RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 FAM168AQ92567 244 aa12.39□□□□□ -0.43
MKS1-207ENST00000578789 MARS2Q96GW9 593 aaKnown RBP12.39□□□□□ -0.43
MKS1-207ENST00000578789 C4orf45Q96LM5 186 aa12.39□□□□□ -0.43
MKS1-207ENST00000578789 DCLRE1CQ96SD1 692 aaKnown RBP12.39□□□□□ -0.43
MKS1-207ENST00000578789 COQ7Q99807 217 aa12.39□□□□□ -0.43
MKS1-207ENST00000578789 REG4Q9BYZ8 158 aa12.39□□□□□ -0.43
MKS1-207ENST00000578789 HDHD2Q9H0R4 259 aa12.39□□□□□ -0.43
MKS1-207ENST00000578789 MS4A5Q9H3V2 200 aa12.39□□□□□ -0.43
MKS1-207ENST00000578789 GSX1Q9H4S2 264 aaPredicted RBP12.39□□□□□ -0.43
MKS1-207ENST00000578789 ZNF556Q9HAH1 456 aa12.39□□□□□ -0.43
MKS1-207ENST00000578789 ELOVL3Q9HB03 270 aa12.39□□□□□ -0.43
MKS1-207ENST00000578789 TBCCD1Q9NVR7 557 aa12.39□□□□□ -0.43
MKS1-207ENST00000578789 CYB5R1Q9UHQ9 305 aa12.39□□□□□ -0.43
MKS1-207ENST00000578789 DUSP13Q9UII6 198 aa12.39□□□□□ -0.43
MKS1-207ENST00000578789 AP4S1Q9Y587 144 aa12.39□□□□□ -0.43
MKS1-207ENST00000578789 RIIAD1A6NNX1 92 aa12.38□□□□□ -0.43
MKS1-207ENST00000578789 RNF223E7ERA6 249 aa12.38□□□□□ -0.43
MKS1-207ENST00000578789 J3QW42 95 aa12.38□□□□□ -0.43
MKS1-207ENST00000578789 EBAG9O00559 213 aa12.38□□□□□ -0.43
MKS1-207ENST00000578789 SMAD7O15105 426 aaKnown RBP12.38□□□□□ -0.43
MKS1-207ENST00000578789 ABHD16AO95870 558 aa12.38□□□□□ -0.43
MKS1-207ENST00000578789 CLPTM1O96005 669 aa12.38□□□□□ -0.43
MKS1-207ENST00000578789 IGHV3-13P01766 116 aa12.38□□□□□ -0.43
MKS1-207ENST00000578789 FCGR1AP12314 374 aa12.38□□□□□ -0.43
MKS1-207ENST00000578789 SLC25A16P16260 332 aa12.38□□□□□ -0.43
MKS1-207ENST00000578789 ZNF3P17036 446 aa12.38□□□□□ -0.43
MKS1-207ENST00000578789 SPI1P17947 270 aa12.38□□□□□ -0.43
MKS1-207ENST00000578789 ALDH3B1P43353 468 aa12.38□□□□□ -0.43
MKS1-207ENST00000578789 PDLIM4P50479 330 aa12.38□□□□□ -0.43
MKS1-207ENST00000578789 SELENOVP59797 346 aa12.38□□□□□ -0.43
MKS1-207ENST00000578789 CDK5Q00535 292 aa12.38□□□□□ -0.43
MKS1-207ENST00000578789 MAD2L1BPQ15013 274 aaPredicted RBP12.38□□□□□ -0.43
MKS1-207ENST00000578789 KRTAP27-1Q3LI81 207 aa12.38□□□□□ -0.43
MKS1-207ENST00000578789 ZNF718Q3SXZ3 478 aa12.38□□□□□ -0.43
MKS1-207ENST00000578789 ELFN2Q5R3F8 820 aa12.38□□□□□ -0.43
MKS1-207ENST00000578789 ARL9Q6T311 187 aa12.38□□□□□ -0.43
MKS1-207ENST00000578789 CFAP77Q6ZQR2 320 aa12.38□□□□□ -0.43
MKS1-207ENST00000578789 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.38□□□□□ -0.43
MKS1-207ENST00000578789 ZCCHC24Q8N2G6 241 aaKnown RBP12.38□□□□□ -0.43
MKS1-207ENST00000578789 PARP8Q8N3A8 854 aa12.38□□□□□ -0.43
MKS1-207ENST00000578789 ATG16L2Q8NAA4 619 aa12.38□□□□□ -0.43
MKS1-207ENST00000578789 ICA1LQ8NDH6 482 aa12.38□□□□□ -0.43
MKS1-207ENST00000578789 OR9Q1Q8NGQ5 310 aa12.38□□□□□ -0.43
MKS1-207ENST00000578789 ABHD4Q8TB40 342 aa12.38□□□□□ -0.43
MKS1-207ENST00000578789 SLC25A40Q8TBP6 338 aa12.38□□□□□ -0.43
MKS1-207ENST00000578789 ZNRF4Q8WWF5 429 aa12.38□□□□□ -0.43
MKS1-207ENST00000578789 IPCEF1Q8WWN9 437 aaPredicted RBP12.38□□□□□ -0.43
MKS1-207ENST00000578789 SMR3AQ99954 134 aa12.38□□□□□ -0.43
MKS1-207ENST00000578789 GABARAPL1Q9H0R8 117 aa12.38□□□□□ -0.43
MKS1-207ENST00000578789 SLC25A19Q9HC21 320 aa12.38□□□□□ -0.43
MKS1-207ENST00000578789 SLCO1C1Q9NYB5 712 aa12.38□□□□□ -0.43
MKS1-207ENST00000578789 GPR160Q9UJ42 338 aa12.38□□□□□ -0.43
MKS1-207ENST00000578789 MTORP42345 2549 aa12.38□□□□□ -0.43
MKS1-207ENST00000578789 VWC2LB2RUY7 222 aa12.37□□□□□ -0.43
MKS1-207ENST00000578789 NDUFS8O00217 210 aa12.37□□□□□ -0.43
MKS1-207ENST00000578789 NGFP01138 241 aa12.37□□□□□ -0.43
MKS1-207ENST00000578789 HLA-DQA2P01906 255 aa12.37□□□□□ -0.43
MKS1-207ENST00000578789 HEXAP06865 529 aa12.37□□□□□ -0.43
MKS1-207ENST00000578789 TUBG1P23258 451 aa12.37□□□□□ -0.43
MKS1-207ENST00000578789 FASP25445 335 aa12.37□□□□□ -0.43
MKS1-207ENST00000578789 ACTR3P61158 418 aa12.37□□□□□ -0.43
MKS1-207ENST00000578789 PPP1CBP62140 327 aa12.37□□□□□ -0.43
MKS1-207ENST00000578789 GINS1Q14691 196 aa12.37□□□□□ -0.43
MKS1-207ENST00000578789 TMEM255AQ5JRV8 349 aa12.37□□□□□ -0.43
MKS1-207ENST00000578789 SPATA46Q5T0L3 261 aa12.37□□□□□ -0.43
MKS1-207ENST00000578789 ACSM5Q6NUN0 579 aa12.37□□□□□ -0.43
MKS1-207ENST00000578789 CORO6Q6QEF8 472 aa12.37□□□□□ -0.43
MKS1-207ENST00000578789 HIPK1Q86Z02 1210 aa12.37□□□□□ -0.43
MKS1-207ENST00000578789 LINC00346Q8IVM7 164 aa12.37□□□□□ -0.43
MKS1-207ENST00000578789 SLC7A6Q92536 515 aa12.37□□□□□ -0.43
MKS1-207ENST00000578789 OR2J1Q9GZK6 312 aa12.37□□□□□ -0.43
MKS1-207ENST00000578789 TPK1Q9H3S4 243 aa12.37□□□□□ -0.43
MKS1-207ENST00000578789 PNRC2Q9NPJ4 139 aaKnown RBP12.37□□□□□ -0.43
MKS1-207ENST00000578789 TUBG2Q9NRH3 451 aa12.37□□□□□ -0.43
MKS1-207ENST00000578789 PAPOLBQ9NRJ5 636 aaKnown RBP12.37□□□□□ -0.43
MKS1-207ENST00000578789 TAAR3PQ9P1P4 343 aa12.37□□□□□ -0.43
MKS1-207ENST00000578789 KIF17Q9P2E2 1029 aa12.37□□□□□ -0.43
MKS1-207ENST00000578789 COMMD3-BMI1R4GMX3 469 aa12.37□□□□□ -0.43
MKS1-207ENST00000578789 LOC390937A0A1W2PQ73 354 aa12.36□□□□□ -0.43
MKS1-207ENST00000578789 TVP23AA6NH52 213 aa12.36□□□□□ -0.43
MKS1-207ENST00000578789 SURF4O15260 269 aa12.36□□□□□ -0.43
MKS1-207ENST00000578789 HMGN1P05114 100 aa12.36□□□□□ -0.43
MKS1-207ENST00000578789 DBHP09172 617 aa12.36□□□□□ -0.43
MKS1-207ENST00000578789 PSKH1P11801 424 aa12.36□□□□□ -0.43
MKS1-207ENST00000578789 DAOP14920 347 aa12.36□□□□□ -0.43
MKS1-207ENST00000578789 POU1F1P28069 291 aa12.36□□□□□ -0.43
MKS1-207ENST00000578789 GCH1P30793 250 aa12.36□□□□□ -0.43
MKS1-207ENST00000578789 MPV17P39210 176 aa12.36□□□□□ -0.43
MKS1-207ENST00000578789 RGS6P49758 472 aa12.36□□□□□ -0.43
MKS1-207ENST00000578789 DAPP51397 102 aa12.36□□□□□ -0.43
MKS1-207ENST00000578789 BLVRAP53004 296 aa12.36□□□□□ -0.43
MKS1-207ENST00000578789 KRTAP1-1Q07627 177 aa12.36□□□□□ -0.43
MKS1-207ENST00000578789 LOXL1Q08397 574 aaPredicted RBP12.36□□□□□ -0.43
MKS1-207ENST00000578789 ECH1Q13011 328 aa12.36□□□□□ -0.43
MKS1-207ENST00000578789 MOGQ16653 247 aa12.36□□□□□ -0.43
MKS1-207ENST00000578789 PCK2Q16822 640 aa12.36□□□□□ -0.43
MKS1-207ENST00000578789 NKPD1Q17RQ9 610 aa12.36□□□□□ -0.43
MKS1-207ENST00000578789 LINC01590Q5TEZ4 76 aa12.36□□□□□ -0.43
MKS1-207ENST00000578789 CLEC9AQ6UXN8 241 aa12.36□□□□□ -0.43
MKS1-207ENST00000578789 OR51L1Q8NGJ5 315 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms