RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 AQP7O14520 342 aa15.76■□□□□ 0.11
SHANK1-201ENST00000293441 PCSK6P29122 969 aa15.76■□□□□ 0.11
SHANK1-201ENST00000293441 ETV6P41212 452 aa15.76■□□□□ 0.11
SHANK1-201ENST00000293441 FCRL6Q6DN72 434 aa15.76■□□□□ 0.11
SHANK1-201ENST00000293441 TCTN3Q6NUS6 607 aa15.76■□□□□ 0.11
SHANK1-201ENST00000293441 H2BFWTQ7Z2G1 175 aa15.76■□□□□ 0.11
SHANK1-201ENST00000293441 OR51H1Q8NH63 302 aa15.76■□□□□ 0.11
SHANK1-201ENST00000293441 ACER3Q9NUN7 267 aa15.76■□□□□ 0.11
SHANK1-201ENST00000293441 A0A0D9SG52 128 aa15.75■□□□□ 0.11
SHANK1-201ENST00000293441 ETV1P50549 477 aa15.75■□□□□ 0.11
SHANK1-201ENST00000293441 LIPNQ5VXI9 398 aa15.75■□□□□ 0.11
SHANK1-201ENST00000293441 RFPL4BQ6ZWI9 263 aa15.75■□□□□ 0.11
SHANK1-201ENST00000293441 NRARPQ7Z6K4 114 aa15.75■□□□□ 0.11
SHANK1-201ENST00000293441 TMEM99Q8N816 258 aa15.75■□□□□ 0.11
SHANK1-201ENST00000293441 ARPC5LQ9BPX5 153 aa15.75■□□□□ 0.11
SHANK1-201ENST00000293441 TINAGL1Q9GZM7 467 aaPredicted RBP15.75■□□□□ 0.11
SHANK1-201ENST00000293441 FBXO4Q9UKT5 387 aa15.75■□□□□ 0.11
SHANK1-201ENST00000293441 PPP1R3CQ9UQK1 317 aa15.75■□□□□ 0.11
SHANK1-201ENST00000293441 CCDC187A0A096LP49 1063 aa15.75■□□□□ 0.11
SHANK1-201ENST00000293441 CLN3Q13286 438 aa15.75■□□□□ 0.11
SHANK1-201ENST00000293441 SOWAHCQ53LP3 525 aaPredicted RBP15.75■□□□□ 0.11
SHANK1-201ENST00000293441 WDR88Q6ZMY6 472 aa15.75■□□□□ 0.11
SHANK1-201ENST00000293441 MDGA2Q7Z553 956 aa15.75■□□□□ 0.11
SHANK1-201ENST00000293441 CLDN22Q8N7P3 220 aa15.75■□□□□ 0.11
SHANK1-201ENST00000293441 OR1S2Q8NGQ3 325 aa15.75■□□□□ 0.11
SHANK1-201ENST00000293441 MED29Q9NX70 200 aa15.75■□□□□ 0.11
SHANK1-201ENST00000293441 NME2P22392 152 aa15.75■□□□□ 0.11
SHANK1-201ENST00000293441 APEX1P27695 318 aaKnown RBP15.75■□□□□ 0.11
SHANK1-201ENST00000293441 RNF4P78317 190 aa15.75■□□□□ 0.11
SHANK1-201ENST00000293441 SAMD10Q9BYL1 202 aa15.75■□□□□ 0.11
SHANK1-201ENST00000293441 RIMS4Q9H426 269 aaPredicted RBP15.75■□□□□ 0.11
SHANK1-201ENST00000293441 POMT2Q9UKY4 750 aa15.75■□□□□ 0.11
SHANK1-201ENST00000293441 HMX2A2RU54 273 aa15.75■□□□□ 0.11
SHANK1-201ENST00000293441 LMO7DNF2Z398 122 aa15.75■□□□□ 0.11
SHANK1-201ENST00000293441 METAP1P53582 386 aa15.75■□□□□ 0.11
SHANK1-201ENST00000293441 SPTY2D1-AS1A0A0U1RR47 76 aa15.75■□□□□ 0.11
SHANK1-201ENST00000293441 M0R135 149 aa15.75■□□□□ 0.11
SHANK1-201ENST00000293441 FCMRO60667 390 aa15.75■□□□□ 0.11
SHANK1-201ENST00000293441 GLAP06280 429 aa15.75■□□□□ 0.11
SHANK1-201ENST00000293441 RPL35P42766 123 aaKnown RBP15.75■□□□□ 0.11
SHANK1-201ENST00000293441 TLE4Q04727 773 aa15.75■□□□□ 0.11
SHANK1-201ENST00000293441 BATFQ16520 125 aa15.75■□□□□ 0.11
SHANK1-201ENST00000293441 SYT14P1Q58G82 188 aa15.75■□□□□ 0.11
SHANK1-201ENST00000293441 SPNS2Q8IVW8 549 aa15.75■□□□□ 0.11
SHANK1-201ENST00000293441 ZNF799Q96GE5 643 aa15.75■□□□□ 0.11
SHANK1-201ENST00000293441 PLEKHF2Q9H8W4 249 aa15.75■□□□□ 0.11
SHANK1-201ENST00000293441 SLC17A4Q9Y2C5 497 aa15.75■□□□□ 0.11
SHANK1-201ENST00000293441 EMC4Q5J8M3 183 aa15.74■□□□□ 0.11
SHANK1-201ENST00000293441 OTPQ5XKR4 325 aa15.74■□□□□ 0.11
SHANK1-201ENST00000293441 OR8G2PQ6IF36 304 aa15.74■□□□□ 0.11
SHANK1-201ENST00000293441 CCDC71Q8IV32 467 aaPredicted RBP15.74■□□□□ 0.11
SHANK1-201ENST00000293441 SMAP2Q8WU79 429 aaPredicted RBP15.74■□□□□ 0.11
SHANK1-201ENST00000293441 ST8SIA1Q92185 356 aa15.74■□□□□ 0.11
SHANK1-201ENST00000293441 BSCL2Q96G97 398 aaPredicted RBP15.74■□□□□ 0.11
SHANK1-201ENST00000293441 WBP1LQ9NX94 342 aa15.74■□□□□ 0.11
SHANK1-201ENST00000293441 TRDV1A0A1B0GX56 115 aa15.74■□□□□ 0.11
SHANK1-201ENST00000293441 FRG2CA6NGY1 282 aa15.74■□□□□ 0.11
SHANK1-201ENST00000293441 SPI1P17947 270 aa15.74■□□□□ 0.11
SHANK1-201ENST00000293441 GUSBP11Q6P575 273 aa15.74■□□□□ 0.11
SHANK1-201ENST00000293441 SCAF4O95104 1147 aaKnown RBP15.74■□□□□ 0.11
SHANK1-201ENST00000293441 SBK2P0C263 348 aa15.74■□□□□ 0.11
SHANK1-201ENST00000293441 FOLR1P15328 257 aa15.74■□□□□ 0.11
SHANK1-201ENST00000293441 C20orf85Q9H1P6 137 aa15.74■□□□□ 0.11
SHANK1-201ENST00000293441 FAM212BQ9NTI7 297 aaPredicted RBP15.74■□□□□ 0.11
SHANK1-201ENST00000293441 EXO1Q9UQ84 846 aaKnown RBP15.74■□□□□ 0.11
SHANK1-201ENST00000293441 YBX2Q9Y2T7 364 aaKnown RBP15.74■□□□□ 0.11
SHANK1-201ENST00000293441 UPK1AO00322 258 aa15.74■□□□□ 0.11
SHANK1-201ENST00000293441 PSD2Q9BQI7 771 aa15.74■□□□□ 0.11
SHANK1-201ENST00000293441 KIAA1456Q9P272 454 aa15.74■□□□□ 0.11
SHANK1-201ENST00000293441 IMPA2O14732 288 aa15.74■□□□□ 0.11
SHANK1-201ENST00000293441 GABRA4P48169 554 aa15.74■□□□□ 0.11
SHANK1-201ENST00000293441 ALKAL2Q6UX46 152 aa15.74■□□□□ 0.11
SHANK1-201ENST00000293441 DEFB124Q8NES8 71 aa15.74■□□□□ 0.11
SHANK1-201ENST00000293441 POLDIP2Q9Y2S7 368 aa15.74■□□□□ 0.11
SHANK1-201ENST00000293441 ECI1P42126 302 aa15.73■□□□□ 0.11
SHANK1-201ENST00000293441 TMEM81Q6P7N7 255 aa15.73■□□□□ 0.11
SHANK1-201ENST00000293441 LHFPL2Q6ZUX7 228 aa15.73■□□□□ 0.11
SHANK1-201ENST00000293441 SSX9Q7RTT3 188 aa15.73■□□□□ 0.11
SHANK1-201ENST00000293441 OR1M1Q8NGA1 313 aa15.73■□□□□ 0.11
SHANK1-201ENST00000293441 OLIG1Q8TAK6 271 aa15.73■□□□□ 0.11
SHANK1-201ENST00000293441 A0A087WV62 115 aa15.73■□□□□ 0.11
SHANK1-201ENST00000293441 FITM1A5D6W6 292 aa15.73■□□□□ 0.11
SHANK1-201ENST00000293441 LGALS8O00214 317 aa15.73■□□□□ 0.11
SHANK1-201ENST00000293441 PIAS2O75928 621 aa15.73■□□□□ 0.11
SHANK1-201ENST00000293441 PPP3CBP16298 524 aa15.73■□□□□ 0.11
SHANK1-201ENST00000293441 RELAQ04206 551 aa15.73■□□□□ 0.11
SHANK1-201ENST00000293441 FAM53BQ14153 422 aa15.73■□□□□ 0.11
SHANK1-201ENST00000293441 CYHR1Q6ZMK1 362 aa15.73■□□□□ 0.11
SHANK1-201ENST00000293441 ARIH2OSQ8N7S6 290 aa15.73■□□□□ 0.11
SHANK1-201ENST00000293441 PLPP5Q8NEB5 264 aa15.73■□□□□ 0.11
SHANK1-201ENST00000293441 R4GN57 208 aa15.73■□□□□ 0.11
SHANK1-201ENST00000293441 ETHE1O95571 254 aa15.73■□□□□ 0.11
SHANK1-201ENST00000293441 TGM6O95932 706 aa15.73■□□□□ 0.11
SHANK1-201ENST00000293441 MGST1P10620 155 aaKnown RBP15.73■□□□□ 0.11
SHANK1-201ENST00000293441 TESK1Q15569 626 aa15.73■□□□□ 0.11
SHANK1-201ENST00000293441 IAH1Q2TAA2 248 aaPredicted RBP15.73■□□□□ 0.11
SHANK1-201ENST00000293441 DHRS13Q6UX07 377 aa15.73■□□□□ 0.11
SHANK1-201ENST00000293441 LACC1Q8IV20 430 aa15.73■□□□□ 0.11
SHANK1-201ENST00000293441 OR52N5Q8NH56 324 aa15.73■□□□□ 0.11
SHANK1-201ENST00000293441 FCRL1Q96LA6 429 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms