RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 RCC2Q9P258 522 aaKnown RBP12.42□□□□□ -0.42
SCARB2-227ENST00000640957 EML5Q05BV3 1969 aa12.41□□□□□ -0.42
SCARB2-227ENST00000640957 NME2P1O60361 137 aa12.41□□□□□ -0.42
SCARB2-227ENST00000640957 C1QL1O75973 258 aa12.41□□□□□ -0.42
SCARB2-227ENST00000640957 EFEMP2O95967 443 aa12.41□□□□□ -0.42
SCARB2-227ENST00000640957 GNRH1P01148 92 aa12.41□□□□□ -0.42
SCARB2-227ENST00000640957 SFTPBP07988 381 aa12.41□□□□□ -0.42
SCARB2-227ENST00000640957 HOXB5P09067 269 aa12.41□□□□□ -0.42
SCARB2-227ENST00000640957 TPT1P13693 172 aaKnown RBP12.41□□□□□ -0.42
SCARB2-227ENST00000640957 HRH1P35367 487 aa12.41□□□□□ -0.42
SCARB2-227ENST00000640957 NPY4RP50391 375 aa12.41□□□□□ -0.42
SCARB2-227ENST00000640957 ECH1Q13011 328 aa12.41□□□□□ -0.42
SCARB2-227ENST00000640957 ARHGAP11BQ3KRB8 267 aa12.41□□□□□ -0.42
SCARB2-227ENST00000640957 WDR38Q5JTN6 314 aa12.41□□□□□ -0.42
SCARB2-227ENST00000640957 TANGO2Q6ICL3 276 aa12.41□□□□□ -0.42
SCARB2-227ENST00000640957 OR13C9Q8NGT0 318 aa12.41□□□□□ -0.42
SCARB2-227ENST00000640957 RNF141Q8WVD5 230 aa12.41□□□□□ -0.42
SCARB2-227ENST00000640957 EPHA6Q9UF33 1036 aa12.41□□□□□ -0.42
SCARB2-227ENST00000640957 MRPS18BQ9Y676 258 aaKnown RBP12.41□□□□□ -0.42
SCARB2-227ENST00000640957 EIF1AYO14602 144 aaKnown RBP12.41□□□□□ -0.42
SCARB2-227ENST00000640957 P2RX6O15547 441 aa12.41□□□□□ -0.42
SCARB2-227ENST00000640957 DBIP07108 87 aaKnown RBP12.41□□□□□ -0.42
SCARB2-227ENST00000640957 OR8U8P0C7N1 319 aa12.41□□□□□ -0.42
SCARB2-227ENST00000640957 MST1LQ2TV78 715 aa12.41□□□□□ -0.42
SCARB2-227ENST00000640957 OR2L3Q8NG85 312 aa12.41□□□□□ -0.42
SCARB2-227ENST00000640957 TSACCQ96A04 125 aaPredicted RBP12.41□□□□□ -0.42
SCARB2-227ENST00000640957 S100PBPQ96BU1 408 aa12.41□□□□□ -0.42
SCARB2-227ENST00000640957 UTP23Q9BRU9 249 aaKnown RBP12.41□□□□□ -0.42
SCARB2-227ENST00000640957 OR51M1Q9H341 326 aa12.41□□□□□ -0.42
SCARB2-227ENST00000640957 B9D1Q9UPM9 204 aa12.41□□□□□ -0.42
SCARB2-227ENST00000640957 A0A1W2PQU0 124 aa12.4□□□□□ -0.42
SCARB2-227ENST00000640957 ZNF749O43361 778 aa12.4□□□□□ -0.42
SCARB2-227ENST00000640957 GPRIN2O60269 458 aa12.4□□□□□ -0.42
SCARB2-227ENST00000640957 KAT7O95251 611 aa12.4□□□□□ -0.42
SCARB2-227ENST00000640957 PNPP00491 289 aa12.4□□□□□ -0.42
SCARB2-227ENST00000640957 IGHV2-70P01814 119 aa12.4□□□□□ -0.42
SCARB2-227ENST00000640957 FOSL1P15407 271 aa12.4□□□□□ -0.42
SCARB2-227ENST00000640957 GDI1P31150 447 aa12.4□□□□□ -0.42
SCARB2-227ENST00000640957 CD96P40200 585 aa12.4□□□□□ -0.42
SCARB2-227ENST00000640957 ACTR1BP42025 376 aa12.4□□□□□ -0.42
SCARB2-227ENST00000640957 ACTR1AP61163 376 aa12.4□□□□□ -0.42
SCARB2-227ENST00000640957 DCDP81605 110 aaKnown RBP12.4□□□□□ -0.42
SCARB2-227ENST00000640957 ZNF616Q08AN1 781 aa12.4□□□□□ -0.42
SCARB2-227ENST00000640957 PDGFRLQ15198 375 aa12.4□□□□□ -0.42
SCARB2-227ENST00000640957 POMGNT2Q8NAT1 580 aa12.4□□□□□ -0.42
SCARB2-227ENST00000640957 TOX2Q96NM4 488 aa12.4□□□□□ -0.42
SCARB2-227ENST00000640957 C19orf43Q9BQ61 176 aa12.4□□□□□ -0.42
SCARB2-227ENST00000640957 RPP25Q9BUL9 199 aaKnown RBP12.4□□□□□ -0.42
SCARB2-227ENST00000640957 SUCNR1Q9BXA5 334 aa12.4□□□□□ -0.42
SCARB2-227ENST00000640957 ELOVL3Q9HB03 270 aa12.4□□□□□ -0.42
SCARB2-227ENST00000640957 ZNF275Q9NSD4 429 aaPredicted RBP12.4□□□□□ -0.42
SCARB2-227ENST00000640957 A0A0B4J2E0 115 aa12.4□□□□□ -0.42
SCARB2-227ENST00000640957 A0A1B0GX12 115 aa12.4□□□□□ -0.42
SCARB2-227ENST00000640957 H0Y8X5 98 aa12.4□□□□□ -0.42
SCARB2-227ENST00000640957 VEGFDO43915 354 aa12.4□□□□□ -0.42
SCARB2-227ENST00000640957 CD63P08962 238 aa12.4□□□□□ -0.42
SCARB2-227ENST00000640957 SMIM6P0DI80 62 aa12.4□□□□□ -0.42
SCARB2-227ENST00000640957 GNB3P16520 340 aa12.4□□□□□ -0.42
SCARB2-227ENST00000640957 GPX4P36969 197 aaPredicted RBP12.4□□□□□ -0.42
SCARB2-227ENST00000640957 RAB28P51157 221 aa12.4□□□□□ -0.42
SCARB2-227ENST00000640957 TAS2R19P59542 299 aa12.4□□□□□ -0.42
SCARB2-227ENST00000640957 MRPS10P82664 201 aaKnown RBP12.4□□□□□ -0.42
SCARB2-227ENST00000640957 PJVKQ0ZLH3 352 aa12.4□□□□□ -0.42
SCARB2-227ENST00000640957 RNASE10Q5GAN6 216 aaKnown RBP12.4□□□□□ -0.42
SCARB2-227ENST00000640957 METRNLQ641Q3 311 aa12.4□□□□□ -0.42
SCARB2-227ENST00000640957 PARGQ86W56 976 aa12.4□□□□□ -0.42
SCARB2-227ENST00000640957 ZNF584Q8IVC4 421 aa12.4□□□□□ -0.42
SCARB2-227ENST00000640957 TMIEQ8NEW7 156 aa12.4□□□□□ -0.42
SCARB2-227ENST00000640957 INTS14Q96SY0 518 aa12.4□□□□□ -0.42
SCARB2-227ENST00000640957 COMMD4Q9H0A8 199 aa12.4□□□□□ -0.42
SCARB2-227ENST00000640957 DTX4Q9Y2E6 619 aa12.4□□□□□ -0.42
SCARB2-227ENST00000640957 MAP1BP46821 2468 aaKnown RBP12.4□□□□□ -0.42
SCARB2-227ENST00000640957 C9orf170A2RU37 121 aa12.4□□□□□ -0.43
SCARB2-227ENST00000640957 OR13C7P0DN81 318 aa12.4□□□□□ -0.43
SCARB2-227ENST00000640957 PSMB6P28072 239 aa12.4□□□□□ -0.43
SCARB2-227ENST00000640957 PEBP1P30086 187 aaKnown RBP12.4□□□□□ -0.43
SCARB2-227ENST00000640957 NDUFA6P56556 154 aa12.4□□□□□ -0.43
SCARB2-227ENST00000640957 AWAT1Q58HT5 328 aa12.4□□□□□ -0.43
SCARB2-227ENST00000640957 RNF113BQ8IZP6 322 aaKnown RBP12.4□□□□□ -0.43
SCARB2-227ENST00000640957 KDM8Q8N371 416 aa12.4□□□□□ -0.43
SCARB2-227ENST00000640957 EID2Q8N6I1 236 aa12.4□□□□□ -0.43
SCARB2-227ENST00000640957 ZNF383Q8NA42 475 aa12.4□□□□□ -0.43
SCARB2-227ENST00000640957 APCDD1LQ8NCL9 501 aa12.4□□□□□ -0.43
SCARB2-227ENST00000640957 INTS12Q96CB8 462 aaKnown RBP12.4□□□□□ -0.43
SCARB2-227ENST00000640957 SLC41A2Q96JW4 573 aa12.4□□□□□ -0.43
SCARB2-227ENST00000640957 HAO2Q9NYQ3 351 aa12.4□□□□□ -0.43
SCARB2-227ENST00000640957 TAS2R8Q9NYW2 309 aa12.4□□□□□ -0.43
SCARB2-227ENST00000640957 LRIT1Q9P2V4 623 aa12.4□□□□□ -0.43
SCARB2-227ENST00000640957 ICAM5Q9UMF0 924 aa12.4□□□□□ -0.43
SCARB2-227ENST00000640957 GPR37O15354 613 aa12.39□□□□□ -0.43
SCARB2-227ENST00000640957 YKT6O15498 198 aa12.39□□□□□ -0.43
SCARB2-227ENST00000640957 CDC40O60508 579 aaKnown RBP eCLIP12.39□□□□□ -0.43
SCARB2-227ENST00000640957 ZNF205O95201 554 aa12.39□□□□□ -0.43
SCARB2-227ENST00000640957 CISD3P0C7P0 127 aa12.39□□□□□ -0.43
SCARB2-227ENST00000640957 S100PP25815 95 aa12.39□□□□□ -0.43
SCARB2-227ENST00000640957 MNX1P50219 401 aaPredicted RBP12.39□□□□□ -0.43
SCARB2-227ENST00000640957 ASCL1P50553 236 aa12.39□□□□□ -0.43
SCARB2-227ENST00000640957 DEFA6Q01524 100 aa12.39□□□□□ -0.43
SCARB2-227ENST00000640957 ILF3Q12906 894 aaKnown RBP eCLIP12.39□□□□□ -0.43
SCARB2-227ENST00000640957 IRF4Q15306 451 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms