RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 OTUD6AQ7L8S5 288 aa2.32□□□□□ -2.04
SCAMP1-205ENST00000614488 NBPF5PQ86XG9 351 aaPredicted RBP2.32□□□□□ -2.04
SCAMP1-205ENST00000614488 MIR7-3HGQ8N6C7 128 aa2.32□□□□□ -2.04
SCAMP1-205ENST00000614488 CXorf40AQ8TE69 158 aa2.32□□□□□ -2.04
SCAMP1-205ENST00000614488 NTAN1Q96AB6 310 aa2.32□□□□□ -2.04
SCAMP1-205ENST00000614488 MRGPRFQ96AM1 343 aa2.32□□□□□ -2.04
SCAMP1-205ENST00000614488 GCOM2Q9BZD3 368 aaPredicted RBP2.32□□□□□ -2.04
SCAMP1-205ENST00000614488 CRLF2Q9HC73 371 aa2.32□□□□□ -2.04
SCAMP1-205ENST00000614488 DHX57Q6P158 1386 aaKnown RBP2.32□□□□□ -2.04
SCAMP1-205ENST00000614488 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.32□□□□□ -2.04
SCAMP1-205ENST00000614488 ANKRD12Q6UB98 2062 aa2.31□□□□□ -2.04
SCAMP1-205ENST00000614488 IGHV1OR15-9A0A0B4J2B8 117 aa2.31□□□□□ -2.04
SCAMP1-205ENST00000614488 LINC00854A0A1B0GVQ3 168 aa2.31□□□□□ -2.04
SCAMP1-205ENST00000614488 IGKV1D-16P01601 117 aa2.31□□□□□ -2.04
SCAMP1-205ENST00000614488 FGGP02679 453 aa2.31□□□□□ -2.04
SCAMP1-205ENST00000614488 ASGR1P07306 291 aa2.31□□□□□ -2.04
SCAMP1-205ENST00000614488 KITLGP21583 273 aa2.31□□□□□ -2.04
SCAMP1-205ENST00000614488 IFNA8P32881 189 aa2.31□□□□□ -2.04
SCAMP1-205ENST00000614488 DEKP35659 375 aaKnown RBP2.31□□□□□ -2.04
SCAMP1-205ENST00000614488 SSR4P51571 173 aa2.31□□□□□ -2.04
SCAMP1-205ENST00000614488 TWF1Q12792 350 aa2.31□□□□□ -2.04
SCAMP1-205ENST00000614488 ECH1Q13011 328 aa2.31□□□□□ -2.04
SCAMP1-205ENST00000614488 DDX39BQ13838 428 aaKnown RBP2.31□□□□□ -2.04
SCAMP1-205ENST00000614488 PLET1Q6UQ28 207 aa2.31□□□□□ -2.04
SCAMP1-205ENST00000614488 ZCCHC7Q8N3Z6 543 aaKnown RBP2.31□□□□□ -2.04
SCAMP1-205ENST00000614488 OR9A2Q8NGT5 310 aa2.31□□□□□ -2.04
SCAMP1-205ENST00000614488 GALNT14Q96FL9 552 aa2.31□□□□□ -2.04
SCAMP1-205ENST00000614488 GSDMAQ96QA5 445 aa2.31□□□□□ -2.04
SCAMP1-205ENST00000614488 CFAP45Q9UL16 551 aa2.31□□□□□ -2.04
SCAMP1-205ENST00000614488 CLEC4AQ9UMR7 237 aa2.31□□□□□ -2.04
SCAMP1-205ENST00000614488 TTC41PQ6P2S7 1318 aa2.31□□□□□ -2.04
SCAMP1-205ENST00000614488 WDR19Q8NEZ3 1342 aa2.31□□□□□ -2.04
SCAMP1-205ENST00000614488 MAPK8IP3Q9UPT6 1336 aa2.31□□□□□ -2.04
SCAMP1-205ENST00000614488 KANK1Q14678 1352 aa2.31□□□□□ -2.04
SCAMP1-205ENST00000614488 AHDC1Q5TGY3 1603 aaPredicted RBP2.31□□□□□ -2.04
SCAMP1-205ENST00000614488 SHANK1Q9Y566 2161 aa2.3□□□□□ -2.04
SCAMP1-205ENST00000614488 TRAV6A0A075B6T7 132 aa2.3□□□□□ -2.04
SCAMP1-205ENST00000614488 XKRY2A2RUG3 117 aa2.3□□□□□ -2.04
SCAMP1-205ENST00000614488 BTBD17A6NE02 478 aa2.3□□□□□ -2.04
SCAMP1-205ENST00000614488 LRRIQ4A6NIV6 560 aa2.3□□□□□ -2.04
SCAMP1-205ENST00000614488 MRPS12O15235 138 aaKnown RBP2.3□□□□□ -2.04
SCAMP1-205ENST00000614488 EEDO75530 441 aaKnown RBP2.3□□□□□ -2.04
SCAMP1-205ENST00000614488 SSTR5P35346 364 aa2.3□□□□□ -2.04
SCAMP1-205ENST00000614488 CRYBB2P43320 205 aa2.3□□□□□ -2.04
SCAMP1-205ENST00000614488 AIF1P55008 147 aa2.3□□□□□ -2.04
SCAMP1-205ENST00000614488 MRPS22P82650 360 aaKnown RBP2.3□□□□□ -2.04
SCAMP1-205ENST00000614488 MXD1Q05195 221 aa2.3□□□□□ -2.04
SCAMP1-205ENST00000614488 ZMYND11Q15326 602 aa2.3□□□□□ -2.04
SCAMP1-205ENST00000614488 C1orf185Q5T7R7 199 aa2.3□□□□□ -2.04
SCAMP1-205ENST00000614488 METTL21CQ5VZV1 264 aa2.3□□□□□ -2.04
SCAMP1-205ENST00000614488 ANGPTL8Q6UXH0 198 aa2.3□□□□□ -2.04
SCAMP1-205ENST00000614488 IQCF2Q8IXL9 164 aa2.3□□□□□ -2.04
SCAMP1-205ENST00000614488 LIX1Q8N485 282 aa2.3□□□□□ -2.04
SCAMP1-205ENST00000614488 EID2Q8N6I1 236 aa2.3□□□□□ -2.04
SCAMP1-205ENST00000614488 EIF1ADQ8N9N8 165 aaKnown RBP2.3□□□□□ -2.04
SCAMP1-205ENST00000614488 BHLHE23Q8NDY6 225 aa2.3□□□□□ -2.04
SCAMP1-205ENST00000614488 SDR9C7Q8NEX9 313 aa2.3□□□□□ -2.04
SCAMP1-205ENST00000614488 CCDC148Q8NFR7 591 aa2.3□□□□□ -2.04
SCAMP1-205ENST00000614488 OR13C2Q8NGS9 318 aa2.3□□□□□ -2.04
SCAMP1-205ENST00000614488 PIFOQ8TCI5 191 aa2.3□□□□□ -2.04
SCAMP1-205ENST00000614488 SERPINB12Q96P63 405 aa2.3□□□□□ -2.04
SCAMP1-205ENST00000614488 TEKT3Q9BXF9 490 aa2.3□□□□□ -2.04
SCAMP1-205ENST00000614488 GON7Q9BXV9 100 aa2.3□□□□□ -2.04
SCAMP1-205ENST00000614488 CWH43Q9H720 699 aa2.3□□□□□ -2.04
SCAMP1-205ENST00000614488 IKZF2Q9UKS7 526 aa2.3□□□□□ -2.04
SCAMP1-205ENST00000614488 ING4Q9UNL4 249 aa2.3□□□□□ -2.04
SCAMP1-205ENST00000614488 FAM47DPA6NHR8 397 aa2.29□□□□□ -2.04
SCAMP1-205ENST00000614488 DPM1O60762 260 aa2.29□□□□□ -2.04
SCAMP1-205ENST00000614488 WARSP23381 471 aaKnown RBP2.29□□□□□ -2.04
SCAMP1-205ENST00000614488 F2RP25116 425 aa2.29□□□□□ -2.04
SCAMP1-205ENST00000614488 YWHAGP61981 247 aaKnown RBP eCLIP2.29□□□□□ -2.04
SCAMP1-205ENST00000614488 ACTG2P63267 376 aa2.29□□□□□ -2.04
SCAMP1-205ENST00000614488 CTSL3PQ5NE16 218 aa2.29□□□□□ -2.04
SCAMP1-205ENST00000614488 TAS2R42Q7RTR8 314 aa2.29□□□□□ -2.04
SCAMP1-205ENST00000614488 SLC22A9Q8IVM8 553 aa2.29□□□□□ -2.04
SCAMP1-205ENST00000614488 ZNF547Q8IVP9 402 aa2.29□□□□□ -2.04
SCAMP1-205ENST00000614488 CDKL3Q8IVW4 592 aaPredicted RBP2.29□□□□□ -2.04
SCAMP1-205ENST00000614488 PDCL2Q8N4E4 241 aa2.29□□□□□ -2.04
SCAMP1-205ENST00000614488 LRRC52Q8N7C0 313 aa2.29□□□□□ -2.04
SCAMP1-205ENST00000614488 AKR7LQ8NHP1 331 aa2.29□□□□□ -2.04
SCAMP1-205ENST00000614488 CIRBP-AS1Q8TBR5 109 aa2.29□□□□□ -2.04
SCAMP1-205ENST00000614488 FBXO32Q969P5 355 aa2.29□□□□□ -2.04
SCAMP1-205ENST00000614488 SLC25A46Q96AG3 418 aa2.29□□□□□ -2.04
SCAMP1-205ENST00000614488 TIMM17AQ99595 171 aa2.29□□□□□ -2.04
SCAMP1-205ENST00000614488 CCDC77Q9BR77 488 aa2.29□□□□□ -2.04
SCAMP1-205ENST00000614488 C1orf198Q9H425 327 aa2.29□□□□□ -2.04
SCAMP1-205ENST00000614488 LRRC40Q9H9A6 602 aa2.29□□□□□ -2.04
SCAMP1-205ENST00000614488 KCNJ16Q9NPI9 418 aa2.29□□□□□ -2.04
SCAMP1-205ENST00000614488 HYOU1Q9Y4L1 999 aa2.29□□□□□ -2.04
SCAMP1-205ENST00000614488 KCNE3Q9Y6H6 103 aa2.29□□□□□ -2.04
SCAMP1-205ENST00000614488 CNTNAP1P78357 1384 aa2.28□□□□□ -2.04
SCAMP1-205ENST00000614488 PIK3R4Q99570 1358 aa2.28□□□□□ -2.04
SCAMP1-205ENST00000614488 ZNF816-ZNF321PA0A0X1KG74 233 aa2.28□□□□□ -2.04
SCAMP1-205ENST00000614488 NCF1BA6NI72 391 aaPredicted RBP2.28□□□□□ -2.04
SCAMP1-205ENST00000614488 NCF1CA8MVU1 366 aaPredicted RBP2.28□□□□□ -2.04
SCAMP1-205ENST00000614488 LGALS9O00182 355 aa2.28□□□□□ -2.04
SCAMP1-205ENST00000614488 CDC7O00311 574 aa2.28□□□□□ -2.04
SCAMP1-205ENST00000614488 SURF6O75683 361 aaKnown RBP2.28□□□□□ -2.04
SCAMP1-205ENST00000614488 IL1BP01584 269 aa2.28□□□□□ -2.04
SCAMP1-205ENST00000614488 ZNF806P0C7X5 589 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms