RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 PSMB3P49720 205 aa12.14□□□□□ -0.47
COL1A1-201ENST00000225964 BAGE3Q86Y29 109 aa12.14□□□□□ -0.47
COL1A1-201ENST00000225964 BAGE2Q86Y30 109 aa12.14□□□□□ -0.47
COL1A1-201ENST00000225964 NKAIN3Q8N8D7 197 aa12.14□□□□□ -0.47
COL1A1-201ENST00000225964 PINX1Q96BK5 328 aaKnown RBP12.14□□□□□ -0.47
COL1A1-201ENST00000225964 ZNF583Q96ND8 569 aa12.14□□□□□ -0.47
COL1A1-201ENST00000225964 TXLNGYQ9BZA5 131 aa12.14□□□□□ -0.47
COL1A1-201ENST00000225964 AMBRA1Q9C0C7 1298 aa12.14□□□□□ -0.47
COL1A1-201ENST00000225964 KCNIP2Q9NS61 270 aa12.14□□□□□ -0.47
COL1A1-201ENST00000225964 ARHGAP33O14559 1287 aa12.14□□□□□ -0.47
COL1A1-201ENST00000225964 EIF4E2O60573 245 aaKnown RBP12.14□□□□□ -0.47
COL1A1-201ENST00000225964 ECI1P42126 302 aa12.14□□□□□ -0.47
COL1A1-201ENST00000225964 LACC1Q8IV20 430 aa12.14□□□□□ -0.47
COL1A1-201ENST00000225964 SLC25A43Q8WUT9 341 aaPredicted RBP12.14□□□□□ -0.47
COL1A1-201ENST00000225964 FAM3DQ96BQ1 224 aa12.14□□□□□ -0.47
COL1A1-201ENST00000225964 TUBB1Q9H4B7 451 aa12.14□□□□□ -0.47
COL1A1-201ENST00000225964 NDRG4Q9ULP0 352 aaKnown RBP12.14□□□□□ -0.47
COL1A1-201ENST00000225964 NTNG1Q9Y2I2 539 aa12.14□□□□□ -0.47
COL1A1-201ENST00000225964 GPR55Q9Y2T6 319 aaPredicted RBP12.14□□□□□ -0.47
COL1A1-201ENST00000225964 A0A1W2PNR3 127 aa12.14□□□□□ -0.47
COL1A1-201ENST00000225964 STMND1H3BQB6 276 aa12.14□□□□□ -0.47
COL1A1-201ENST00000225964 SLC31A2O15432 143 aa12.14□□□□□ -0.47
COL1A1-201ENST00000225964 LGI1O95970 557 aa12.14□□□□□ -0.47
COL1A1-201ENST00000225964 CD14P08571 375 aa12.14□□□□□ -0.47
COL1A1-201ENST00000225964 PPT1P50897 306 aa12.14□□□□□ -0.47
COL1A1-201ENST00000225964 PLK5Q496M5 336 aa12.14□□□□□ -0.47
COL1A1-201ENST00000225964 PYCR3Q53H96 274 aa12.14□□□□□ -0.47
COL1A1-201ENST00000225964 SLC35D3Q5M8T2 416 aa12.14□□□□□ -0.47
COL1A1-201ENST00000225964 STEAP1BQ6NZ63 245 aa12.14□□□□□ -0.47
COL1A1-201ENST00000225964 MDGA2Q7Z553 956 aa12.14□□□□□ -0.47
COL1A1-201ENST00000225964 THNSL2Q86YJ6 484 aa12.14□□□□□ -0.47
COL1A1-201ENST00000225964 SARAFQ96BY9 339 aa12.14□□□□□ -0.47
COL1A1-201ENST00000225964 OR52A5Q9H2C5 316 aa12.14□□□□□ -0.47
COL1A1-201ENST00000225964 TSTD3H0UI37 97 aa12.13□□□□□ -0.47
COL1A1-201ENST00000225964 NUPL2O15504 423 aaKnown RBP12.13□□□□□ -0.47
COL1A1-201ENST00000225964 ABLIM3O94929 683 aa12.13□□□□□ -0.47
COL1A1-201ENST00000225964 RPS16P62249 146 aaKnown RBP12.13□□□□□ -0.47
COL1A1-201ENST00000225964 UBE2G1P62253 170 aa12.13□□□□□ -0.47
COL1A1-201ENST00000225964 TBCEQ15813 527 aaPredicted RBP12.13□□□□□ -0.47
COL1A1-201ENST00000225964 TATDN3Q17R31 274 aa12.13□□□□□ -0.47
COL1A1-201ENST00000225964 IP6K3Q96PC2 410 aa12.13□□□□□ -0.47
COL1A1-201ENST00000225964 CHRNA9Q9UGM1 479 aa12.13□□□□□ -0.47
COL1A1-201ENST00000225964 ETV7Q9Y603 341 aa12.13□□□□□ -0.47
COL1A1-201ENST00000225964 FIGNL2A6NMB9 653 aa12.13□□□□□ -0.47
COL1A1-201ENST00000225964 PAPLNO95428 1278 aa12.13□□□□□ -0.47
COL1A1-201ENST00000225964 METRNLQ641Q3 311 aa12.13□□□□□ -0.47
COL1A1-201ENST00000225964 DOK3Q7L591 496 aa12.13□□□□□ -0.47
COL1A1-201ENST00000225964 SKA3Q8IX90 412 aa12.13□□□□□ -0.47
COL1A1-201ENST00000225964 OR10K1Q8NGX5 313 aa12.13□□□□□ -0.47
COL1A1-201ENST00000225964 FBXW5Q969U6 566 aa12.13□□□□□ -0.47
COL1A1-201ENST00000225964 MRPS24Q96EL2 167 aaKnown RBP12.13□□□□□ -0.47
COL1A1-201ENST00000225964 MBOAT4Q96T53 435 aa12.13□□□□□ -0.47
COL1A1-201ENST00000225964 CXCL16Q9H2A7 254 aa12.13□□□□□ -0.47
COL1A1-201ENST00000225964 CLEC1BQ9P126 229 aa12.13□□□□□ -0.47
COL1A1-201ENST00000225964 LINC01565O15544 149 aa12.13□□□□□ -0.47
COL1A1-201ENST00000225964 HNF1AP20823 631 aa12.13□□□□□ -0.47
COL1A1-201ENST00000225964 SNTB1Q13884 538 aaKnown RBP12.13□□□□□ -0.47
COL1A1-201ENST00000225964 LAX1Q8IWV1 398 aa12.13□□□□□ -0.47
COL1A1-201ENST00000225964 ROBO4Q8WZ75 1007 aa12.13□□□□□ -0.47
COL1A1-201ENST00000225964 BARX1Q9HBU1 254 aaPredicted RBP12.13□□□□□ -0.47
COL1A1-201ENST00000225964 EXOSC3Q9NQT5 275 aaKnown RBP12.13□□□□□ -0.47
COL1A1-201ENST00000225964 TMEM202A6NGA9 273 aa12.13□□□□□ -0.47
COL1A1-201ENST00000225964 M0R082 166 aa12.13□□□□□ -0.47
COL1A1-201ENST00000225964 KLKB1P03952 638 aa12.13□□□□□ -0.47
COL1A1-201ENST00000225964 SLC30A7Q8NEW0 376 aa12.13□□□□□ -0.47
COL1A1-201ENST00000225964 CORO2AQ92828 525 aa12.13□□□□□ -0.47
COL1A1-201ENST00000225964 CHST8Q9H2A9 424 aa12.13□□□□□ -0.47
COL1A1-201ENST00000225964 TAS2R4Q9NYW5 299 aa12.13□□□□□ -0.47
COL1A1-201ENST00000225964 TIMM10BQ9Y5J6 103 aa12.13□□□□□ -0.47
COL1A1-201ENST00000225964 COL16A1Q07092 1604 aaPredicted RBP12.13□□□□□ -0.47
COL1A1-201ENST00000225964 SRMP19623 302 aa12.13□□□□□ -0.47
COL1A1-201ENST00000225964 TBXA2RP21731 343 aa12.13□□□□□ -0.47
COL1A1-201ENST00000225964 HENMT1Q5T8I9 393 aaKnown RBP12.13□□□□□ -0.47
COL1A1-201ENST00000225964 CCDC71Q8IV32 467 aaPredicted RBP12.13□□□□□ -0.47
COL1A1-201ENST00000225964 OR51A4Q8NGJ6 313 aa12.13□□□□□ -0.47
COL1A1-201ENST00000225964 SMAP2Q8WU79 429 aaPredicted RBP12.13□□□□□ -0.47
COL1A1-201ENST00000225964 KCNE4Q8WWG9 221 aa12.13□□□□□ -0.47
COL1A1-201ENST00000225964 FGF22Q9HCT0 170 aa12.13□□□□□ -0.47
COL1A1-201ENST00000225964 ANKRD36CQ5JPF3 1778 aa12.13□□□□□ -0.47
COL1A1-201ENST00000225964 SEC14L6B5MCN3 397 aa12.12□□□□□ -0.47
COL1A1-201ENST00000225964 BHLHE40O14503 412 aa12.12□□□□□ -0.47
COL1A1-201ENST00000225964 SOD1P00441 154 aa12.12□□□□□ -0.47
COL1A1-201ENST00000225964 SRFP11831 508 aa12.12□□□□□ -0.47
COL1A1-201ENST00000225964 PCSK6P29122 969 aa12.12□□□□□ -0.47
COL1A1-201ENST00000225964 LHFPL2Q6ZUX7 228 aa12.12□□□□□ -0.47
COL1A1-201ENST00000225964 UBALD2Q8IYN6 164 aa12.12□□□□□ -0.47
COL1A1-201ENST00000225964 REEP6Q96HR9 211 aa12.12□□□□□ -0.47
COL1A1-201ENST00000225964 ONECUT1Q9UBC0 465 aa12.12□□□□□ -0.47
COL1A1-201ENST00000225964 A3GALT2U3KPV4 340 aa12.12□□□□□ -0.47
COL1A1-201ENST00000225964 ZFP92A6NM28 416 aa12.12□□□□□ -0.47
COL1A1-201ENST00000225964 TNFRSF10CO14798 259 aa12.12□□□□□ -0.47
COL1A1-201ENST00000225964 HOXC11O43248 304 aaPredicted RBP12.12□□□□□ -0.47
COL1A1-201ENST00000225964 ICOSLGO75144 302 aa12.12□□□□□ -0.47
COL1A1-201ENST00000225964 TRIM23P36406 574 aa12.12□□□□□ -0.47
COL1A1-201ENST00000225964 MTNR1BP49286 362 aa12.12□□□□□ -0.47
COL1A1-201ENST00000225964 DUSP5Q16690 384 aa12.12□□□□□ -0.47
COL1A1-201ENST00000225964 ALKAL2Q6UX46 152 aa12.12□□□□□ -0.47
COL1A1-201ENST00000225964 L3MBTL4Q8NA19 623 aa12.12□□□□□ -0.47
COL1A1-201ENST00000225964 OR51F2Q8NH61 342 aa12.12□□□□□ -0.47
COL1A1-201ENST00000225964 C2CD4DB7Z1M9 353 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms