RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 FNDC8Q8TC99 324 aa8.93□□□□□ -0.98
CHMP2A-202ENST00000596708 TSPEARQ8WU66 669 aa8.93□□□□□ -0.98
CHMP2A-202ENST00000596708 LIPHQ8WWY8 451 aa8.93□□□□□ -0.98
CHMP2A-202ENST00000596708 DVL3Q92997 716 aaPredicted RBP8.93□□□□□ -0.98
CHMP2A-202ENST00000596708 POP5Q969H6 163 aaKnown RBP8.93□□□□□ -0.98
CHMP2A-202ENST00000596708 C4orf45Q96LM5 186 aa8.93□□□□□ -0.98
CHMP2A-202ENST00000596708 DUX5Q96PT3 197 aa8.93□□□□□ -0.98
CHMP2A-202ENST00000596708 GPA33Q99795 319 aa8.93□□□□□ -0.98
CHMP2A-202ENST00000596708 ECSITQ9BQ95 431 aa8.93□□□□□ -0.98
CHMP2A-202ENST00000596708 ALG12Q9BV10 488 aa8.93□□□□□ -0.98
CHMP2A-202ENST00000596708 ZNF747Q9BV97 191 aa8.93□□□□□ -0.98
CHMP2A-202ENST00000596708 POLR2J2Q9GZM3 115 aaKnown RBP8.93□□□□□ -0.98
CHMP2A-202ENST00000596708 POLR2J3Q9H1A7 115 aaKnown RBP8.93□□□□□ -0.98
CHMP2A-202ENST00000596708 WNT5BQ9H1J7 359 aa8.93□□□□□ -0.98
CHMP2A-202ENST00000596708 MMP26Q9NRE1 261 aa8.93□□□□□ -0.98
CHMP2A-202ENST00000596708 DCAF16Q9NXF7 216 aa8.93□□□□□ -0.98
CHMP2A-202ENST00000596708 KLHL21Q9UJP4 597 aa8.93□□□□□ -0.98
CHMP2A-202ENST00000596708 PURGQ9UJV8 347 aaKnown RBP8.93□□□□□ -0.98
CHMP2A-202ENST00000596708 NUP50Q9UKX7 468 aa8.93□□□□□ -0.98
CHMP2A-202ENST00000596708 AUP1Q9Y679 476 aa8.93□□□□□ -0.98
CHMP2A-202ENST00000596708 PPIAL4EA0A075B759 164 aa8.92□□□□□ -0.98
CHMP2A-202ENST00000596708 PPIAL4CA0A0B4J2A2 164 aa8.92□□□□□ -0.98
CHMP2A-202ENST00000596708 PPIAL4DF5H284 164 aa8.92□□□□□ -0.98
CHMP2A-202ENST00000596708 TMPRSS2O15393 492 aa8.92□□□□□ -0.98
CHMP2A-202ENST00000596708 PIP5K1CO60331 668 aa8.92□□□□□ -0.98
CHMP2A-202ENST00000596708 ABHD16AO95870 558 aa8.92□□□□□ -0.98
CHMP2A-202ENST00000596708 FSHBP01225 129 aa8.92□□□□□ -0.98
CHMP2A-202ENST00000596708 IGF2P01344 180 aa8.92□□□□□ -0.98
CHMP2A-202ENST00000596708 IFNA14P01570 189 aa8.92□□□□□ -0.98
CHMP2A-202ENST00000596708 IGHV2-70P01814 119 aa8.92□□□□□ -0.98
CHMP2A-202ENST00000596708 CD55P08174 381 aa8.92□□□□□ -0.98
CHMP2A-202ENST00000596708 ADH4P08319 380 aa8.92□□□□□ -0.98
CHMP2A-202ENST00000596708 TSPAN19P0C672 248 aa8.92□□□□□ -0.98
CHMP2A-202ENST00000596708 PPIAL4FP0DN26 164 aa8.92□□□□□ -0.98
CHMP2A-202ENST00000596708 IFI30P13284 250 aa8.92□□□□□ -0.98
CHMP2A-202ENST00000596708 TNFRSF1AP19438 455 aa8.92□□□□□ -0.98
CHMP2A-202ENST00000596708 TNFSF4P23510 183 aa8.92□□□□□ -0.98
CHMP2A-202ENST00000596708 PRTN3P24158 256 aa8.92□□□□□ -0.98
CHMP2A-202ENST00000596708 IFNA8P32881 189 aa8.92□□□□□ -0.98
CHMP2A-202ENST00000596708 CRYBA2P53672 197 aa8.92□□□□□ -0.98
CHMP2A-202ENST00000596708 RPL27P61353 136 aaKnown RBP8.92□□□□□ -0.98
CHMP2A-202ENST00000596708 PSG7Q13046 419 aa8.92□□□□□ -0.98
CHMP2A-202ENST00000596708 BAMBIQ13145 260 aa8.92□□□□□ -0.98
CHMP2A-202ENST00000596708 HNRNPA0Q13151 305 aaKnown RBP8.92□□□□□ -0.98
CHMP2A-202ENST00000596708 ZER1Q7Z7L7 766 aa8.92□□□□□ -0.98
CHMP2A-202ENST00000596708 IGFN1Q86VF2 1251 aa8.92□□□□□ -0.98
CHMP2A-202ENST00000596708 SPICQ8N5J4 248 aa8.92□□□□□ -0.98
CHMP2A-202ENST00000596708 CLDN22Q8N7P3 220 aa8.92□□□□□ -0.98
CHMP2A-202ENST00000596708 OR2Z1Q8NG97 314 aa8.92□□□□□ -0.98
CHMP2A-202ENST00000596708 NMD3Q96D46 503 aaKnown RBP8.92□□□□□ -0.98
CHMP2A-202ENST00000596708 SH3GL1Q99961 368 aa8.92□□□□□ -0.98
CHMP2A-202ENST00000596708 MRI1Q9BV20 369 aa8.92□□□□□ -0.98
CHMP2A-202ENST00000596708 C1QTNF5Q9BXJ0 243 aa8.92□□□□□ -0.98
CHMP2A-202ENST00000596708 PATZ1Q9HBE1 687 aaKnown RBP8.92□□□□□ -0.98
CHMP2A-202ENST00000596708 NPHS2Q9NP85 383 aa8.92□□□□□ -0.98
CHMP2A-202ENST00000596708 TMEM106BQ9NUM4 274 aa8.92□□□□□ -0.98
CHMP2A-202ENST00000596708 INTS9Q9NV88 658 aaKnown RBP8.92□□□□□ -0.98
CHMP2A-202ENST00000596708 ZNF69Q9UC07 566 aa8.92□□□□□ -0.98
CHMP2A-202ENST00000596708 TENM1Q9UKZ4 2725 aa8.91□□□□□ -0.98
CHMP2A-202ENST00000596708 NPIPB13A6NJU9 1138 aa8.91□□□□□ -0.98
CHMP2A-202ENST00000596708 NPIPB4C9JG80 1138 aa8.91□□□□□ -0.98
CHMP2A-202ENST00000596708 TRAPPC2LH3BP13 241 aa8.91□□□□□ -0.98
CHMP2A-202ENST00000596708 H3BSA7 217 aa8.91□□□□□ -0.98
CHMP2A-202ENST00000596708 IGHMP01871 453 aa8.91□□□□□ -0.98
CHMP2A-202ENST00000596708 THRBP10828 461 aa8.91□□□□□ -0.98
CHMP2A-202ENST00000596708 GSTM3P21266 225 aa8.91□□□□□ -0.98
CHMP2A-202ENST00000596708 MSR1P21757 451 aa8.91□□□□□ -0.98
CHMP2A-202ENST00000596708 RBMXP38159 391 aaKnown RBP8.91□□□□□ -0.98
CHMP2A-202ENST00000596708 ST3GAL3Q11203 375 aa8.91□□□□□ -0.98
CHMP2A-202ENST00000596708 ZNF154Q13106 437 aa8.91□□□□□ -0.98
CHMP2A-202ENST00000596708 CDK5R2Q13319 367 aa8.91□□□□□ -0.98
CHMP2A-202ENST00000596708 RABL3Q5HYI8 236 aa8.91□□□□□ -0.98
CHMP2A-202ENST00000596708 DOK3Q7L591 496 aa8.91□□□□□ -0.98
CHMP2A-202ENST00000596708 MICU2Q8IYU8 434 aa8.91□□□□□ -0.98
CHMP2A-202ENST00000596708 BCL6BQ8N143 479 aaPredicted RBP8.91□□□□□ -0.98
CHMP2A-202ENST00000596708 DEFB108BQ8NET1 73 aa8.91□□□□□ -0.98
CHMP2A-202ENST00000596708 OR51A7Q8NH64 312 aa8.91□□□□□ -0.98
CHMP2A-202ENST00000596708 LRRC58Q96CX6 371 aa8.91□□□□□ -0.98
CHMP2A-202ENST00000596708 BPIFA2Q96DR5 249 aa8.91□□□□□ -0.98
CHMP2A-202ENST00000596708 TPD52L3Q96J77 140 aa8.91□□□□□ -0.98
CHMP2A-202ENST00000596708 ATP6V1G3Q96LB4 118 aa8.91□□□□□ -0.98
CHMP2A-202ENST00000596708 SAMD8Q96LT4 415 aa8.91□□□□□ -0.98
CHMP2A-202ENST00000596708 MS4A7Q9GZW8 240 aaPredicted RBP8.91□□□□□ -0.98
CHMP2A-202ENST00000596708 PLEK2Q9NYT0 353 aa8.91□□□□□ -0.98
CHMP2A-202ENST00000596708 NDRG4Q9ULP0 352 aaKnown RBP8.91□□□□□ -0.98
CHMP2A-202ENST00000596708 HIF3AQ9Y2N7 669 aa8.91□□□□□ -0.98
CHMP2A-202ENST00000596708 INSIG2Q9Y5U4 225 aa8.91□□□□□ -0.98
CHMP2A-202ENST00000596708 TRAV27A0A087WT01 109 aa8.9□□□□□ -0.98
CHMP2A-202ENST00000596708 A0A0G2JND7 137 aa8.9□□□□□ -0.98
CHMP2A-202ENST00000596708 DNAJC9-AS1A6NH13 148 aa8.9□□□□□ -0.98
CHMP2A-202ENST00000596708 A6NIZ1 184 aa8.9□□□□□ -0.98
CHMP2A-202ENST00000596708 C12orf71A8MTZ7 269 aa8.9□□□□□ -0.98
CHMP2A-202ENST00000596708 FBP2O00757 339 aa8.9□□□□□ -0.98
CHMP2A-202ENST00000596708 ZNF12P17014 697 aa8.9□□□□□ -0.98
CHMP2A-202ENST00000596708 HTR5AP47898 357 aa8.9□□□□□ -0.98
CHMP2A-202ENST00000596708 SLC6A9P48067 706 aa8.9□□□□□ -0.98
CHMP2A-202ENST00000596708 RAP1BP61224 184 aa8.9□□□□□ -0.98
CHMP2A-202ENST00000596708 SEC61A1P61619 476 aaKnown RBP8.9□□□□□ -0.98
CHMP2A-202ENST00000596708 RAP1AP62834 184 aa8.9□□□□□ -0.98
CHMP2A-202ENST00000596708 ENDOGQ14249 297 aaKnown RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms