RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 DLEU7Q6UYE1 221 aa15.78■□□□□ 0.12
SHANK1-201ENST00000293441 EGFL6Q8IUX8 553 aa15.78■□□□□ 0.12
SHANK1-201ENST00000293441 KIRREL1Q96J84 757 aa15.78■□□□□ 0.12
SHANK1-201ENST00000293441 C1QTNF3Q9BXJ4 246 aa15.78■□□□□ 0.12
SHANK1-201ENST00000293441 SHROOM3Q8TF72 1996 aa15.78■□□□□ 0.12
SHANK1-201ENST00000293441 CLINT1Q14677 625 aa15.78■□□□□ 0.12
SHANK1-201ENST00000293441 ALKBH6Q3KRA9 238 aa15.78■□□□□ 0.12
SHANK1-201ENST00000293441 IL21Q9HBE4 155 aa15.78■□□□□ 0.12
SHANK1-201ENST00000293441 PIPP12273 146 aaPredicted RBP15.78■□□□□ 0.12
SHANK1-201ENST00000293441 ACVR1Q04771 509 aa15.78■□□□□ 0.12
SHANK1-201ENST00000293441 ACKR1Q16570 336 aa15.78■□□□□ 0.12
SHANK1-201ENST00000293441 CDONQ4KMG0 1287 aa15.78■□□□□ 0.12
SHANK1-201ENST00000293441 THEM4Q5T1C6 240 aa15.78■□□□□ 0.12
SHANK1-201ENST00000293441 TMPRSS7Q7RTY8 843 aa15.78■□□□□ 0.12
SHANK1-201ENST00000293441 OR6M1Q8NGM8 313 aa15.78■□□□□ 0.12
SHANK1-201ENST00000293441 TEAD3Q99594 435 aa15.78■□□□□ 0.12
SHANK1-201ENST00000293441 TEX101Q9BY14 249 aa15.78■□□□□ 0.12
SHANK1-201ENST00000293441 ASB1Q9Y576 335 aa15.78■□□□□ 0.12
SHANK1-201ENST00000293441 PRRC2BQ5JSZ5 2229 aaKnown RBP15.78■□□□□ 0.12
SHANK1-201ENST00000293441 APOA2P02652 100 aa15.78■□□□□ 0.12
SHANK1-201ENST00000293441 SDHAP31040 664 aa15.78■□□□□ 0.12
SHANK1-201ENST00000293441 USP51Q70EK9 711 aa15.78■□□□□ 0.12
SHANK1-201ENST00000293441 FAM213BQ8TBF2 198 aa15.78■□□□□ 0.12
SHANK1-201ENST00000293441 SRPXP78539 464 aa15.78■□□□□ 0.12
SHANK1-201ENST00000293441 FJX1Q86VR8 437 aa15.78■□□□□ 0.12
SHANK1-201ENST00000293441 FBXL6Q8N531 539 aa15.78■□□□□ 0.12
SHANK1-201ENST00000293441 OR51A2Q8NGJ7 313 aa15.78■□□□□ 0.12
SHANK1-201ENST00000293441 OR52N1Q8NH53 320 aa15.78■□□□□ 0.12
SHANK1-201ENST00000293441 PLA2G2FQ9BZM2 168 aa15.78■□□□□ 0.12
SHANK1-201ENST00000293441 ERVMER34-1Q9H9K5 563 aa15.78■□□□□ 0.12
SHANK1-201ENST00000293441 RANGRFQ9HD47 186 aaPredicted RBP15.78■□□□□ 0.12
SHANK1-201ENST00000293441 E9PI62 339 aa15.77■□□□□ 0.12
SHANK1-201ENST00000293441 RAP2BP61225 183 aa15.77■□□□□ 0.12
SHANK1-201ENST00000293441 KDM4DQ6B0I6 523 aa15.77■□□□□ 0.12
SHANK1-201ENST00000293441 OR10X1Q8NGY0 326 aa15.77■□□□□ 0.12
SHANK1-201ENST00000293441 TNRC6CQ9HCJ0 1690 aaKnown RBP15.77■□□□□ 0.12
SHANK1-201ENST00000293441 VAMP5O95183 116 aa15.77■□□□□ 0.12
SHANK1-201ENST00000293441 CLEC2LP0C7M8 214 aa15.77■□□□□ 0.12
SHANK1-201ENST00000293441 HABP2Q14520 560 aaPredicted RBP15.77■□□□□ 0.12
SHANK1-201ENST00000293441 BIN3Q9NQY0 253 aa15.77■□□□□ 0.12
SHANK1-201ENST00000293441 ZNF225Q9UK10 706 aa15.77■□□□□ 0.12
SHANK1-201ENST00000293441 I6L893 689 aaPredicted RBP15.77■□□□□ 0.12
SHANK1-201ENST00000293441 CSF3P09919 207 aa15.77■□□□□ 0.12
SHANK1-201ENST00000293441 PSMB1P20618 241 aaKnown RBP15.77■□□□□ 0.12
SHANK1-201ENST00000293441 NPBWR1P48145 328 aa15.77■□□□□ 0.12
SHANK1-201ENST00000293441 RBP2P50120 134 aa15.77■□□□□ 0.12
SHANK1-201ENST00000293441 GFRALQ6UXV0 394 aa15.77■□□□□ 0.12
SHANK1-201ENST00000293441 PRSS45Q7RTY3 260 aa15.77■□□□□ 0.12
SHANK1-201ENST00000293441 SIAH3Q8IW03 269 aa15.77■□□□□ 0.12
SHANK1-201ENST00000293441 TAAR9Q96RI9 348 aa15.77■□□□□ 0.12
SHANK1-201ENST00000293441 ZNF195O14628 629 aa15.77■□□□□ 0.11
SHANK1-201ENST00000293441 NLRP8Q86W28 1048 aa15.77■□□□□ 0.11
SHANK1-201ENST00000293441 OR51F2Q8NH61 342 aa15.77■□□□□ 0.11
SHANK1-201ENST00000293441 C3orf49Q96BT1 292 aa15.77■□□□□ 0.11
SHANK1-201ENST00000293441 GPR78Q96P69 363 aa15.77■□□□□ 0.11
SHANK1-201ENST00000293441 ZPBPQ9BS86 351 aa15.77■□□□□ 0.11
SHANK1-201ENST00000293441 SIRPB1O00241 398 aa15.77■□□□□ 0.11
SHANK1-201ENST00000293441 IGFBP1P08833 259 aaPredicted RBP15.77■□□□□ 0.11
SHANK1-201ENST00000293441 RPL34P49207 117 aaKnown RBP15.77■□□□□ 0.11
SHANK1-201ENST00000293441 AARDQ4LEZ3 155 aa15.77■□□□□ 0.11
SHANK1-201ENST00000293441 HES7Q9BYE0 225 aa15.77■□□□□ 0.11
SHANK1-201ENST00000293441 OR2W5A6NFC9 320 aa15.76■□□□□ 0.11
SHANK1-201ENST00000293441 ACOT8O14734 319 aa15.76■□□□□ 0.11
SHANK1-201ENST00000293441 IL34Q6ZMJ4 242 aa15.76■□□□□ 0.11
SHANK1-201ENST00000293441 BCO1Q9HAY6 547 aa15.76■□□□□ 0.11
SHANK1-201ENST00000293441 SLC39A9Q9NUM3 307 aa15.76■□□□□ 0.11
SHANK1-201ENST00000293441 GNG13Q9P2W3 67 aa15.76■□□□□ 0.11
SHANK1-201ENST00000293441 CRYAAP02489 173 aa15.76■□□□□ 0.11
SHANK1-201ENST00000293441 CCR6P51684 374 aa15.76■□□□□ 0.11
SHANK1-201ENST00000293441 ARL16Q0P5N6 197 aa15.76■□□□□ 0.11
SHANK1-201ENST00000293441 ASTLQ6HA08 431 aaPredicted RBP15.76■□□□□ 0.11
SHANK1-201ENST00000293441 ROBO4Q8WZ75 1007 aa15.76■□□□□ 0.11
SHANK1-201ENST00000293441 POFUT1Q9H488 388 aa15.76■□□□□ 0.11
SHANK1-201ENST00000293441 UBL3O95164 117 aa15.76■□□□□ 0.11
SHANK1-201ENST00000293441 GLRA1P23415 457 aa15.76■□□□□ 0.11
SHANK1-201ENST00000293441 GPR3P46089 330 aa15.76■□□□□ 0.11
SHANK1-201ENST00000293441 KCNIP4Q6PIL6 250 aa15.76■□□□□ 0.11
SHANK1-201ENST00000293441 CATSPERDQ86XM0 798 aa15.76■□□□□ 0.11
SHANK1-201ENST00000293441 OR5M9Q8NGP3 310 aa15.76■□□□□ 0.11
SHANK1-201ENST00000293441 RHOXF1Q8NHV9 184 aa15.76■□□□□ 0.11
SHANK1-201ENST00000293441 ST7LQ8TDW4 575 aa15.76■□□□□ 0.11
SHANK1-201ENST00000293441 HPSE2Q8WWQ2 592 aa15.76■□□□□ 0.11
SHANK1-201ENST00000293441 TPPP3Q9BW30 176 aa15.76■□□□□ 0.11
SHANK1-201ENST00000293441 KLK4Q9Y5K2 254 aa15.76■□□□□ 0.11
SHANK1-201ENST00000293441 PAPPA2Q9BXP8 1791 aa15.76■□□□□ 0.11
SHANK1-201ENST00000293441 LOC107986453A0A1B0GWG9 222 aa15.76■□□□□ 0.11
SHANK1-201ENST00000293441 SH2D1BO14796 132 aa15.76■□□□□ 0.11
SHANK1-201ENST00000293441 ACHEP22303 614 aa15.76■□□□□ 0.11
SHANK1-201ENST00000293441 BSGP35613 385 aa15.76■□□□□ 0.11
SHANK1-201ENST00000293441 SNRPGP62308 76 aaKnown RBP15.76■□□□□ 0.11
SHANK1-201ENST00000293441 RPL18Q07020 188 aaKnown RBP15.76■□□□□ 0.11
SHANK1-201ENST00000293441 KMT5CQ86Y97 462 aa15.76■□□□□ 0.11
SHANK1-201ENST00000293441 OR2L13Q8N349 312 aa15.76■□□□□ 0.11
SHANK1-201ENST00000293441 SLCO4A1Q96BD0 722 aa15.76■□□□□ 0.11
SHANK1-201ENST00000293441 MVB12AQ96EY5 273 aa15.76■□□□□ 0.11
SHANK1-201ENST00000293441 REEP6Q96HR9 211 aa15.76■□□□□ 0.11
SHANK1-201ENST00000293441 OXGR1Q96P68 337 aa15.76■□□□□ 0.11
SHANK1-201ENST00000293441 TCEAL2Q9H3H9 227 aaPredicted RBP15.76■□□□□ 0.11
SHANK1-201ENST00000293441 CTSFQ9UBX1 484 aa15.76■□□□□ 0.11
SHANK1-201ENST00000293441 SLC22A20A6NK97 555 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms