RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 Q96MF0 132 aa12.49□□□□□ -0.41
MKS1-207ENST00000578789 ERMAPQ96PL5 475 aaPredicted RBP12.49□□□□□ -0.41
MKS1-207ENST00000578789 WACQ9BTA9 647 aa12.49□□□□□ -0.41
MKS1-207ENST00000578789 DGCR6LQ9BY27 220 aa12.49□□□□□ -0.41
MKS1-207ENST00000578789 SYT4Q9H2B2 425 aa12.49□□□□□ -0.41
MKS1-207ENST00000578789 LRMDAQ9H2I8 198 aa12.49□□□□□ -0.41
MKS1-207ENST00000578789 MMADHCQ9H3L0 296 aaPredicted RBP12.49□□□□□ -0.41
MKS1-207ENST00000578789 PLK3Q9H4B4 646 aa12.49□□□□□ -0.41
MKS1-207ENST00000578789 BARX1Q9HBU1 254 aaPredicted RBP12.49□□□□□ -0.41
MKS1-207ENST00000578789 CCNB1IP1Q9NPC3 277 aa12.49□□□□□ -0.41
MKS1-207ENST00000578789 IL20Q9NYY1 176 aa12.49□□□□□ -0.41
MKS1-207ENST00000578789 SPEF1Q9Y4P9 236 aa12.49□□□□□ -0.41
MKS1-207ENST00000578789 U3KQV3 271 aa12.49□□□□□ -0.41
MKS1-207ENST00000578789 IQCMA0A1B0GVH7 501 aa12.48□□□□□ -0.41
MKS1-207ENST00000578789 B9A039 149 aa12.48□□□□□ -0.41
MKS1-207ENST00000578789 IDH3BO43837 385 aa12.48□□□□□ -0.41
MKS1-207ENST00000578789 KHDRBS3O75525 346 aaKnown RBP12.48□□□□□ -0.41
MKS1-207ENST00000578789 SNAP29O95721 258 aa12.48□□□□□ -0.41
MKS1-207ENST00000578789 CST1P01037 141 aa12.48□□□□□ -0.41
MKS1-207ENST00000578789 GASTP01350 101 aa12.48□□□□□ -0.41
MKS1-207ENST00000578789 SCG5P05408 212 aa12.48□□□□□ -0.41
MKS1-207ENST00000578789 OR4A8P0C604 315 aa12.48□□□□□ -0.41
MKS1-207ENST00000578789 BMP4P12644 408 aa12.48□□□□□ -0.41
MKS1-207ENST00000578789 FOSL1P15407 271 aa12.48□□□□□ -0.41
MKS1-207ENST00000578789 LAP3P28838 519 aa12.48□□□□□ -0.41
MKS1-207ENST00000578789 CDKN2AP42771 156 aaKnown RBP12.48□□□□□ -0.41
MKS1-207ENST00000578789 GUCA1AP43080 201 aaPredicted RBP12.48□□□□□ -0.41
MKS1-207ENST00000578789 SNRPD2P62316 118 aaKnown RBP12.48□□□□□ -0.41
MKS1-207ENST00000578789 PABPC1L2AQ5JQF8 200 aa12.48□□□□□ -0.41
MKS1-207ENST00000578789 VHLLQ6RSH7 139 aa12.48□□□□□ -0.41
MKS1-207ENST00000578789 DNM1P46Q6ZS02 220 aa12.48□□□□□ -0.41
MKS1-207ENST00000578789 SYT9Q86SS6 491 aa12.48□□□□□ -0.41
MKS1-207ENST00000578789 OR10G2Q8NGC3 310 aa12.48□□□□□ -0.41
MKS1-207ENST00000578789 OR52L1Q8NGH7 329 aa12.48□□□□□ -0.41
MKS1-207ENST00000578789 IFT27Q9BW83 186 aa12.48□□□□□ -0.41
MKS1-207ENST00000578789 EGLN3Q9H6Z9 239 aa12.48□□□□□ -0.41
MKS1-207ENST00000578789 YY1AP1Q9H869 796 aa12.48□□□□□ -0.41
MKS1-207ENST00000578789 GDF2Q9UK05 429 aaPredicted RBP12.48□□□□□ -0.41
MKS1-207ENST00000578789 ZNF469Q96JG9 3925 aaPredicted RBP12.47□□□□□ -0.41
MKS1-207ENST00000578789 MAP1AP78559 2803 aaPredicted RBP12.47□□□□□ -0.41
MKS1-207ENST00000578789 BHLHE40O14503 412 aa12.47□□□□□ -0.41
MKS1-207ENST00000578789 GPRIN2O60269 458 aa12.47□□□□□ -0.41
MKS1-207ENST00000578789 SLC16A7O60669 478 aa12.47□□□□□ -0.41
MKS1-207ENST00000578789 NDUFS7O75251 213 aa12.47□□□□□ -0.41
MKS1-207ENST00000578789 FKBP6O75344 327 aa12.47□□□□□ -0.41
MKS1-207ENST00000578789 HIST1H1CP16403 213 aaKnown RBP12.47□□□□□ -0.41
MKS1-207ENST00000578789 GSTM3P21266 225 aa12.47□□□□□ -0.41
MKS1-207ENST00000578789 GLRXP35754 106 aa12.47□□□□□ -0.41
MKS1-207ENST00000578789 PPOXP50336 477 aa12.47□□□□□ -0.41
MKS1-207ENST00000578789 PCBD1P61457 104 aa12.47□□□□□ -0.41
MKS1-207ENST00000578789 RPS23P62266 143 aaKnown RBP12.47□□□□□ -0.41
MKS1-207ENST00000578789 PSG4Q00888 419 aa12.47□□□□□ -0.41
MKS1-207ENST00000578789 GALK2Q01415 458 aa12.47□□□□□ -0.41
MKS1-207ENST00000578789 HSF2Q03933 536 aa12.47□□□□□ -0.41
MKS1-207ENST00000578789 PLP2Q04941 152 aa12.47□□□□□ -0.41
MKS1-207ENST00000578789 TBC1D28Q2M2D7 210 aa12.47□□□□□ -0.41
MKS1-207ENST00000578789 DNM1P34Q6PK57 102 aa12.47□□□□□ -0.41
MKS1-207ENST00000578789 CD300LDQ6UXZ3 194 aa12.47□□□□□ -0.41
MKS1-207ENST00000578789 JAZF1Q86VZ6 243 aa12.47□□□□□ -0.41
MKS1-207ENST00000578789 PAQR4Q8N4S7 273 aaPredicted RBP12.47□□□□□ -0.41
MKS1-207ENST00000578789 CPEB3Q8NE35 698 aaKnown RBP12.47□□□□□ -0.41
MKS1-207ENST00000578789 OR8D4Q8NGM9 314 aa12.47□□□□□ -0.41
MKS1-207ENST00000578789 OR1J2Q8NGS2 313 aa12.47□□□□□ -0.41
MKS1-207ENST00000578789 ZNF416Q9BWM5 594 aa12.47□□□□□ -0.41
MKS1-207ENST00000578789 PLA2G12AQ9BZM1 189 aa12.47□□□□□ -0.41
MKS1-207ENST00000578789 OR2H1Q9GZK4 316 aa12.47□□□□□ -0.41
MKS1-207ENST00000578789 NUAK2Q9H093 628 aa12.47□□□□□ -0.41
MKS1-207ENST00000578789 RACGAP1Q9H0H5 632 aa12.47□□□□□ -0.41
MKS1-207ENST00000578789 CDH20Q9HBT6 801 aa12.47□□□□□ -0.41
MKS1-207ENST00000578789 FBXO9Q9UK97 447 aaPredicted RBP12.47□□□□□ -0.41
MKS1-207ENST00000578789 PMF1-BGLAPU3KQ54 211 aa12.47□□□□□ -0.41
MKS1-207ENST00000578789 TEP1Q99973 2627 aaKnown RBP12.47□□□□□ -0.41
MKS1-207ENST00000578789 IGLV1-36A0A0B4J1U3 117 aa12.46□□□□□ -0.41
MKS1-207ENST00000578789 C12orf71A8MTZ7 269 aa12.46□□□□□ -0.41
MKS1-207ENST00000578789 VSTM5A8MXK1 200 aa12.46□□□□□ -0.41
MKS1-207ENST00000578789 TP53P04637 393 aaPredicted RBP12.46□□□□□ -0.41
MKS1-207ENST00000578789 GAAP10253 952 aa12.46□□□□□ -0.41
MKS1-207ENST00000578789 PCSK6P29122 969 aa12.46□□□□□ -0.41
MKS1-207ENST00000578789 CRABP1P29762 137 aa12.46□□□□□ -0.41
MKS1-207ENST00000578789 CBX1P83916 185 aa12.46□□□□□ -0.41
MKS1-207ENST00000578789 KCNMB1Q16558 191 aa12.46□□□□□ -0.41
MKS1-207ENST00000578789 MSMPQ1L6U9 139 aa12.46□□□□□ -0.41
MKS1-207ENST00000578789 CLEC12BQ2HXU8 276 aa12.46□□□□□ -0.41
MKS1-207ENST00000578789 LEG1Q6P5S2 330 aa12.46□□□□□ -0.41
MKS1-207ENST00000578789 TMEM179BQ7Z7N9 219 aa12.46□□□□□ -0.41
MKS1-207ENST00000578789 GLB1L2Q8IW92 636 aa12.46□□□□□ -0.41
MKS1-207ENST00000578789 GIPC3Q8TF64 312 aa12.46□□□□□ -0.41
MKS1-207ENST00000578789 MRPL24Q96A35 216 aaKnown RBP12.46□□□□□ -0.41
MKS1-207ENST00000578789 SLCO4A1Q96BD0 722 aa12.46□□□□□ -0.41
MKS1-207ENST00000578789 C18orf12Q96KH6 178 aa12.46□□□□□ -0.41
MKS1-207ENST00000578789 COX4I2Q96KJ9 171 aa12.46□□□□□ -0.41
MKS1-207ENST00000578789 POM121L2Q96KW2 1035 aa12.46□□□□□ -0.41
MKS1-207ENST00000578789 NMNAT3Q96T66 252 aa12.46□□□□□ -0.41
MKS1-207ENST00000578789 BDH2Q9BUT1 245 aa12.46□□□□□ -0.41
MKS1-207ENST00000578789 WNT5BQ9H1J7 359 aa12.46□□□□□ -0.41
MKS1-207ENST00000578789 EMC7Q9NPA0 242 aa12.46□□□□□ -0.41
MKS1-207ENST00000578789 TBC1D23Q9NUY8 699 aa12.46□□□□□ -0.41
MKS1-207ENST00000578789 COA3Q9Y2R0 106 aaPredicted RBP12.46□□□□□ -0.41
MKS1-207ENST00000578789 CMAHPQ9Y471 501 aa12.46□□□□□ -0.41
MKS1-207ENST00000578789 TIMM10BQ9Y5J6 103 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms