RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 RPP25Q9BUL9 199 aaKnown RBP15.73■□□□□ 0.11
SHANK1-201ENST00000293441 ARID1BQ8NFD5 2236 aaPredicted RBP15.73■□□□□ 0.11
SHANK1-201ENST00000293441 SRP9P49458 86 aaKnown RBP15.73■□□□□ 0.11
SHANK1-201ENST00000293441 RAB13P51153 203 aa15.73■□□□□ 0.11
SHANK1-201ENST00000293441 SSTP61278 116 aa15.73■□□□□ 0.11
SHANK1-201ENST00000293441 ZFP82Q8N141 532 aa15.73■□□□□ 0.11
SHANK1-201ENST00000293441 LINC00615Q96LM1 132 aaPredicted RBP15.73■□□□□ 0.11
SHANK1-201ENST00000293441 UBE2KP61086 200 aa15.73■□□□□ 0.11
SHANK1-201ENST00000293441 LAIR1Q6GTX8 287 aa15.73■□□□□ 0.11
SHANK1-201ENST00000293441 CISD2Q8N5K1 135 aaKnown RBP15.73■□□□□ 0.11
SHANK1-201ENST00000293441 NANOGP1Q8N7R0 232 aa15.73■□□□□ 0.11
SHANK1-201ENST00000293441 NANPQ8TBE9 248 aa15.73■□□□□ 0.11
SHANK1-201ENST00000293441 IER2Q9BTL4 223 aa15.73■□□□□ 0.11
SHANK1-201ENST00000293441 WSB2Q9NYS7 404 aaPredicted RBP15.73■□□□□ 0.11
SHANK1-201ENST00000293441 NRASP01111 189 aa15.73■□□□□ 0.11
SHANK1-201ENST00000293441 LAP3P28838 519 aa15.73■□□□□ 0.11
SHANK1-201ENST00000293441 HIST2H3PS2Q5TEC6 136 aa15.73■□□□□ 0.11
SHANK1-201ENST00000293441 ACSM5Q6NUN0 579 aa15.73■□□□□ 0.11
SHANK1-201ENST00000293441 TFAP2EQ6VUC0 442 aa15.73■□□□□ 0.11
SHANK1-201ENST00000293441 RBMS3Q6XE24 437 aaKnown RBP15.73■□□□□ 0.11
SHANK1-201ENST00000293441 CMTM2Q8TAZ6 248 aa15.73■□□□□ 0.11
SHANK1-201ENST00000293441 MRGPRX4Q96LA9 322 aa15.73■□□□□ 0.11
SHANK1-201ENST00000293441 PUS1Q9Y606 427 aaKnown RBP eCLIP15.73■□□□□ 0.11
SHANK1-201ENST00000293441 SLCO1B1Q9Y6L6 691 aa15.73■□□□□ 0.11
SHANK1-201ENST00000293441 ANKRD61A6NGH8 418 aa15.72■□□□□ 0.11
SHANK1-201ENST00000293441 RPS2P15880 293 aaKnown RBP15.72■□□□□ 0.11
SHANK1-201ENST00000293441 RAC1P63000 192 aa15.72■□□□□ 0.11
SHANK1-201ENST00000293441 OR2B11Q5JQS5 317 aa15.72■□□□□ 0.11
SHANK1-201ENST00000293441 NAA40Q86UY6 237 aa15.72■□□□□ 0.11
SHANK1-201ENST00000293441 OPALINQ96PE5 141 aa15.72■□□□□ 0.11
SHANK1-201ENST00000293441 SLCO5A1Q9H2Y9 848 aa15.72■□□□□ 0.11
SHANK1-201ENST00000293441 PLA2G3Q9NZ20 509 aa15.72■□□□□ 0.11
SHANK1-201ENST00000293441 LRP5LA4QPB2 252 aa15.72■□□□□ 0.11
SHANK1-201ENST00000293441 B4GALT3O60512 393 aa15.72■□□□□ 0.11
SHANK1-201ENST00000293441 OR10J4P0C629 311 aa15.72■□□□□ 0.11
SHANK1-201ENST00000293441 PNLIPRP2P54317 469 aa15.72■□□□□ 0.11
SHANK1-201ENST00000293441 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.72■□□□□ 0.11
SHANK1-201ENST00000293441 ZNF620Q6ZNG0 422 aa15.72■□□□□ 0.11
SHANK1-201ENST00000293441 SPACA5Q96QH8 159 aa15.72■□□□□ 0.11
SHANK1-201ENST00000293441 GPR84Q9NQS5 396 aa15.72■□□□□ 0.11
SHANK1-201ENST00000293441 CRYM-AS1A6NIL9 109 aa15.72■□□□□ 0.11
SHANK1-201ENST00000293441 MPLP40238 635 aa15.72■□□□□ 0.11
SHANK1-201ENST00000293441 PRAMEF5Q5TYX0 476 aa15.72■□□□□ 0.11
SHANK1-201ENST00000293441 PRAMEF6Q5VXH4 476 aa15.72■□□□□ 0.11
SHANK1-201ENST00000293441 OR2A1Q8NGT9 310 aa15.72■□□□□ 0.11
SHANK1-201ENST00000293441 GINS3Q9BRX5 216 aa15.72■□□□□ 0.11
SHANK1-201ENST00000293441 S1PR5Q9H228 398 aa15.72■□□□□ 0.11
SHANK1-201ENST00000293441 TAS2R5Q9NYW4 299 aa15.72■□□□□ 0.11
SHANK1-201ENST00000293441 CAMKMTQ7Z624 323 aa15.72■□□□□ 0.11
SHANK1-201ENST00000293441 PRSS35Q8N3Z0 413 aa15.72■□□□□ 0.11
SHANK1-201ENST00000293441 GPR119Q8TDV5 335 aa15.72■□□□□ 0.11
SHANK1-201ENST00000293441 PHYHIPQ92561 330 aa15.72■□□□□ 0.11
SHANK1-201ENST00000293441 RNF32Q9H0A6 362 aa15.72■□□□□ 0.11
SHANK1-201ENST00000293441 CLEC1BQ9P126 229 aa15.72■□□□□ 0.11
SHANK1-201ENST00000293441 TCRBP04435 133 aa15.72■□□□□ 0.11
SHANK1-201ENST00000293441 HLA-DOBP13765 273 aa15.72■□□□□ 0.11
SHANK1-201ENST00000293441 ZNF626Q68DY1 528 aa15.72■□□□□ 0.11
SHANK1-201ENST00000293441 SLC7A5P1Q8MH63 180 aa15.72■□□□□ 0.11
SHANK1-201ENST00000293441 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.72■□□□□ 0.11
SHANK1-201ENST00000293441 TMEM43Q9BTV4 400 aa15.72■□□□□ 0.11
SHANK1-201ENST00000293441 ATP1B1P05026 303 aa15.71■□□□□ 0.11
SHANK1-201ENST00000293441 ZCCHC4Q9H5U6 513 aa15.71■□□□□ 0.11
SHANK1-201ENST00000293441 CMC2Q9NRP2 79 aa15.71■□□□□ 0.11
SHANK1-201ENST00000293441 SLC25A37Q9NYZ2 338 aa15.71■□□□□ 0.11
SHANK1-201ENST00000293441 CHST2Q9Y4C5 530 aa15.71■□□□□ 0.11
SHANK1-201ENST00000293441 AGAP14A8MT82 685 aa15.71■□□□□ 0.11
SHANK1-201ENST00000293441 NUPL2O15504 423 aaKnown RBP15.71■□□□□ 0.11
SHANK1-201ENST00000293441 SNAPINO95295 136 aa15.71■□□□□ 0.11
SHANK1-201ENST00000293441 LIPAP38571 399 aa15.71■□□□□ 0.11
SHANK1-201ENST00000293441 INSM1Q01101 510 aaPredicted RBP15.71■□□□□ 0.11
SHANK1-201ENST00000293441 HINT3Q9NQE9 182 aaKnown RBP15.71■□□□□ 0.11
SHANK1-201ENST00000293441 QPCTLQ9NXS2 382 aa15.71■□□□□ 0.11
SHANK1-201ENST00000293441 MEIKINA0A087WXM9 373 aa15.71■□□□□ 0.11
SHANK1-201ENST00000293441 FOXF1Q12946 379 aa15.71■□□□□ 0.11
SHANK1-201ENST00000293441 FAM199XQ6PEV8 388 aaPredicted RBP15.71■□□□□ 0.11
SHANK1-201ENST00000293441 PLXDC2Q6UX71 529 aa15.71■□□□□ 0.11
SHANK1-201ENST00000293441 PLK3Q9H4B4 646 aa15.71■□□□□ 0.11
SHANK1-201ENST00000293441 MOB1AQ9H8S9 216 aa15.71■□□□□ 0.11
SHANK1-201ENST00000293441 TUBG2Q9NRH3 451 aa15.71■□□□□ 0.11
SHANK1-201ENST00000293441 DOCK1Q14185 1865 aa15.71■□□□□ 0.11
SHANK1-201ENST00000293441 PRSS37A4D1T9 235 aa15.71■□□□□ 0.11
SHANK1-201ENST00000293441 KCNJ8Q15842 424 aa15.71■□□□□ 0.11
SHANK1-201ENST00000293441 KLHDC8BQ8IXV7 354 aa15.71■□□□□ 0.11
SHANK1-201ENST00000293441 RDH5Q92781 318 aa15.71■□□□□ 0.11
SHANK1-201ENST00000293441 YIF1AO95070 293 aa15.71■□□□□ 0.1
SHANK1-201ENST00000293441 B4GALT1P15291 398 aa15.71■□□□□ 0.1
SHANK1-201ENST00000293441 ELK1P19419 428 aa15.71■□□□□ 0.1
SHANK1-201ENST00000293441 OR1C1Q15619 314 aa15.71■□□□□ 0.1
SHANK1-201ENST00000293441 TECTBQ96PL2 329 aa15.71■□□□□ 0.1
SHANK1-201ENST00000293441 OPA3Q9H6K4 179 aa15.71■□□□□ 0.1
SHANK1-201ENST00000293441 SCN9AQ15858 1988 aa15.71■□□□□ 0.1
SHANK1-201ENST00000293441 OR6C65A6NJZ3 312 aa15.7■□□□□ 0.1
SHANK1-201ENST00000293441 CBR3O75828 277 aa15.7■□□□□ 0.1
SHANK1-201ENST00000293441 RPS27P42677 84 aaKnown RBP15.7■□□□□ 0.1
SHANK1-201ENST00000293441 FABP6P51161 128 aa15.7■□□□□ 0.1
SHANK1-201ENST00000293441 LGI3Q8N145 548 aa15.7■□□□□ 0.1
SHANK1-201ENST00000293441 KISS1RQ969F8 398 aaPredicted RBP15.7■□□□□ 0.1
SHANK1-201ENST00000293441 PURGQ9UJV8 347 aaKnown RBP15.7■□□□□ 0.1
SHANK1-201ENST00000293441 LILRA5A6NI73 299 aa15.7■□□□□ 0.1
SHANK1-201ENST00000293441 ABCD4O14678 606 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms