RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 UBBP0CG47 229 aa15.8■□□□□ 0.12
SHANK1-201ENST00000293441 ZNF705DP0CH99 300 aaPredicted RBP15.8■□□□□ 0.12
SHANK1-201ENST00000293441 ZNF705BP0CI00 300 aaPredicted RBP15.8■□□□□ 0.12
SHANK1-201ENST00000293441 RPS27AP62979 156 aaKnown RBP15.8■□□□□ 0.12
SHANK1-201ENST00000293441 UBA52P62987 128 aaKnown RBP15.8■□□□□ 0.12
SHANK1-201ENST00000293441 SMIM15Q7Z3B0 74 aa15.8■□□□□ 0.12
SHANK1-201ENST00000293441 DPPA2Q7Z7J5 298 aa15.8■□□□□ 0.12
SHANK1-201ENST00000293441 TMEM217Q8N7C4 229 aa15.8■□□□□ 0.12
SHANK1-201ENST00000293441 FER1L6Q2WGJ9 1857 aa15.8■□□□□ 0.12
SHANK1-201ENST00000293441 CEACAM5P06731 702 aa15.8■□□□□ 0.12
SHANK1-201ENST00000293441 THBS1P07996 1170 aa15.8■□□□□ 0.12
SHANK1-201ENST00000293441 FAM157BP0CG42 384 aa15.8■□□□□ 0.12
SHANK1-201ENST00000293441 GSK3AP49840 483 aa15.8■□□□□ 0.12
SHANK1-201ENST00000293441 NHSL1Q5SYE7 1610 aa15.8■□□□□ 0.12
SHANK1-201ENST00000293441 SUMF1Q8NBK3 374 aa15.8■□□□□ 0.12
SHANK1-201ENST00000293441 CNTNAP3Q9BZ76 1288 aa15.8■□□□□ 0.12
SHANK1-201ENST00000293441 LAT2Q9GZY6 243 aa15.8■□□□□ 0.12
SHANK1-201ENST00000293441 FBXL2Q9UKC9 423 aa15.8■□□□□ 0.12
SHANK1-201ENST00000293441 COPS3Q9UNS2 423 aa15.8■□□□□ 0.12
SHANK1-201ENST00000293441 GLI3P10071 1580 aa15.8■□□□□ 0.12
SHANK1-201ENST00000293441 TBXA2RP21731 343 aa15.8■□□□□ 0.12
SHANK1-201ENST00000293441 THBS3P49746 956 aa15.8■□□□□ 0.12
SHANK1-201ENST00000293441 EMP3P54852 163 aa15.8■□□□□ 0.12
SHANK1-201ENST00000293441 MC2RQ01718 297 aa15.8■□□□□ 0.12
SHANK1-201ENST00000293441 EBPQ15125 230 aaKnown RBP15.8■□□□□ 0.12
SHANK1-201ENST00000293441 CYP4V2Q6ZWL3 525 aaPredicted RBP15.8■□□□□ 0.12
SHANK1-201ENST00000293441 DOK3Q7L591 496 aa15.8■□□□□ 0.12
SHANK1-201ENST00000293441 TMEM102Q8N9M5 508 aaPredicted RBP15.8■□□□□ 0.12
SHANK1-201ENST00000293441 SSUH2Q9Y2M2 353 aa15.8■□□□□ 0.12
SHANK1-201ENST00000293441 POM121CA8CG34 1229 aa15.8■□□□□ 0.12
SHANK1-201ENST00000293441 OR8U8P0C7N1 319 aa15.8■□□□□ 0.12
SHANK1-201ENST00000293441 TAS2R4Q9NYW5 299 aa15.8■□□□□ 0.12
SHANK1-201ENST00000293441 SNRNP70P08621 437 aaKnown RBP15.8■□□□□ 0.12
SHANK1-201ENST00000293441 SERPINF1P36955 418 aa15.8■□□□□ 0.12
SHANK1-201ENST00000293441 XKR7Q5GH72 579 aa15.8■□□□□ 0.12
SHANK1-201ENST00000293441 PTRH1Q86Y79 214 aaKnown RBP15.8■□□□□ 0.12
SHANK1-201ENST00000293441 OR10J5Q8NHC4 309 aa15.8■□□□□ 0.12
SHANK1-201ENST00000293441 OR51E1Q8TCB6 317 aa15.8■□□□□ 0.12
SHANK1-201ENST00000293441 NDRG3Q9UGV2 375 aa15.8■□□□□ 0.12
SHANK1-201ENST00000293441 HBG1P69891 147 aa15.79■□□□□ 0.12
SHANK1-201ENST00000293441 HBG2P69892 147 aa15.79■□□□□ 0.12
SHANK1-201ENST00000293441 SELENBP1Q13228 472 aa15.79■□□□□ 0.12
SHANK1-201ENST00000293441 DEFB108BQ8NET1 73 aa15.79■□□□□ 0.12
SHANK1-201ENST00000293441 OR56B4Q8NH76 319 aa15.79■□□□□ 0.12
SHANK1-201ENST00000293441 MZB1Q8WU39 189 aa15.79■□□□□ 0.12
SHANK1-201ENST00000293441 UBE2FQ969M7 185 aa15.79■□□□□ 0.12
SHANK1-201ENST00000293441 KCNJ15Q99712 375 aa15.79■□□□□ 0.12
SHANK1-201ENST00000293441 ACOXLQ9NUZ1 547 aa15.79■□□□□ 0.12
SHANK1-201ENST00000293441 TIMM10BQ9Y5J6 103 aa15.79■□□□□ 0.12
SHANK1-201ENST00000293441 CT45A6P0DMU7 189 aa15.79■□□□□ 0.12
SHANK1-201ENST00000293441 CT45A5P0DMU8 189 aa15.79■□□□□ 0.12
SHANK1-201ENST00000293441 CT45A7P0DMV0 189 aa15.79■□□□□ 0.12
SHANK1-201ENST00000293441 CT45A8P0DMV1 189 aa15.79■□□□□ 0.12
SHANK1-201ENST00000293441 CT45A9P0DMV2 189 aa15.79■□□□□ 0.12
SHANK1-201ENST00000293441 GABRG2P18507 467 aa15.79■□□□□ 0.12
SHANK1-201ENST00000293441 ARR3P36575 388 aa15.79■□□□□ 0.12
SHANK1-201ENST00000293441 PPICP45877 212 aa15.79■□□□□ 0.12
SHANK1-201ENST00000293441 CT45A2Q5DJT8 189 aa15.79■□□□□ 0.12
SHANK1-201ENST00000293441 CT45A1Q5HYN5 189 aa15.79■□□□□ 0.12
SHANK1-201ENST00000293441 CT45A3Q8NHU0 189 aa15.79■□□□□ 0.12
SHANK1-201ENST00000293441 ISL2Q96A47 359 aa15.79■□□□□ 0.12
SHANK1-201ENST00000293441 SHARPINQ9H0F6 387 aa15.79■□□□□ 0.12
SHANK1-201ENST00000293441 SLC22A11Q9NSA0 550 aa15.79■□□□□ 0.12
SHANK1-201ENST00000293441 PTTG3PQ9NZH4 202 aa15.79■□□□□ 0.12
SHANK1-201ENST00000293441 SULT1C2O00338 296 aa15.79■□□□□ 0.12
SHANK1-201ENST00000293441 SOD1P00441 154 aa15.79■□□□□ 0.12
SHANK1-201ENST00000293441 HIST1H1CP16403 213 aaKnown RBP15.79■□□□□ 0.12
SHANK1-201ENST00000293441 PIGAP37287 484 aa15.79■□□□□ 0.12
SHANK1-201ENST00000293441 ZMAT1Q5H9K5 638 aa15.79■□□□□ 0.12
SHANK1-201ENST00000293441 OR10K1Q8NGX5 313 aa15.79■□□□□ 0.12
SHANK1-201ENST00000293441 KCNE4Q8WWG9 221 aa15.79■□□□□ 0.12
SHANK1-201ENST00000293441 CXCL13O43927 109 aa15.79■□□□□ 0.12
SHANK1-201ENST00000293441 CLDN15P56746 228 aa15.79■□□□□ 0.12
SHANK1-201ENST00000293441 IHHQ14623 411 aa15.79■□□□□ 0.12
SHANK1-201ENST00000293441 LRRC61Q9BV99 259 aa15.79■□□□□ 0.12
SHANK1-201ENST00000293441 SCN7AQ01118 1682 aa15.79■□□□□ 0.12
SHANK1-201ENST00000293441 KLK10O43240 276 aa15.79■□□□□ 0.12
SHANK1-201ENST00000293441 FADS1O60427 444 aa15.79■□□□□ 0.12
SHANK1-201ENST00000293441 SLC6A12P48065 614 aa15.79■□□□□ 0.12
SHANK1-201ENST00000293441 DHRS4L2Q6PKH6 230 aa15.79■□□□□ 0.12
SHANK1-201ENST00000293441 TCTEX1D2Q8WW35 142 aa15.79■□□□□ 0.12
SHANK1-201ENST00000293441 SLAMF6Q96DU3 332 aa15.79■□□□□ 0.12
SHANK1-201ENST00000293441 UHRF2Q96PU4 802 aa15.79■□□□□ 0.12
SHANK1-201ENST00000293441 ZNF436Q9C0F3 470 aaPredicted RBP15.79■□□□□ 0.12
SHANK1-201ENST00000293441 HEYLQ9NQ87 328 aaPredicted RBP15.79■□□□□ 0.12
SHANK1-201ENST00000293441 HRO43593 1189 aa15.79■□□□□ 0.12
SHANK1-201ENST00000293441 SULT1B1O43704 296 aa15.79■□□□□ 0.12
SHANK1-201ENST00000293441 SLC2A10O95528 541 aa15.79■□□□□ 0.12
SHANK1-201ENST00000293441 SPEM2Q0P670 501 aa15.79■□□□□ 0.12
SHANK1-201ENST00000293441 DUSP8Q13202 625 aa15.79■□□□□ 0.12
SHANK1-201ENST00000293441 FAM185AQ8N0U4 392 aa15.79■□□□□ 0.12
SHANK1-201ENST00000293441 ASH2LQ9UBL3 628 aa15.79■□□□□ 0.12
SHANK1-201ENST00000293441 AKAP11Q9UKA4 1901 aa15.78■□□□□ 0.12
SHANK1-201ENST00000293441 FIGNL2A6NMB9 653 aa15.78■□□□□ 0.12
SHANK1-201ENST00000293441 METTL12A8MUP2 240 aa15.78■□□□□ 0.12
SHANK1-201ENST00000293441 CHRNB1P11230 501 aa15.78■□□□□ 0.12
SHANK1-201ENST00000293441 AADACP22760 399 aa15.78■□□□□ 0.12
SHANK1-201ENST00000293441 NPY4RP50391 375 aa15.78■□□□□ 0.12
SHANK1-201ENST00000293441 EMDP50402 254 aa15.78■□□□□ 0.12
SHANK1-201ENST00000293441 GALEQ14376 348 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms