RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 VPS13CQ709C8 3753 aa12.46□□□□□ -0.42
MKS1-207ENST00000578789 TMEM129A0AVI4 362 aa12.45□□□□□ -0.42
MKS1-207ENST00000578789 TRIM64A6NGJ6 449 aa12.45□□□□□ -0.42
MKS1-207ENST00000578789 TRIM64BA6NI03 449 aa12.45□□□□□ -0.42
MKS1-207ENST00000578789 DCTN6O00399 190 aa12.45□□□□□ -0.42
MKS1-207ENST00000578789 ICMTO60725 284 aa12.45□□□□□ -0.42
MKS1-207ENST00000578789 RENP00797 406 aa12.45□□□□□ -0.42
MKS1-207ENST00000578789 COX5BP10606 129 aa12.45□□□□□ -0.42
MKS1-207ENST00000578789 CCL2P13500 99 aa12.45□□□□□ -0.42
MKS1-207ENST00000578789 STOMP27105 288 aa12.45□□□□□ -0.42
MKS1-207ENST00000578789 APEX1P27695 318 aaKnown RBP12.45□□□□□ -0.42
MKS1-207ENST00000578789 NOS3P29474 1203 aa12.45□□□□□ -0.42
MKS1-207ENST00000578789 APLNRP35414 380 aa12.45□□□□□ -0.42
MKS1-207ENST00000578789 EVX1P49640 407 aa12.45□□□□□ -0.42
MKS1-207ENST00000578789 LSM6P62312 80 aaKnown RBP12.45□□□□□ -0.42
MKS1-207ENST00000578789 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.45□□□□□ -0.42
MKS1-207ENST00000578789 SCRN3Q0VDG4 424 aa12.45□□□□□ -0.42
MKS1-207ENST00000578789 COX10Q12887 443 aa12.45□□□□□ -0.42
MKS1-207ENST00000578789 AQP6Q13520 282 aa12.45□□□□□ -0.42
MKS1-207ENST00000578789 RAB35Q15286 201 aa12.45□□□□□ -0.42
MKS1-207ENST00000578789 CLEC12AQ5QGZ9 265 aa12.45□□□□□ -0.42
MKS1-207ENST00000578789 UGT2A3Q6UWM9 527 aa12.45□□□□□ -0.42
MKS1-207ENST00000578789 ASRGL1Q7L266 308 aa12.45□□□□□ -0.42
MKS1-207ENST00000578789 ZBTB46Q86UZ6 589 aa12.45□□□□□ -0.42
MKS1-207ENST00000578789 LNX2Q8N448 690 aa12.45□□□□□ -0.42
MKS1-207ENST00000578789 SDR9C7Q8NEX9 313 aa12.45□□□□□ -0.42
MKS1-207ENST00000578789 OR4K13Q8NH42 304 aa12.45□□□□□ -0.42
MKS1-207ENST00000578789 AKR7LQ8NHP1 331 aa12.45□□□□□ -0.42
MKS1-207ENST00000578789 FOXN4Q96NZ1 517 aa12.45□□□□□ -0.42
MKS1-207ENST00000578789 DDOQ99489 341 aa12.45□□□□□ -0.42
MKS1-207ENST00000578789 FEVQ99581 238 aa12.45□□□□□ -0.42
MKS1-207ENST00000578789 DOK1Q99704 481 aa12.45□□□□□ -0.42
MKS1-207ENST00000578789 NIPSNAP1Q9BPW8 284 aa12.45□□□□□ -0.42
MKS1-207ENST00000578789 MRPL37Q9BZE1 423 aaKnown RBP12.45□□□□□ -0.42
MKS1-207ENST00000578789 DNAJB9Q9UBS3 223 aa12.45□□□□□ -0.42
MKS1-207ENST00000578789 B9D1Q9UPM9 204 aa12.45□□□□□ -0.42
MKS1-207ENST00000578789 BAIAP2Q9UQB8 552 aa12.45□□□□□ -0.42
MKS1-207ENST00000578789 FKBP7Q9Y680 259 aa12.45□□□□□ -0.42
MKS1-207ENST00000578789 ACANP16112 2415 aa12.45□□□□□ -0.42
MKS1-207ENST00000578789 LOC100509620A0A075B734 347 aa12.44□□□□□ -0.42
MKS1-207ENST00000578789 OR6C68A6NDL8 312 aa12.44□□□□□ -0.42
MKS1-207ENST00000578789 GNGT2O14610 69 aa12.44□□□□□ -0.42
MKS1-207ENST00000578789 SOX14O95416 240 aa12.44□□□□□ -0.42
MKS1-207ENST00000578789 ERFP50548 548 aa12.44□□□□□ -0.42
MKS1-207ENST00000578789 EFNA4P52798 201 aa12.44□□□□□ -0.42
MKS1-207ENST00000578789 NUDT6P53370 316 aa12.44□□□□□ -0.42
MKS1-207ENST00000578789 ZNF774Q6NX45 483 aa12.44□□□□□ -0.42
MKS1-207ENST00000578789 ALDH16A1Q8IZ83 802 aa12.44□□□□□ -0.42
MKS1-207ENST00000578789 OR6V1Q8N148 313 aa12.44□□□□□ -0.42
MKS1-207ENST00000578789 SVOPLQ8N434 492 aa12.44□□□□□ -0.42
MKS1-207ENST00000578789 NPEPL1Q8NDH3 523 aa12.44□□□□□ -0.42
MKS1-207ENST00000578789 OR52E2Q8NGJ4 325 aa12.44□□□□□ -0.42
MKS1-207ENST00000578789 OR4Q3Q8NH05 313 aa12.44□□□□□ -0.42
MKS1-207ENST00000578789 C11orf40Q8WZ69 217 aa12.44□□□□□ -0.42
MKS1-207ENST00000578789 DUS3LQ96G46 650 aaKnown RBP12.44□□□□□ -0.42
MKS1-207ENST00000578789 TSSK2Q96PF2 358 aa12.44□□□□□ -0.42
MKS1-207ENST00000578789 SORCS2Q96PQ0 1159 aa12.44□□□□□ -0.42
MKS1-207ENST00000578789 TSSK6Q9BXA6 273 aa12.44□□□□□ -0.42
MKS1-207ENST00000578789 BCL2L14Q9BZR8 327 aa12.44□□□□□ -0.42
MKS1-207ENST00000578789 OCEL1Q9H607 264 aa12.44□□□□□ -0.42
MKS1-207ENST00000578789 RERGLQ9H628 205 aa12.44□□□□□ -0.42
MKS1-207ENST00000578789 RPRD1BQ9NQG5 326 aaKnown RBP12.44□□□□□ -0.42
MKS1-207ENST00000578789 ARMC1Q9NVT9 282 aa12.44□□□□□ -0.42
MKS1-207ENST00000578789 NDRG4Q9ULP0 352 aaKnown RBP12.44□□□□□ -0.42
MKS1-207ENST00000578789 H7C1Q1 480 aa12.43□□□□□ -0.42
MKS1-207ENST00000578789 SSX4O60224 188 aa12.43□□□□□ -0.42
MKS1-207ENST00000578789 DOK2O60496 412 aa12.43□□□□□ -0.42
MKS1-207ENST00000578789 E2F6O75461 281 aa12.43□□□□□ -0.42
MKS1-207ENST00000578789 MPZL1O95297 269 aa12.43□□□□□ -0.42
MKS1-207ENST00000578789 IGFBP1P08833 259 aaPredicted RBP12.43□□□□□ -0.42
MKS1-207ENST00000578789 INHBBP09529 407 aa12.43□□□□□ -0.42
MKS1-207ENST00000578789 FAM157BP0CG42 384 aa12.43□□□□□ -0.42
MKS1-207ENST00000578789 WNT5AP41221 380 aa12.43□□□□□ -0.42
MKS1-207ENST00000578789 RAD52P43351 418 aa12.43□□□□□ -0.42
MKS1-207ENST00000578789 GDI2P50395 445 aaKnown RBP12.43□□□□□ -0.42
MKS1-207ENST00000578789 UCP2P55851 309 aa12.43□□□□□ -0.42
MKS1-207ENST00000578789 TNK1Q13470 666 aa12.43□□□□□ -0.42
MKS1-207ENST00000578789 ZNF362Q5T0B9 420 aaPredicted RBP12.43□□□□□ -0.42
MKS1-207ENST00000578789 SLC35F1Q5T1Q4 408 aa12.43□□□□□ -0.42
MKS1-207ENST00000578789 C1orf146Q5VVC0 180 aa12.43□□□□□ -0.42
MKS1-207ENST00000578789 RGS7BPQ6MZT1 257 aaPredicted RBP12.43□□□□□ -0.42
MKS1-207ENST00000578789 CIARTQ8N365 385 aaPredicted RBP12.43□□□□□ -0.42
MKS1-207ENST00000578789 SLC26A10Q8NG04 563 aa12.43□□□□□ -0.42
MKS1-207ENST00000578789 OR2T33Q8NG76 320 aa12.43□□□□□ -0.42
MKS1-207ENST00000578789 UTP4Q969X6 686 aaKnown RBP12.43□□□□□ -0.42
MKS1-207ENST00000578789 FN3KQ9H479 309 aa12.43□□□□□ -0.42
MKS1-207ENST00000578789 PDP1Q9P0J1 537 aaPredicted RBP12.43□□□□□ -0.42
MKS1-207ENST00000578789 REV1Q9UBZ9 1251 aa12.43□□□□□ -0.42
MKS1-207ENST00000578789 ATPIF1Q9UII2 106 aa12.43□□□□□ -0.42
MKS1-207ENST00000578789 CHD3Q12873 2000 aaKnown RBP12.42□□□□□ -0.42
MKS1-207ENST00000578789 IGLV3-9A0A075B6K5 115 aa12.42□□□□□ -0.42
MKS1-207ENST00000578789 C5orf49A4QMS7 147 aa12.42□□□□□ -0.42
MKS1-207ENST00000578789 SGCEO43556 437 aa12.42□□□□□ -0.42
MKS1-207ENST00000578789 DEAF1O75398 565 aaPredicted RBP12.42□□□□□ -0.42
MKS1-207ENST00000578789 TIPRLO75663 272 aa12.42□□□□□ -0.42
MKS1-207ENST00000578789 F12P00748 615 aaPredicted RBP12.42□□□□□ -0.42
MKS1-207ENST00000578789 CSF3P09919 207 aa12.42□□□□□ -0.42
MKS1-207ENST00000578789 ZNF250P15622 560 aa12.42□□□□□ -0.42
MKS1-207ENST00000578789 DSCR9P59020 149 aa12.42□□□□□ -0.42
MKS1-207ENST00000578789 GLO1Q04760 184 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms