RNA–Protein interactions for RNA: YOR001W

RRP6, Transcript of Nuclear exosome exonuclease component, yeastyeast

Gene RRP6, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP6YOR001W ZIP2P53061 704 aa2.59□□□□□ -1.99
RRP6YOR001W SSL1Q04673 461 aaPredicted RBP2.59□□□□□ -1.99
RRP6YOR001W ENT2Q05785 613 aa2.59□□□□□ -1.99
RRP6YOR001W RPN7Q06103 429 aaKnown RBP2.59□□□□□ -1.99
RRP6YOR001W CDA1Q06702 301 aa2.59□□□□□ -1.99
RRP6YOR001W RSC58Q07979 502 aa2.59□□□□□ -1.99
RRP6YOR001W YOR022CQ12204 715 aa2.59□□□□□ -1.99
RRP6YOR001W DIF1O13577 133 aa2.58□□□□□ -2
RRP6YOR001W CHS2P14180 963 aa2.58□□□□□ -2
RRP6YOR001W PFK1P16861 987 aaKnown RBP2.58□□□□□ -2
RRP6YOR001W MSM1P22438 575 aa2.58□□□□□ -2
RRP6YOR001W HXT4P32467 576 aa2.58□□□□□ -2
RRP6YOR001W PET309P32522 965 aaPredicted RBP2.58□□□□□ -2
RRP6YOR001W BEM3P32873 1128 aa2.58□□□□□ -2
RRP6YOR001W FLR1P38124 548 aa2.58□□□□□ -2
RRP6YOR001W YHL012WP38709 493 aa2.58□□□□□ -2
RRP6YOR001W IES1P43579 692 aa2.58□□□□□ -2
RRP6YOR001W PCL10P53124 433 aa2.58□□□□□ -2
RRP6YOR001W MEP3P53390 489 aa2.58□□□□□ -2
RRP6YOR001W ARC35P53731 342 aaKnown RBP2.58□□□□□ -2
RRP6YOR001W PTA1Q01329 785 aaPredicted RBP2.58□□□□□ -2
RRP6YOR001W MAP1Q01662 387 aaKnown RBP RIP-Chip data2.58□□□□□ -2not detected
RRP6YOR001W EIS1Q05050 843 aaKnown RBP2.58□□□□□ -2
RRP6YOR001W ASM4Q05166 528 aa2.58□□□□□ -2
RRP6YOR001W YDR056CQ12025 205 aa2.58□□□□□ -2
RRP6YOR001W SVS1Q12254 260 aa2.58□□□□□ -2
RRP6YOR001W MF(ALPHA)2P32435 120 aa2.58□□□□□ -2
RRP6YOR001W SHM2P37291 469 aaKnown RBP2.58□□□□□ -2
RRP6YOR001W AKL1P38080 1108 aaKnown RBP2.58□□□□□ -2
RRP6YOR001W AKR1P39010 764 aa2.58□□□□□ -2
RRP6YOR001W PEX7P39108 375 aa2.58□□□□□ -2
RRP6YOR001W VID28P40547 921 aa2.58□□□□□ -2
RRP6YOR001W CEP3P40969 608 aa2.58□□□□□ -2
RRP6YOR001W OYE3P41816 400 aaPredicted RBP2.58□□□□□ -2
RRP6YOR001W RAI1P53063 387 aaKnown RBP2.58□□□□□ -2
RRP6YOR001W NOP15P53927 220 aaPredicted RBP2.58□□□□□ -2
RRP6YOR001W SIZ1Q04195 904 aa2.58□□□□□ -2
RRP6YOR001W CRR1Q05790 422 aa2.58□□□□□ -2
RRP6YOR001W YPR196WQ06595 470 aa2.58□□□□□ -2
RRP6YOR001W MED7Q08278 222 aa2.58□□□□□ -2
RRP6YOR001W SEC18P18759 758 aaKnown RBP2.57□□□□□ -2
RRP6YOR001W IME1P21190 360 aa2.57□□□□□ -2
RRP6YOR001W TYE7P33122 291 aaPredicted RBP2.57□□□□□ -2
RRP6YOR001W RKM3P38222 552 aa2.57□□□□□ -2
RRP6YOR001W CCZ1P38273 704 aa2.57□□□□□ -2
RRP6YOR001W SAF1P38352 637 aa2.57□□□□□ -2
RRP6YOR001W IMA5P40884 581 aa2.57□□□□□ -2
RRP6YOR001W DUS1P53759 423 aaKnown RBP2.57□□□□□ -2
RRP6YOR001W MDM1Q01846 1127 aa2.57□□□□□ -2
RRP6YOR001W MTD1Q02046 320 aaKnown RBP2.57□□□□□ -2
RRP6YOR001W VPS30Q02948 557 aa2.57□□□□□ -2
RRP6YOR001W MSC2Q03455 724 aa2.57□□□□□ -2
RRP6YOR001W YLR407WQ06070 228 aa2.57□□□□□ -2
RRP6YOR001W YPS7Q06325 596 aa2.57□□□□□ -2
RRP6YOR001W RTK1Q12100 620 aaPredicted RBP2.57□□□□□ -2
RRP6YOR001W RTP1Q12751 981 aa2.57□□□□□ -2
RRP6YOR001W ADH4P10127 382 aa2.57□□□□□ -2
RRP6YOR001W NCP1P16603 691 aaKnown RBP2.57□□□□□ -2
RRP6YOR001W HCA4P20448 770 aaKnown RBP2.57□□□□□ -2
RRP6YOR001W RFA1P22336 621 aaKnown RBP2.57□□□□□ -2
RRP6YOR001W IMP2'P32351 346 aa2.57□□□□□ -2
RRP6YOR001W LIP5P32875 414 aa2.57□□□□□ -2
RRP6YOR001W SRP101P32916 621 aa2.57□□□□□ -2
RRP6YOR001W MDL2P33311 773 aa2.57□□□□□ -2
RRP6YOR001W WHI3P34761 661 aaKnown RBP2.57□□□□□ -2
RRP6YOR001W MIP6P38760 659 aaKnown RBP2.57□□□□□ -2
RRP6YOR001W GID8P40208 455 aa2.57□□□□□ -2
RRP6YOR001W MNT3P40549 630 aa2.57□□□□□ -2
RRP6YOR001W MAD2P40958 196 aa2.57□□□□□ -2
RRP6YOR001W ASK10P48361 1146 aa2.57□□□□□ -2
RRP6YOR001W TEP1P53916 434 aa2.57□□□□□ -2
RRP6YOR001W RCR2Q03446 210 aaKnown RBP2.57□□□□□ -2
RRP6YOR001W NGL1Q08213 363 aaKnown RBP2.57□□□□□ -2
RRP6YOR001W NEW1Q08972 1196 aaKnown RBP2.57□□□□□ -2
RRP6YOR001W CWC2Q12046 339 aaPredicted RBP2.57□□□□□ -2
RRP6YOR001W NUR1Q12066 484 aa2.57□□□□□ -2
RRP6YOR001W OSW2Q12202 724 aa2.57□□□□□ -2
RRP6YOR001W ARP7Q12406 477 aa2.57□□□□□ -2
RRP6YOR001W PRC1P00729 532 aa2.56□□□□□ -2
RRP6YOR001W PHO3P24031 467 aa2.56□□□□□ -2
RRP6YOR001W YPT7P32939 208 aa2.56□□□□□ -2
RRP6YOR001W ESL1P40456 1118 aa2.56□□□□□ -2
RRP6YOR001W YIL092WP40497 633 aa2.56□□□□□ -2
RRP6YOR001W TAF1P46677 1066 aa2.56□□□□□ -2
RRP6YOR001W MAD3P47074 515 aa2.56□□□□□ -2
RRP6YOR001W UPF3P48412 387 aaKnown RBP2.56□□□□□ -2
RRP6YOR001W RNR4P49723 345 aaKnown RBP2.56□□□□□ -2
RRP6YOR001W TAN1P53072 289 aaPredicted RBP2.56□□□□□ -2
RRP6YOR001W RRT6P53117 311 aaPredicted RBP2.56□□□□□ -2
RRP6YOR001W IMH1Q06704 911 aaKnown RBP2.56□□□□□ -2
RRP6YOR001W STP4Q07351 490 aa2.56□□□□□ -2
RRP6YOR001W SDH5Q08230 162 aa2.56□□□□□ -2
RRP6YOR001W NSI1Q12457 570 aa2.56□□□□□ -2
RRP6YOR001W PRP4P20053 465 aaKnown RBP2.56□□□□□ -2
RRP6YOR001W MTC7P32633 139 aa2.56□□□□□ -2
RRP6YOR001W PGM1P33401 570 aaKnown RBP2.56□□□□□ -2
RRP6YOR001W CTF8P38877 133 aa2.56□□□□□ -2
RRP6YOR001W YHR202WP38887 602 aa2.56□□□□□ -2
RRP6YOR001W DUN1P39009 513 aa2.56□□□□□ -2
RRP6YOR001W NDE1P40215 560 aa2.56□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 32.5 ms