST00000640957 ACKR3P25106 362 aa12.38□□□□□ -0.43
SCARB2-227ENST00000640957 MAPK3P27361 379 aaPredicted RBP12.38□□□□□ -0.43
SCARB2-227ENST00000640957 PMPCAQ10713 525 aa12.38□□□□□ -0.43
SCARB2-227ENST00000640957 ELOCQ15369 112 aa12.38□□□□□ -0.43
SCARB2-227ENST00000640957 GFI1BQ5VTD9 330 aa12.38□□□□□ -0.43
SCARB2-227ENST00000640957 UQCC3Q6UW78 93 aa12.38□□□□□ -0.43
SCARB2-227ENST00000640957 ZNF550Q7Z398 422 aa12.38□□□□□ -0.43
SCARB2-227ENST00000640957 SFTPA2Q8IWL1 248 aa12.38□□□□□ -0.43
SCARB2-227ENST00000640957 MARS2Q96GW9 593 aaKnown RBP12.38□□□□□ -0.43
SCARB2-227ENST00000640957 RNF126Q9BV68 326 aa12.38□□□□□ -0.43
SCARB2-227ENST00000640957 SEC11CQ9BY50 192 aa12.38□□□□□ -0.43
SCARB2-227ENST00000640957 FBXO7Q9Y3I1 522 aa12.38□□□□□ -0.43
SCARB2-227ENST00000640957 LOC101059948A0A1B0GTJ6 334 aa12.38□□□□□ -0.43
SCARB2-227ENST00000640957 C7orf77A4D0Y5 90 aa12.38□□□□□ -0.43
SCARB2-227ENST00000640957 ZNF727A8MUV8 499 aa12.38□□□□□ -0.43
SCARB2-227ENST00000640957 TACSTD2P09758 323 aa12.38□□□□□ -0.43
SCARB2-227ENST00000640957 FAM157CP0CG43 387 aa12.38□□□□□ -0.43
SCARB2-227ENST00000640957 ACAA2P42765 397 aaKnown RBP12.38□□□□□ -0.43
SCARB2-227ENST00000640957 C1QL3Q5VWW1 255 aa12.38□□□□□ -0.43
SCARB2-227ENST00000640957 Q6ZRG5 221 aa12.38□□□□□ -0.43
SCARB2-227ENST00000640957 METTL27Q8N6F8 245 aaPredicted RBP12.38□□□□□ -0.43
SCARB2-227ENST00000640957 MRGPRFQ96AM1 343 aa12.38□□□□□ -0.43
SCARB2-227ENST00000640957 BSCL2Q96G97 398 aaPredicted RBP12.38□□□□□ -0.43
SCARB2-227ENST00000640957 ZNF587Q96SQ5 575 aaPredicted RBP12.38□□□□□ -0.43
SCARB2-227ENST00000640957 SRMSQ9H3Y6 488 aa12.38□□□□□ -0.43
SCARB2-227ENST00000640957 PUS1Q9Y606 427 aaKnown RBP eCLIP12.38□□□□□ -0.43
SCARB2-227ENST00000640957 RFNGQ9Y644 331 aa12.38□□□□□ -0.43
SCARB2-227ENST00000640957 A0A1B0GTI1 187 aa12.37□□□□□ -0.43
SCARB2-227ENST00000640957 CD8AP01732 235 aa12.37□□□□□ -0.43
SCARB2-227ENST00000640957 IFNA6P05013 189 aa12.37□□□□□ -0.43
SCARB2-227ENST00000640957 ZNF735P0CB33 412 aa12.37□□□□□ -0.43
SCARB2-227ENST00000640957 MFGE8Q08431 387 aaPredicted RBP12.37□□□□□ -0.43
SCARB2-227ENST00000640957 ACTBL2Q562R1 376 aa12.37□□□□□ -0.43
SCARB2-227ENST00000640957 LYG2Q86SG7 212 aa12.37□□□□□ -0.43
SCARB2-227ENST00000640957 PNLDC1Q8NA58 520 aaKnown RBP12.37□□□□□ -0.43
SCARB2-227ENST00000640957 SLAMF9Q96A28 289 aa12.37□□□□□ -0.43
SCARB2-227ENST00000640957 CARHSP1Q9Y2V2 147 aaKnown RBP12.37□□□□□ -0.43
SCARB2-227ENST00000640957 TICRRQ7Z2Z1 1910 aa12.37□□□□□ -0.43
SCARB2-227ENST00000640957 LOC100289279A0A1B0GTE1 492 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms