RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 MAB21L2Q9Y586 359 aa3.91□□□□□ -1.78
SDCBP-205ENST00000447267 KCNE2Q9Y6J6 123 aa3.91□□□□□ -1.78
SDCBP-205ENST00000447267 KIAA2026Q5HYC2 2103 aa3.91□□□□□ -1.78
SDCBP-205ENST00000447267 DPPA5A6NC42 116 aa3.9□□□□□ -1.79
SDCBP-205ENST00000447267 ZNF879B4DU55 563 aa3.9□□□□□ -1.79
SDCBP-205ENST00000447267 PLPP1O14494 284 aa3.9□□□□□ -1.79
SDCBP-205ENST00000447267 HIST1H2AGP0C0S8 130 aaPredicted RBP3.9□□□□□ -1.79
SDCBP-205ENST00000447267 KITP10721 976 aa3.9□□□□□ -1.79
SDCBP-205ENST00000447267 PRKACAP17612 351 aa3.9□□□□□ -1.79
SDCBP-205ENST00000447267 HIST1H2ADP20671 130 aa3.9□□□□□ -1.79
SDCBP-205ENST00000447267 CFL1P23528 166 aaKnown RBP3.9□□□□□ -1.79
SDCBP-205ENST00000447267 PIK3R1P27986 724 aa3.9□□□□□ -1.79
SDCBP-205ENST00000447267 EPHA3P29320 983 aa3.9□□□□□ -1.79
SDCBP-205ENST00000447267 SLC7A1P30825 629 aa3.9□□□□□ -1.79
SDCBP-205ENST00000447267 MARCKSL1P49006 195 aa3.9□□□□□ -1.79
SDCBP-205ENST00000447267 VPS41P49754 854 aa3.9□□□□□ -1.79
SDCBP-205ENST00000447267 ZNF41P51814 821 aaPredicted RBP3.9□□□□□ -1.79
SDCBP-205ENST00000447267 DLX1P56177 255 aa3.9□□□□□ -1.79
SDCBP-205ENST00000447267 MRPS15P82914 257 aaKnown RBP3.9□□□□□ -1.79
SDCBP-205ENST00000447267 UBXN1Q04323 297 aa3.9□□□□□ -1.79
SDCBP-205ENST00000447267 SLC3A1Q07837 685 aa3.9□□□□□ -1.79
SDCBP-205ENST00000447267 MOGQ16653 247 aa3.9□□□□□ -1.79
SDCBP-205ENST00000447267 HAGHQ16775 308 aa3.9□□□□□ -1.79
SDCBP-205ENST00000447267 C18orf21Q32NC0 220 aaPredicted RBP3.9□□□□□ -1.79
SDCBP-205ENST00000447267 TMEM155Q4W5P6 130 aa3.9□□□□□ -1.79
SDCBP-205ENST00000447267 TMEM35AQ53FP2 167 aa3.9□□□□□ -1.79
SDCBP-205ENST00000447267 C6orf183Q5T699 404 aa3.9□□□□□ -1.79
SDCBP-205ENST00000447267 OR4C11Q6IEV9 310 aa3.9□□□□□ -1.79
SDCBP-205ENST00000447267 OR52E8Q6IFG1 317 aa3.9□□□□□ -1.79
SDCBP-205ENST00000447267 LRRC8EQ6NSJ5 796 aa3.9□□□□□ -1.79
SDCBP-205ENST00000447267 FAM180BQ6P0A1 224 aa3.9□□□□□ -1.79
SDCBP-205ENST00000447267 CEMP1Q6PRD7 247 aaPredicted RBP3.9□□□□□ -1.79
SDCBP-205ENST00000447267 ZNF813Q6ZN06 617 aa3.9□□□□□ -1.79
SDCBP-205ENST00000447267 KCTD20Q7Z5Y7 419 aa3.9□□□□□ -1.79
SDCBP-205ENST00000447267 GALNT7Q86SF2 657 aa3.9□□□□□ -1.79
SDCBP-205ENST00000447267 SLC51BQ86UW2 128 aa3.9□□□□□ -1.79
SDCBP-205ENST00000447267 MDP1Q86V88 176 aa3.9□□□□□ -1.79
SDCBP-205ENST00000447267 KLBQ86Z14 1044 aa3.9□□□□□ -1.79
SDCBP-205ENST00000447267 KRT78Q8N1N4 520 aa3.9□□□□□ -1.79
SDCBP-205ENST00000447267 RNF175Q8N4F7 328 aa3.9□□□□□ -1.79
SDCBP-205ENST00000447267 NPEPL1Q8NDH3 523 aa3.9□□□□□ -1.79
SDCBP-205ENST00000447267 ZNF524Q96C55 264 aa3.9□□□□□ -1.79
SDCBP-205ENST00000447267 AURKBQ96GD4 344 aaPredicted RBP3.9□□□□□ -1.79
SDCBP-205ENST00000447267 WDFY2Q96P53 400 aa3.9□□□□□ -1.79
SDCBP-205ENST00000447267 OR5B2Q96R09 309 aa3.9□□□□□ -1.79
SDCBP-205ENST00000447267 H2AFJQ9BTM1 129 aa3.9□□□□□ -1.79
SDCBP-205ENST00000447267 CDCA4Q9BXL8 241 aa3.9□□□□□ -1.79
SDCBP-205ENST00000447267 NUF2Q9BZD4 464 aa3.9□□□□□ -1.79
SDCBP-205ENST00000447267 TBL1XR1Q9BZK7 514 aa3.9□□□□□ -1.79
SDCBP-205ENST00000447267 NPFFR1Q9GZQ6 430 aa3.9□□□□□ -1.79
SDCBP-205ENST00000447267 OR51B6Q9H340 312 aa3.9□□□□□ -1.79
SDCBP-205ENST00000447267 C8orf4Q9NR00 106 aa3.9□□□□□ -1.79
SDCBP-205ENST00000447267 SIRT7Q9NRC8 400 aa3.9□□□□□ -1.79
SDCBP-205ENST00000447267 FBXO6Q9NRD1 293 aaPredicted RBP3.9□□□□□ -1.79
SDCBP-205ENST00000447267 PPP1R14DQ9NXH3 145 aa3.9□□□□□ -1.79
SDCBP-205ENST00000447267 MDFICQ9P1T7 246 aa3.9□□□□□ -1.79
SDCBP-205ENST00000447267 CHMP2BQ9UQN3 213 aa3.9□□□□□ -1.79
SDCBP-205ENST00000447267 TMEM5Q9Y2B1 443 aa3.9□□□□□ -1.79
SDCBP-205ENST00000447267 LRP12Q9Y561 859 aa3.9□□□□□ -1.79
SDCBP-205ENST00000447267 ATP6V1DQ9Y5K8 247 aa3.9□□□□□ -1.79
SDCBP-205ENST00000447267 TANC2Q9HCD6 1990 aa3.9□□□□□ -1.79
SDCBP-205ENST00000447267 FAT1Q14517 4588 aa3.9□□□□□ -1.79
SDCBP-205ENST00000447267 DNAH5Q8TE73 4624 aa3.89□□□□□ -1.79
SDCBP-205ENST00000447267 SNTNA6NMZ2 147 aa3.89□□□□□ -1.79
SDCBP-205ENST00000447267 PSMD3O43242 534 aa3.89□□□□□ -1.79
SDCBP-205ENST00000447267 SPRY2O43597 315 aa3.89□□□□□ -1.79
SDCBP-205ENST00000447267 SULT1B1O43704 296 aa3.89□□□□□ -1.79
SDCBP-205ENST00000447267 WDR47O94967 919 aa3.89□□□□□ -1.79
SDCBP-205ENST00000447267 UTS2O95399 124 aa3.89□□□□□ -1.79
SDCBP-205ENST00000447267 H6PDO95479 791 aa3.89□□□□□ -1.79
SDCBP-205ENST00000447267 AGR2O95994 175 aa3.89□□□□□ -1.79
SDCBP-205ENST00000447267 GAS8O95995 478 aa3.89□□□□□ -1.79
SDCBP-205ENST00000447267 NPPAP01160 153 aa3.89□□□□□ -1.79
SDCBP-205ENST00000447267 IGHV1-46P01743 117 aa3.89□□□□□ -1.79
SDCBP-205ENST00000447267 ATP1B1P05026 303 aa3.89□□□□□ -1.79
SDCBP-205ENST00000447267 BCKDHAP12694 445 aa3.89□□□□□ -1.79
SDCBP-205ENST00000447267 ZNF35P13682 527 aa3.89□□□□□ -1.79
SDCBP-205ENST00000447267 RPS2P15880 293 aaKnown RBP3.89□□□□□ -1.79
SDCBP-205ENST00000447267 GNAZP19086 355 aa3.89□□□□□ -1.79
SDCBP-205ENST00000447267 ELK4P28324 431 aa3.89□□□□□ -1.79
SDCBP-205ENST00000447267 GP5P40197 560 aa3.89□□□□□ -1.79
SDCBP-205ENST00000447267 ASIPP42127 132 aa3.89□□□□□ -1.79
SDCBP-205ENST00000447267 ASMTP46597 345 aa3.89□□□□□ -1.79
SDCBP-205ENST00000447267 PRIM2P49643 509 aa3.89□□□□□ -1.79
SDCBP-205ENST00000447267 BMXP51813 675 aa3.89□□□□□ -1.79
SDCBP-205ENST00000447267 ARHGDIBP52566 201 aa3.89□□□□□ -1.79
SDCBP-205ENST00000447267 ERVS71-1P61550 626 aa3.89□□□□□ -1.79
SDCBP-205ENST00000447267 BTG1P62324 171 aa3.89□□□□□ -1.79
SDCBP-205ENST00000447267 ARF6P62330 175 aa3.89□□□□□ -1.79
SDCBP-205ENST00000447267 SLC18A2Q05940 514 aa3.89□□□□□ -1.79
SDCBP-205ENST00000447267 TOMM34Q15785 309 aaPredicted RBP3.89□□□□□ -1.79
SDCBP-205ENST00000447267 Q3ZCU0 254 aa3.89□□□□□ -1.79
SDCBP-205ENST00000447267 RUNDC3AQ59EK9 446 aa3.89□□□□□ -1.79
SDCBP-205ENST00000447267 ODF2Q5BJF6 829 aa3.89□□□□□ -1.79
SDCBP-205ENST00000447267 C9orf66Q5T8R8 295 aa3.89□□□□□ -1.79
SDCBP-205ENST00000447267 PXDC1Q5TGL8 231 aa3.89□□□□□ -1.79
SDCBP-205ENST00000447267 SLC27A4Q6P1M0 643 aa3.89□□□□□ -1.79
SDCBP-205ENST00000447267 LINGO2Q7L985 606 aa3.89□□□□□ -1.79
SDCBP-205ENST00000447267 CENPVQ7Z7K6 275 aaPredicted RBP3.89□□□□□ -1.79
SDCBP-205ENST00000447267 ZER1Q7Z7L7 766 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms