RNA–Protein interactions for RNA: YPL193W

RSA1, Transcript of Protein involved in the assembly of 60S ribosomal subunits, yeast

Gene RSA1, Length 1,146 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA1	YPL193W	ATG11	Q12527	1178 aa		4.46	□□□□□ -1.7
RSA1	YPL193W	ECM5	Q03214	1411 aa		4.46	□□□□□ -1.7
RSA1	YPL193W	TOM70	P07213	617 aa	Known RBP	4.45	□□□□□ -1.7
RSA1	YPL193W	ORC2	P32833	620 aa		4.45	□□□□□ -1.7
RSA1	YPL193W	BAP3	P41815	604 aa		4.45	□□□□□ -1.7
RSA1	YPL193W	PAN2	P53010	1115 aa	Predicted RBP	4.45	□□□□□ -1.7
RSA1	YPL193W	NAN1	Q02931	896 aa	Known RBP	4.45	□□□□□ -1.7
RSA1	YPL193W	YDR514C	Q04408	483 aa		4.45	□□□□□ -1.7
RSA1	YPL193W	YKL033W-A	Q86ZR7	236 aa		4.45	□□□□□ -1.7
RSA1	YPL193W	MVD1	P32377	396 aa	Known RBP	4.44	□□□□□ -1.7
RSA1	YPL193W	GLG1	P36143	616 aa		4.44	□□□□□ -1.7
RSA1	YPL193W	CTR1	P49573	406 aa		4.44	□□□□□ -1.7
RSA1	YPL193W	MTL1	P53214	551 aa		4.44	□□□□□ -1.7
RSA1	YPL193W	HSP60	P19882	572 aa	Known RBP	4.43	□□□□□ -1.7
RSA1	YPL193W	CCT3	P39077	534 aa	Known RBP	4.43	□□□□□ -1.7
RSA1	YPL193W	ZIP2	P53061	704 aa		4.43	□□□□□ -1.7
RSA1	YPL193W	REH1	Q06709	432 aa		4.43	□□□□□ -1.7
RSA1	YPL193W	YDL124W	Q07551	312 aa	Known RBP	4.43	□□□□□ -1.7
RSA1	YPL193W	SSF2	Q12153	453 aa	Predicted RBP	4.43	□□□□□ -1.7
RSA1	YPL193W	YBR182C-A	Q8TGU6	64 aa		4.43	□□□□□ -1.7
RSA1	YPL193W	RPN13	O13563	156 aa		4.42	□□□□□ -1.7
RSA1	YPL193W	DIF1	O13577	133 aa		4.42	□□□□□ -1.7
RSA1	YPL193W	PYC1	P11154	1178 aa	Known RBP	4.42	□□□□□ -1.7
RSA1	YPL193W	RAD4	P14736	754 aa		4.42	□□□□□ -1.7
RSA1	YPL193W	SGS1	P35187	1447 aa		4.42	□□□□□ -1.7
RSA1	YPL193W	UBS1	P38290	277 aa		4.42	□□□□□ -1.7
RSA1	YPL193W	FMO1	P38866	432 aa		4.42	□□□□□ -1.7
RSA1	YPL193W	ARG2	P40360	574 aa		4.42	□□□□□ -1.7
RSA1	YPL193W	PRP31	P49704	494 aa	Predicted RBP	4.42	□□□□□ -1.7
RSA1	YPL193W	UBC9	P50623	157 aa	Predicted RBP	4.42	□□□□□ -1.7
RSA1	YPL193W	YBP2	P53169	641 aa		4.42	□□□□□ -1.7
RSA1	YPL193W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.41	□□□□□ -1.7	not detected
RSA1	YPL193W	SIR3	P06701	978 aa		4.41	□□□□□ -1.7
RSA1	YPL193W	HOM2	P13663	365 aa	Known RBP	4.41	□□□□□ -1.7
RSA1	YPL193W	PER1	P25625	357 aa		4.41	□□□□□ -1.7
RSA1	YPL193W	BDH2	P39713	417 aa		4.41	□□□□□ -1.7
RSA1	YPL193W	RLP7	P40693	322 aa	Known RBP	4.41	□□□□□ -1.7
RSA1	YPL193W	YGR125W	P53273	1036 aa		4.41	□□□□□ -1.7
RSA1	YPL193W	MET7	Q08645	548 aa		4.41	□□□□□ -1.7
RSA1	YPL193W	CIT1	P00890	479 aa		4.4	□□□□□ -1.71
RSA1	YPL193W	SPC29	P33419	253 aa		4.4	□□□□□ -1.71
RSA1	YPL193W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.4	□□□□□ -1.71	not detected
RSA1	YPL193W	ZDS1	P50111	915 aa	Known RBP	4.4	□□□□□ -1.71
RSA1	YPL193W	RIM13	Q03792	727 aa		4.4	□□□□□ -1.71
RSA1	YPL193W	CTK1	Q03957	528 aa	Known RBP	4.4	□□□□□ -1.71
RSA1	YPL193W	PHO11	P35842	467 aa		4.39	□□□□□ -1.71
RSA1	YPL193W	PHO12	P38693	467 aa		4.39	□□□□□ -1.71
RSA1	YPL193W	LYS9	P38999	446 aa		4.39	□□□□□ -1.71
