RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 ASB3Q9Y575 518 aa2.36□□□□□ -2.03
SCAMP1-205ENST00000614488 CASQ2O14958 399 aaPredicted RBP2.35□□□□□ -2.03
SCAMP1-205ENST00000614488 PSTPIP1O43586 416 aa2.35□□□□□ -2.03
SCAMP1-205ENST00000614488 SPAG6O75602 509 aa2.35□□□□□ -2.03
SCAMP1-205ENST00000614488 TMEM50AO95807 157 aa2.35□□□□□ -2.03
SCAMP1-205ENST00000614488 ATP1B2P14415 290 aaPredicted RBP2.35□□□□□ -2.03
SCAMP1-205ENST00000614488 RAB3BP20337 219 aa2.35□□□□□ -2.03
SCAMP1-205ENST00000614488 TAGLN2P37802 199 aaKnown RBP2.35□□□□□ -2.03
SCAMP1-205ENST00000614488 CXCL12P48061 93 aa2.35□□□□□ -2.03
SCAMP1-205ENST00000614488 CHIT1Q13231 466 aa2.35□□□□□ -2.03
SCAMP1-205ENST00000614488 TMED1Q13445 227 aa2.35□□□□□ -2.03
SCAMP1-205ENST00000614488 PIGHQ14442 188 aaPredicted RBP2.35□□□□□ -2.03
SCAMP1-205ENST00000614488 RGNQ15493 299 aa2.35□□□□□ -2.03
SCAMP1-205ENST00000614488 IMMTQ16891 758 aaKnown RBP2.35□□□□□ -2.03
SCAMP1-205ENST00000614488 ZYG11AQ6WRX3 759 aa2.35□□□□□ -2.03
SCAMP1-205ENST00000614488 HSD17B11Q8NBQ5 300 aa2.35□□□□□ -2.03
SCAMP1-205ENST00000614488 OR4F6Q8NGB9 312 aa2.35□□□□□ -2.03
SCAMP1-205ENST00000614488 OR8U1Q8NH10 309 aa2.35□□□□□ -2.03
SCAMP1-205ENST00000614488 LINC01560Q8TB33 94 aa2.35□□□□□ -2.03
SCAMP1-205ENST00000614488 PIBF1Q8WXW3 757 aa2.35□□□□□ -2.03
SCAMP1-205ENST00000614488 C12orf42Q96LP6 360 aa2.35□□□□□ -2.03
SCAMP1-205ENST00000614488 SGK2Q9HBY8 427 aa2.35□□□□□ -2.03
SCAMP1-205ENST00000614488 DDX18Q9NVP1 670 aaKnown RBP2.35□□□□□ -2.03
SCAMP1-205ENST00000614488 NMRK1Q9NWW6 199 aa2.35□□□□□ -2.03
SCAMP1-205ENST00000614488 ZNF639Q9UID6 485 aa2.35□□□□□ -2.03
SCAMP1-205ENST00000614488 SIGLEC9Q9Y336 463 aa2.35□□□□□ -2.03
SCAMP1-205ENST00000614488 TMED5Q9Y3A6 229 aa2.35□□□□□ -2.03
SCAMP1-205ENST00000614488 NPTNQ9Y639 398 aa2.35□□□□□ -2.03
SCAMP1-205ENST00000614488 SHROOM3Q8TF72 1996 aa2.35□□□□□ -2.03
SCAMP1-205ENST00000614488 CTAGE15A4D2H0 777 aa2.34□□□□□ -2.03
SCAMP1-205ENST00000614488 FAM25EA8MYX2 175 aa2.34□□□□□ -2.03
SCAMP1-205ENST00000614488 F6UB75 175 aa2.34□□□□□ -2.03
SCAMP1-205ENST00000614488 HLA-DQA1P01909 254 aa2.34□□□□□ -2.03
SCAMP1-205ENST00000614488 CD74P04233 296 aa2.34□□□□□ -2.03
SCAMP1-205ENST00000614488 DTYMKP23919 212 aa2.34□□□□□ -2.03
SCAMP1-205ENST00000614488 PRRX1P54821 245 aa2.34□□□□□ -2.03
SCAMP1-205ENST00000614488 GPX6P59796 221 aa2.34□□□□□ -2.03
SCAMP1-205ENST00000614488 SEC61GP60059 68 aa2.34□□□□□ -2.03
SCAMP1-205ENST00000614488 ZSCAN26Q16670 478 aa2.34□□□□□ -2.03
SCAMP1-205ENST00000614488 UNQ9165/PRO28630Q6UXU0 137 aa2.34□□□□□ -2.03
SCAMP1-205ENST00000614488 CTAGE6Q86UF2 777 aa2.34□□□□□ -2.03
SCAMP1-205ENST00000614488 LRP11Q86VZ4 500 aa2.34□□□□□ -2.03
SCAMP1-205ENST00000614488 EGFL6Q8IUX8 553 aa2.34□□□□□ -2.03
SCAMP1-205ENST00000614488 OR56B2PQ8NGI1 322 aa2.34□□□□□ -2.03
SCAMP1-205ENST00000614488 OR10J6PQ8NGY7 276 aa2.34□□□□□ -2.03
SCAMP1-205ENST00000614488 C17orf50Q8WW18 174 aa2.34□□□□□ -2.03
SCAMP1-205ENST00000614488 TIMM29Q9BSF4 260 aa2.34□□□□□ -2.03
SCAMP1-205ENST00000614488 GORASP2Q9H8Y8 452 aa2.34□□□□□ -2.03
SCAMP1-205ENST00000614488 FN3KRPQ9HA64 309 aa2.34□□□□□ -2.03
SCAMP1-205ENST00000614488 ETNK2Q9NVF9 386 aa2.34□□□□□ -2.03
SCAMP1-205ENST00000614488 COX16Q9P0S2 106 aa2.34□□□□□ -2.03
SCAMP1-205ENST00000614488 NSD2O96028 1365 aa2.34□□□□□ -2.04
SCAMP1-205ENST00000614488 IGKV3D-11A0A0A0MRZ8 115 aa2.33□□□□□ -2.04
SCAMP1-205ENST00000614488 ARPC4-TTLL3A0A0A6YYG9 625 aa2.33□□□□□ -2.04
SCAMP1-205ENST00000614488 MTX2O75431 263 aa2.33□□□□□ -2.04
SCAMP1-205ENST00000614488 ETS2P15036 469 aa2.33□□□□□ -2.04
SCAMP1-205ENST00000614488 GLRA2P23416 452 aa2.33□□□□□ -2.04
SCAMP1-205ENST00000614488 UBE2HP62256 183 aa2.33□□□□□ -2.04
SCAMP1-205ENST00000614488 DMTNQ08495 405 aa2.33□□□□□ -2.04
SCAMP1-205ENST00000614488 ZNF616Q08AN1 781 aa2.33□□□□□ -2.04
SCAMP1-205ENST00000614488 IL24Q13007 206 aa2.33□□□□□ -2.04
SCAMP1-205ENST00000614488 SLC39A6Q13433 755 aa2.33□□□□□ -2.04
SCAMP1-205ENST00000614488 HSP90AB3PQ58FF7 597 aa2.33□□□□□ -2.04
SCAMP1-205ENST00000614488 CAVIN4Q5BKX8 364 aa2.33□□□□□ -2.04
SCAMP1-205ENST00000614488 C6orf226Q5I0X4 101 aa2.33□□□□□ -2.04
SCAMP1-205ENST00000614488 CCNJQ5T5M9 372 aa2.33□□□□□ -2.04
SCAMP1-205ENST00000614488 PMF1Q6P1K2 205 aa2.33□□□□□ -2.04
SCAMP1-205ENST00000614488 FBXW12Q6X9E4 464 aa2.33□□□□□ -2.04
SCAMP1-205ENST00000614488 BRD3OSQ6XYD6 125 aa2.33□□□□□ -2.04
SCAMP1-205ENST00000614488 PDIK1LQ8N165 341 aa2.33□□□□□ -2.04
SCAMP1-205ENST00000614488 OR4K5Q8NGD3 323 aa2.33□□□□□ -2.04
SCAMP1-205ENST00000614488 OR1L6Q8NGR2 347 aa2.33□□□□□ -2.04
SCAMP1-205ENST00000614488 LILRB4Q8NHJ6 448 aa2.33□□□□□ -2.04
SCAMP1-205ENST00000614488 RHEBL1Q8TAI7 183 aa2.33□□□□□ -2.04
SCAMP1-205ENST00000614488 AGR3Q8TD06 166 aa2.33□□□□□ -2.04
SCAMP1-205ENST00000614488 FLYWCH2Q96CP2 140 aaKnown RBP2.33□□□□□ -2.04
SCAMP1-205ENST00000614488 NPY6RQ99463 290 aa2.33□□□□□ -2.04
SCAMP1-205ENST00000614488 VCX2Q9H322 139 aa2.33□□□□□ -2.04
SCAMP1-205ENST00000614488 NCOR1P1Q9H4R4 102 aa2.33□□□□□ -2.04
SCAMP1-205ENST00000614488 CAB39Q9Y376 341 aaPredicted RBP2.33□□□□□ -2.04
SCAMP1-205ENST00000614488 OR52A4PA6NMU1 304 aa2.32□□□□□ -2.04
SCAMP1-205ENST00000614488 K7EM74 188 aa2.32□□□□□ -2.04
SCAMP1-205ENST00000614488 CXCL11O14625 94 aa2.32□□□□□ -2.04
SCAMP1-205ENST00000614488 SOCS1O15524 211 aa2.32□□□□□ -2.04
SCAMP1-205ENST00000614488 CHST1O43916 411 aa2.32□□□□□ -2.04
SCAMP1-205ENST00000614488 ERLIN1O75477 346 aa2.32□□□□□ -2.04
SCAMP1-205ENST00000614488 CD34P28906 385 aa2.32□□□□□ -2.04
SCAMP1-205ENST00000614488 KCNJ2P63252 427 aa2.32□□□□□ -2.04
SCAMP1-205ENST00000614488 MEF2BQ02080 365 aaPredicted RBP2.32□□□□□ -2.04
SCAMP1-205ENST00000614488 GPM6BQ13491 265 aa2.32□□□□□ -2.04
SCAMP1-205ENST00000614488 GK3PQ14409 553 aa2.32□□□□□ -2.04
SCAMP1-205ENST00000614488 PPP1R7Q15435 360 aa2.32□□□□□ -2.04
SCAMP1-205ENST00000614488 PTPN20Q4JDL3 420 aa2.32□□□□□ -2.04
SCAMP1-205ENST00000614488 LRRC23Q53EV4 343 aaPredicted RBP2.32□□□□□ -2.04
SCAMP1-205ENST00000614488 ORMDL2Q53FV1 153 aa2.32□□□□□ -2.04
SCAMP1-205ENST00000614488 AP1ARQ63HQ0 302 aa2.32□□□□□ -2.04
SCAMP1-205ENST00000614488 SAXO2Q658L1 398 aa2.32□□□□□ -2.04
SCAMP1-205ENST00000614488 ZFP1Q6P2D0 407 aa2.32□□□□□ -2.04
SCAMP1-205ENST00000614488 TMEM205Q6UW68 189 aa2.32□□□□□ -2.04
SCAMP1-205ENST00000614488 RUFY3Q7L099 469 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms