RNA–Protein interactions for RNA: YPL019C

VTC3, Transcript of Subunit of vacuolar transporter chaperone (VTC) complex, yeast

Gene VTC3, Length 2,508 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTC3	YPL019C	HCR1	Q05775	265 aa	Known RBP	2.73	□□□□□ -1.97
VTC3	YPL019C	NKP2	Q06162	153 aa		2.73	□□□□□ -1.97
VTC3	YPL019C	CRD1	Q07560	283 aa		2.73	□□□□□ -1.97
VTC3	YPL019C	WHI4	Q07655	649 aa	Known RBP	2.73	□□□□□ -1.97
VTC3	YPL019C	HIF1	Q12373	385 aa		2.73	□□□□□ -1.97
VTC3	YPL019C	YOR111W	Q99210	232 aa		2.73	□□□□□ -1.97
VTC3	YPL019C	PGK1	P00560	416 aa	Known RBP	2.72	□□□□□ -1.97
VTC3	YPL019C	FUS1	P11710	512 aa		2.72	□□□□□ -1.97
VTC3	YPL019C	MSH3	P25336	1018 aa		2.72	□□□□□ -1.97
VTC3	YPL019C	AAP1	P37898	856 aa	Known RBP	2.72	□□□□□ -1.97
VTC3	YPL019C	CCT3	P39077	534 aa	Known RBP	2.72	□□□□□ -1.97
VTC3	YPL019C	PRK1	P40494	810 aa		2.72	□□□□□ -1.97
VTC3	YPL019C	YFL052W	P43551	465 aa		2.72	□□□□□ -1.97
VTC3	YPL019C	YJL045W	P47052	634 aa		2.72	□□□□□ -1.97
VTC3	YPL019C	YJR124C	P47159	448 aa		2.72	□□□□□ -1.97
VTC3	YPL019C	IRC10	Q08118	586 aa		2.72	□□□□□ -1.97
VTC3	YPL019C	RTT10	Q08924	1013 aa		2.72	□□□□□ -1.97
VTC3	YPL019C	HFI1	Q12060	488 aa		2.72	□□□□□ -1.97
VTC3	YPL019C	YLR422W	Q06409	1932 aa		2.72	□□□□□ -1.97
VTC3	YPL019C	CCH1	P50077	2039 aa		2.72	□□□□□ -1.97
VTC3	YPL019C	SRO9	P25567	434 aa	Known RBP	2.72	□□□□□ -1.97
VTC3	YPL019C	ADK2	P26364	225 aa		2.72	□□□□□ -1.97
VTC3	YPL019C	PEP3	P27801	918 aa		2.72	□□□□□ -1.97
VTC3	YPL019C	EFT1	P32324	842 aa	Known RBP	2.72	□□□□□ -1.97
VTC3	YPL019C	GLY1	P37303	387 aa	Known RBP	2.72	□□□□□ -1.97
VTC3	YPL019C	BRN1	P38170	754 aa		2.72	□□□□□ -1.97
VTC3	YPL019C	YHL026C	P38740	315 aa		2.72	□□□□□ -1.97
VTC3	YPL019C	MOB1	P40484	314 aa		2.72	□□□□□ -1.97
VTC3	YPL019C	CIT3	P43635	486 aa		2.72	□□□□□ -1.97
VTC3	YPL019C	CWC24	P53769	259 aa		2.72	□□□□□ -1.97
VTC3	YPL019C	CUZ1	P53899	274 aa		2.72	□□□□□ -1.97
VTC3	YPL019C	ORC4	P54791	529 aa		2.72	□□□□□ -1.97
VTC3	YPL019C	YDR341C	Q05506	607 aa	Known RBP	2.72	□□□□□ -1.97
VTC3	YPL019C	PMT7	Q06644	662 aa		2.72	□□□□□ -1.97
VTC3	YPL019C	PCD1	Q12524	340 aa		2.72	□□□□□ -1.97
VTC3	YPL019C	WHI2	P12611	486 aa		2.71	□□□□□ -1.98
VTC3	YPL019C	BET2	P20133	325 aa		2.71	□□□□□ -1.98
VTC3	YPL019C	CDC48	P25694	835 aa	Known RBP	2.71	□□□□□ -1.98
VTC3	YPL019C	SEC21	P32074	935 aa	Known RBP	2.71	□□□□□ -1.98
VTC3	YPL019C	YKL091C	P33324	310 aa	Known RBP	2.71	□□□□□ -1.98
VTC3	YPL019C	PGM1	P33401	570 aa	Known RBP	2.71	□□□□□ -1.98
VTC3	YPL019C	SAS3	P34218	831 aa		2.71	□□□□□ -1.98
VTC3	YPL019C	UBP11	P36026	717 aa		2.71	□□□□□ -1.98
VTC3	YPL019C	NCL1	P38205	684 aa	Known RBP	2.71	□□□□□ -1.98
VTC3	YPL019C	RFS1	P38234	210 aa	Known RBP	2.71	□□□□□ -1.98
VTC3	YPL019C	YAP1801	P38856	637 aa		2.71	□□□□□ -1.98
VTC3	YPL019C	SAD1	P43589	448 aa		2.71	□□□□□ -1.98
VTC3	YPL019C	JJJ3	P47138	172 aa		2.71	□□□□□ -1.98
VTC3	YPL019C	ALG12	P53730	551 aa		2.71	□□□□□ -1.98
VTC3	YPL019C	UBP2	Q01476	1272 aa		2.71	□□□□□ -1.98
VTC3	YPL019C	TY1A-DR2	Q03964	440 aa	Known RBP	2.71	□□□□□ -1.98
VTC3	YPL019C	TY1A-MR1	Q04215	440 aa		2.71	□□□□□ -1.98
VTC3	YPL019C	MRL1	Q06815	381 aa		2.71	□□□□□ -1.98
VTC3	YPL019C	SMC5	Q08204	1093 aa		2.71	□□□□□ -1.98
VTC3	YPL019C	RAD50	P12753	1312 aa		2.71	□□□□□ -1.98
VTC3	YPL019C	SNF1	P06782	633 aa	Known RBP	2.71	□□□□□ -1.98
VTC3	YPL019C	STI1	P15705	589 aa	Known RBP RIP-Chip data	2.71	□□□□□ -1.98	not detected
VTC3	YPL019C	DIT1	P21623	536 aa		2.71	□□□□□ -1.98
VTC3	YPL019C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	2.71	□□□□□ -1.98	not detected
VTC3	YPL019C	YHR202W	P38887	602 aa		2.71	□□□□□ -1.98
VTC3	YPL019C	CCC2	P38995	1004 aa		2.71	□□□□□ -1.98
VTC3	YPL019C	LSB6	P42951	607 aa		2.71	□□□□□ -1.98
VTC3	YPL019C	PFD1	P46988	109 aa		2.71	□□□□□ -1.98
VTC3	YPL019C	TYW3	P53177	273 aa		2.71	□□□□□ -1.98
VTC3	YPL019C	BNI5	P53890	448 aa	Known RBP	2.71	□□□□□ -1.98
VTC3	YPL019C	KRE33	P53914	1056 aa	Known RBP	2.71	□□□□□ -1.98
VTC3	YPL019C	FAR11	P53917	953 aa		2.71	□□□□□ -1.98
VTC3	YPL019C	PEX13	P80667	386 aa		2.71	□□□□□ -1.98
VTC3	YPL019C	ROD1	Q02805	837 aa		2.71	□□□□□ -1.98
VTC3	YPL019C	CSM3	Q04659	317 aa		2.71	□□□□□ -1.98
VTC3	YPL019C	YLR257W	Q06146	321 aa	Known RBP	2.71	□□□□□ -1.98
VTC3	YPL019C	YPL066W	Q12194	479 aa		2.71	□□□□□ -1.98
VTC3	YPL019C	NUM1	Q00402	2748 aa		2.71	□□□□□ -1.98
VTC3	YPL019C	BEM2	P39960	2167 aa	Known RBP	2.7	□□□□□ -1.98
VTC3	YPL019C	TRP2	P00899	507 aa	Known RBP	2.7	□□□□□ -1.98
VTC3	YPL019C	HTS1	P07263	546 aa	Known RBP	2.7	□□□□□ -1.98
VTC3	YPL019C	PUP3	P25451	205 aa	Known RBP	2.7	□□□□□ -1.98
VTC3	YPL019C	RXT2	P38255	430 aa		2.7	□□□□□ -1.98
VTC3	YPL019C	SAF1	P38352	637 aa		2.7	□□□□□ -1.98
VTC3	YPL019C	NEM1	P38757	446 aa		2.7	□□□□□ -1.98
VTC3	YPL019C	EAF5	P39995	279 aa		2.7	□□□□□ -1.98
VTC3	YPL019C	ROG3	P43602	733 aa		2.7	□□□□□ -1.98
VTC3	YPL019C	YJL049W	P47048	450 aa		2.7	□□□□□ -1.98
VTC3	YPL019C	SGO1	Q08490	590 aa		2.7	□□□□□ -1.98
VTC3	YPL019C	SOG2	Q08817	791 aa		2.7	□□□□□ -1.98
VTC3	YPL019C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	2.7	□□□□□ -1.98	not detected
VTC3	YPL019C	CDC53	Q12018	815 aa	Known RBP	2.7	□□□□□ -1.98
VTC3	YPL019C	IRA2	P19158	3079 aa		2.7	□□□□□ -1.98
VTC3	YPL019C	MET6	P05694	767 aa	Known RBP	2.7	□□□□□ -1.98
VTC3	YPL019C	APE1	P14904	514 aa		2.7	□□□□□ -1.98
VTC3	YPL019C	ADE2	P21264	571 aa	Known RBP	2.7	□□□□□ -1.98
VTC3	YPL019C	BAS1	P22035	811 aa		2.7	□□□□□ -1.98
VTC3	YPL019C	ABD1	P32783	436 aa	Predicted RBP	2.7	□□□□□ -1.98
VTC3	YPL019C	PRS1	P32895	427 aa	Known RBP	2.7	□□□□□ -1.98
VTC3	YPL019C	GPD2	P41911	440 aa	Known RBP	2.7	□□□□□ -1.98
VTC3	YPL019C	SLS1	P42900	643 aa		2.7	□□□□□ -1.98
VTC3	YPL019C	BRE2	P43132	505 aa		2.7	□□□□□ -1.98
VTC3	YPL019C	LAM5	P43560	674 aa		2.7	□□□□□ -1.98
VTC3	YPL019C	SIW14	P53965	281 aa		2.7	□□□□□ -1.98
VTC3	YPL019C	MFM1	Q02783	413 aa		2.7	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 37.1 ms