RSA1	YPL193W	HUL4	P40985	892 aa		4.39	□□□□□ -1.71
RSA1	YPL193W	ALG2	P43636	503 aa		4.39	□□□□□ -1.71
RSA1	YPL193W	TIM54	P47045	478 aa		4.39	□□□□□ -1.71
RSA1	YPL193W	RGC1	Q06108	1083 aa	Known RBP	4.39	□□□□□ -1.71
RSA1	YPL193W	THO2	P53552	1597 aa	Known RBP	4.39	□□□□□ -1.71
RSA1	YPL193W	CCR4	P31384	837 aa	Known RBP	4.38	□□□□□ -1.71
RSA1	YPL193W	YHR112C	P38716	378 aa		4.38	□□□□□ -1.71
RSA1	YPL193W	NUP60	P39705	539 aa		4.38	□□□□□ -1.71
RSA1	YPL193W	GAT1	P43574	510 aa		4.38	□□□□□ -1.71
RSA1	YPL193W	TAF8	Q03750	510 aa		4.38	□□□□□ -1.71
RSA1	YPL193W	BUD4	P47136	1447 aa		4.38	□□□□□ -1.71
RSA1	YPL193W	ADE2	P21264	571 aa	Known RBP	4.37	□□□□□ -1.71
RSA1	YPL193W	VPS34	P22543	875 aa		4.37	□□□□□ -1.71
RSA1	YPL193W	BET3	P36149	193 aa		4.37	□□□□□ -1.71
RSA1	YPL193W	ECM1	P39715	212 aa		4.37	□□□□□ -1.71
RSA1	YPL193W	ALY2	P47029	1046 aa		4.37	□□□□□ -1.71
RSA1	YPL193W	HXT16	P47185	567 aa		4.37	□□□□□ -1.71
RSA1	YPL193W	ATG4	P53867	494 aa		4.37	□□□□□ -1.71
RSA1	YPL193W	MLH3	Q12083	715 aa		4.37	□□□□□ -1.71
RSA1	YPL193W	MDS3	P53094	1487 aa		4.37	□□□□□ -1.71
RSA1	YPL193W	HIR3	P47171	1648 aa		4.36	□□□□□ -1.71
RSA1	YPL193W	ERG6	P25087	383 aa	Known RBP	4.36	□□□□□ -1.71
RSA1	YPL193W	FHN1	P53279	174 aa		4.36	□□□□□ -1.71
RSA1	YPL193W	OSW1	Q08692	278 aa		4.36	□□□□□ -1.71
RSA1	YPL193W	USV1	Q12132	391 aa		4.36	□□□□□ -1.71
RSA1	YPL193W	ERG11	P10614	530 aa		4.35	□□□□□ -1.71
RSA1	YPL193W	PAC2	P39937	518 aa		4.35	□□□□□ -1.71
RSA1	YPL193W	ATP25	Q03153	612 aa		4.35	□□□□□ -1.71
RSA1	YPL193W	REV3	P14284	1504 aa		4.35	□□□□□ -1.71
RSA1	YPL193W	TRZ1	P36159	838 aa	Predicted RBP	4.34	□□□□□ -1.71
RSA1	YPL193W	SNU71	P53207	620 aa	Known RBP	4.34	□□□□□ -1.71
RSA1	YPL193W	SEG1	Q04279	960 aa		4.34	□□□□□ -1.71
RSA1	YPL193W	YDR338C	Q05497	695 aa		4.34	□□□□□ -1.71
RSA1	YPL193W	ZRT2	Q12436	422 aa		4.34	□□□□□ -1.71
RSA1	YPL193W	HRP1	Q99383	534 aa	Known RBP	4.34	□□□□□ -1.71
RSA1	YPL193W	RPA135	P22138	1203 aa	Known RBP	4.33	□□□□□ -1.72
RSA1	YPL193W	PTP1	P25044	335 aa		4.33	□□□□□ -1.72
RSA1	YPL193W	ORC4	P54791	529 aa		4.33	□□□□□ -1.72
RSA1	YPL193W	THR1	P17423	357 aa	Known RBP	4.32	□□□□□ -1.72
RSA1	YPL193W	APL2	P36000	726 aa	Predicted RBP	4.32	□□□□□ -1.72
RSA1	YPL193W	APT2	P36973	181 aa		4.32	□□□□□ -1.72
RSA1	YPL193W	MUP3	P38734	546 aa		4.32	□□□□□ -1.72
RSA1	YPL193W	TY4A-J	P47023	414 aa		4.32	□□□□□ -1.72
RSA1	YPL193W	SCS3	P53012	380 aa		4.32	□□□□□ -1.72
RSA1	YPL193W	RTA1	P53047	317 aa		4.32	□□□□□ -1.72
RSA1	YPL193W	ARG5,6	Q01217	863 aa		4.32	□□□□□ -1.72
RSA1	YPL193W	SLK19	Q08581	821 aa	Known RBP	4.32	□□□□□ -1.72
RSA1	YPL193W	FLC1	Q08967	793 aa		4.32	□□□□□ -1.72
RSA1	YPL193W	PEP1	P32319	1579 aa		4.31	□□□□□ -1.72
RSA1	YPL193W	NUP1	P20676	1076 aa		4.31	□□□□□ -1.72
RSA1	YPL193W	FUB1	P25659	250 aa		4.31	□□□□□ -1.72
RSA1	YPL193W	SET3	P36124	751 aa		4.31	□□□□□ -1.72

Retrieved 100 of 5,963 RNA–protein pairs in 48.2 ms