RNA–Protein interactions for RNA: YMR172C-A

YMR172C-A, Transcript of Dubious open reading frame, yeastyeast

Gene YMR172C-A, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YMR172C-AYMR172C-A OSH2Q12451 1283 aa2.52□□□□□ -2.01
YMR172C-AYMR172C-A RPA135P22138 1203 aaKnown RBP2.51□□□□□ -2.01
YMR172C-AYMR172C-A CTK1Q03957 528 aaKnown RBP2.51□□□□□ -2.01
YMR172C-AYMR172C-A HBN1Q96VH4 193 aa2.51□□□□□ -2.01
YMR172C-AYMR172C-A DIF1O13577 133 aa2.5□□□□□ -2.01
YMR172C-AYMR172C-A TOM70P07213 617 aaKnown RBP2.5□□□□□ -2.01
YMR172C-AYMR172C-A XBP1P40489 647 aa2.5□□□□□ -2.01
YMR172C-AYMR172C-A PRP31P49704 494 aaPredicted RBP2.5□□□□□ -2.01
YMR172C-AYMR172C-A TEX1P53851 422 aaKnown RBP2.5□□□□□ -2.01
YMR172C-AYMR172C-A YDR514CQ04408 483 aa2.5□□□□□ -2.01
YMR172C-AYMR172C-A REH1Q06709 432 aa2.5□□□□□ -2.01
YMR172C-AYMR172C-A FMP25Q08023 583 aa2.5□□□□□ -2.01
YMR172C-AYMR172C-A WRS1Q12109 432 aaKnown RBP2.5□□□□□ -2.01
YMR172C-AYMR172C-A NUP1P20676 1076 aa2.49□□□□□ -2.01
YMR172C-AYMR172C-A EMC3P36039 253 aa2.49□□□□□ -2.01
YMR172C-AYMR172C-A APT2P36973 181 aa2.49□□□□□ -2.01
YMR172C-AYMR172C-A NET1P47035 1189 aa2.49□□□□□ -2.01
YMR172C-AYMR172C-A ZDS1P50111 915 aaKnown RBP2.49□□□□□ -2.01
YMR172C-AYMR172C-A UTP8P53276 713 aaKnown RBP2.49□□□□□ -2.01
YMR172C-AYMR172C-A FMP30Q02883 468 aa2.49□□□□□ -2.01
YMR172C-AYMR172C-A YDL124WQ07551 312 aaKnown RBP2.49□□□□□ -2.01
YMR172C-AYMR172C-A RPL8BP29453 256 aaKnown RBP2.48□□□□□ -2.01
YMR172C-AYMR172C-A PHO11P35842 467 aa2.48□□□□□ -2.01
YMR172C-AYMR172C-A PHO12P38693 467 aa2.48□□□□□ -2.01
YMR172C-AYMR172C-A FMO1P38866 432 aa2.48□□□□□ -2.01
YMR172C-AYMR172C-A PAC2P39937 518 aa2.48□□□□□ -2.01
YMR172C-AYMR172C-A RLP7P40693 322 aaKnown RBP2.48□□□□□ -2.01
YMR172C-AYMR172C-A GYP8P43570 497 aa2.48□□□□□ -2.01
YMR172C-AYMR172C-A MTL1P53214 551 aa2.48□□□□□ -2.01
YMR172C-AYMR172C-A ATG4P53867 494 aa2.48□□□□□ -2.01
YMR172C-AYMR172C-A OSW1Q08692 278 aa2.48□□□□□ -2.01
YMR172C-AYMR172C-A THI21Q08975 551 aa2.48□□□□□ -2.01
YMR172C-AYMR172C-A USV1Q12132 391 aa2.48□□□□□ -2.01
YMR172C-AYMR172C-A RGT2Q12300 763 aa2.48□□□□□ -2.01
YMR172C-AYMR172C-A YLR149CQ99296 730 aa2.48□□□□□ -2.01
YMR172C-AYMR172C-A HSP60P19882 572 aaKnown RBP2.47□□□□□ -2.01
YMR172C-AYMR172C-A GRX1P25373 110 aaKnown RBP2.47□□□□□ -2.01
YMR172C-AYMR172C-A MUP3P38734 546 aa2.47□□□□□ -2.01
YMR172C-AYMR172C-A NUP60P39705 539 aa2.47□□□□□ -2.01
YMR172C-AYMR172C-A HUL4P40985 892 aa2.47□□□□□ -2.01
YMR172C-AYMR172C-A BAP3P41815 604 aa2.47□□□□□ -2.01
YMR172C-AYMR172C-A UBP6P43593 499 aaKnown RBP2.47□□□□□ -2.01
YMR172C-AYMR172C-A ZIP2P53061 704 aa2.47□□□□□ -2.01
YMR172C-AYMR172C-A NAN1Q02931 896 aaKnown RBP2.47□□□□□ -2.01
YMR172C-AYMR172C-A PHR1P05066 565 aaKnown RBP RIP-Chip data2.46□□□□□ -2.02not detected
YMR172C-AYMR172C-A SIR3P06701 978 aa2.46□□□□□ -2.02
YMR172C-AYMR172C-A STE12P13574 688 aa2.46□□□□□ -2.02
YMR172C-AYMR172C-A KCC4P25389 1037 aa2.46□□□□□ -2.02
YMR172C-AYMR172C-A ECM1P39715 212 aa2.46□□□□□ -2.02
YMR172C-AYMR172C-A ALY2P47029 1046 aa2.46□□□□□ -2.02
YMR172C-AYMR172C-A YGR283CP53336 341 aaPredicted RBP2.46□□□□□ -2.02
YMR172C-AYMR172C-A SPC98P53540 846 aa2.46□□□□□ -2.02
YMR172C-AYMR172C-A MPS1P54199 764 aa2.46□□□□□ -2.02
YMR172C-AYMR172C-A ORC4P54791 529 aa2.46□□□□□ -2.02
YMR172C-AYMR172C-A MET7Q08645 548 aa2.46□□□□□ -2.02
YMR172C-AYMR172C-A PER1P25625 357 aa2.45□□□□□ -2.02
YMR172C-AYMR172C-A YUR1P26725 428 aa2.45□□□□□ -2.02
YMR172C-AYMR172C-A GMH1P36125 273 aa2.45□□□□□ -2.02
YMR172C-AYMR172C-A TRZ1P36159 838 aaPredicted RBP2.45□□□□□ -2.02
YMR172C-AYMR172C-A HRB1P38922 454 aaKnown RBP RIP-Chip data2.45□□□□□ -2.02not detected
YMR172C-AYMR172C-A LTP1P40347 161 aa2.45□□□□□ -2.02
YMR172C-AYMR172C-A ALG2P43636 503 aa2.45□□□□□ -2.02
YMR172C-AYMR172C-A BNA3P47039 444 aaKnown RBP2.45□□□□□ -2.02
YMR172C-AYMR172C-A MRK1P50873 501 aa2.45□□□□□ -2.02
YMR172C-AYMR172C-A YGR125WP53273 1036 aa2.45□□□□□ -2.02
YMR172C-AYMR172C-A GPR1Q12361 961 aa2.45□□□□□ -2.02
YMR172C-AYMR172C-A ZRT2Q12436 422 aa2.45□□□□□ -2.02
YMR172C-AYMR172C-A YBR182C-AQ8TGU6 64 aa2.45□□□□□ -2.02
YMR172C-AYMR172C-A ADE2P21264 571 aaKnown RBP2.44□□□□□ -2.02
YMR172C-AYMR172C-A FUB1P25659 250 aa2.44□□□□□ -2.02
YMR172C-AYMR172C-A YHR112CP38716 378 aa2.44□□□□□ -2.02
YMR172C-AYMR172C-A YFL052WP43551 465 aa2.44□□□□□ -2.02
YMR172C-AYMR172C-A MLH3Q12083 715 aa2.44□□□□□ -2.02
YMR172C-AYMR172C-A PGK1P00560 416 aaKnown RBP2.43□□□□□ -2.02
YMR172C-AYMR172C-A RAD4P14736 754 aa2.43□□□□□ -2.02
YMR172C-AYMR172C-A UBS1P38290 277 aa2.43□□□□□ -2.02
YMR172C-AYMR172C-A LYS9P38999 446 aa2.43□□□□□ -2.02
YMR172C-AYMR172C-A TIM54P47045 478 aa2.43□□□□□ -2.02
YMR172C-AYMR172C-A COX18P53239 316 aa2.43□□□□□ -2.02
YMR172C-AYMR172C-A FHN1P53279 174 aa2.43□□□□□ -2.02
YMR172C-AYMR172C-A CLF1Q12309 687 aaPredicted RBP2.43□□□□□ -2.02
YMR172C-AYMR172C-A ADE5,7P07244 802 aaKnown RBP2.42□□□□□ -2.02
YMR172C-AYMR172C-A ABF1P14164 731 aa2.42□□□□□ -2.02
YMR172C-AYMR172C-A THR1P17423 357 aaKnown RBP2.42□□□□□ -2.02
YMR172C-AYMR172C-A SAT4P25333 603 aaKnown RBP2.42□□□□□ -2.02
YMR172C-AYMR172C-A APL2P36000 726 aaPredicted RBP2.42□□□□□ -2.02
YMR172C-AYMR172C-A STB2P46679 850 aa2.42□□□□□ -2.02
YMR172C-AYMR172C-A CIT1P00890 479 aa2.41□□□□□ -2.02
YMR172C-AYMR172C-A CRP1P38845 465 aaKnown RBP2.41□□□□□ -2.02
YMR172C-AYMR172C-A BPL1P48445 690 aaPredicted RBP2.41□□□□□ -2.02
YMR172C-AYMR172C-A YGR151CP53287 111 aa2.41□□□□□ -2.02
YMR172C-AYMR172C-A ARG5,6Q01217 863 aa2.41□□□□□ -2.02
YMR172C-AYMR172C-A MCM21Q06675 368 aa2.41□□□□□ -2.02
YMR172C-AYMR172C-A SSF2Q12153 453 aaPredicted RBP2.41□□□□□ -2.02
YMR172C-AYMR172C-A HRP1Q99383 534 aaKnown RBP2.41□□□□□ -2.02
YMR172C-AYMR172C-A APN1P22936 367 aa2.4□□□□□ -2.03
YMR172C-AYMR172C-A UGP1P32861 499 aaKnown RBP2.4□□□□□ -2.03
YMR172C-AYMR172C-A SET3P36124 751 aa2.4□□□□□ -2.03
YMR172C-AYMR172C-A PMC1P38929 1173 aaPredicted RBP2.4□□□□□ -2.03
YMR172C-AYMR172C-A RSP5P39940 809 aaKnown RBP2.4□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 18 ms