RNA–Protein interactions for RNA: YMR131C

RRB1, Transcript of Nuclear protein involved in early steps of ribosome biogenesis, yeast

Gene RRB1, Length 1,536 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRB1	YMR131C	SDH1	Q00711	640 aa		5.01	□□□□□ -1.61
RRB1	YMR131C	SML1	Q04964	104 aa		5.01	□□□□□ -1.61
RRB1	YMR131C	VAC14	Q06708	880 aa		5.01	□□□□□ -1.61
RRB1	YMR131C	THS1	P04801	734 aa	Known RBP	5	□□□□□ -1.61
RRB1	YMR131C	TOM70	P07213	617 aa	Known RBP	5	□□□□□ -1.61
RRB1	YMR131C	SRD1	P09007	221 aa		5	□□□□□ -1.61
RRB1	YMR131C	YEL076C-A	P0CX16	216 aa		5	□□□□□ -1.61
RRB1	YMR131C	YLR464W	P0CX17	216 aa		5	□□□□□ -1.61
RRB1	YMR131C	SEC23	P15303	768 aa	Known RBP	5	□□□□□ -1.61
RRB1	YMR131C	IDI1	P15496	288 aa		5	□□□□□ -1.61
RRB1	YMR131C	ISY1	P21374	235 aa	Predicted RBP	5	□□□□□ -1.61
RRB1	YMR131C	CDC60	P26637	1090 aa	Known RBP	5	□□□□□ -1.61
RRB1	YMR131C	APL1	P27351	700 aa		5	□□□□□ -1.61
RRB1	YMR131C	TIF4631	P39935	952 aa	Known RBP	5	□□□□□ -1.61
RRB1	YMR131C	YEL076C	P39971	216 aa		5	□□□□□ -1.61
RRB1	YMR131C	COS5	P47187	383 aa		5	□□□□□ -1.61
RRB1	YMR131C	CCM1	P48237	864 aa	Predicted RBP	5	□□□□□ -1.61
RRB1	YMR131C	YGR117C	P53270	476 aa		5	□□□□□ -1.61
RRB1	YMR131C	TOF1	P53840	1238 aa		5	□□□□□ -1.61
RRB1	YMR131C	YML037C	Q03703	340 aa		5	□□□□□ -1.61
RRB1	YMR131C	ATG23	Q06671	453 aa		5	□□□□□ -1.61
RRB1	YMR131C	SUB2	Q07478	446 aa	Known RBP	5	□□□□□ -1.61
RRB1	YMR131C	MED1	Q12321	566 aa		5	□□□□□ -1.61
RRB1	YMR131C	OSH2	Q12451	1283 aa		5	□□□□□ -1.61
RRB1	YMR131C	TAD3	Q9URQ3	322 aa		5	□□□□□ -1.61
RRB1	YMR131C	CLN3	P13365	580 aa		4.99	□□□□□ -1.61
RRB1	YMR131C	CDC48	P25694	835 aa	Known RBP	4.99	□□□□□ -1.61
RRB1	YMR131C	ATG19	P35193	415 aa		4.99	□□□□□ -1.61
RRB1	YMR131C	BYE1	P36106	594 aa		4.99	□□□□□ -1.61
RRB1	YMR131C	YKR018C	P36114	725 aa		4.99	□□□□□ -1.61
RRB1	YMR131C	PHO88	P38264	188 aa	Predicted RBP	4.99	□□□□□ -1.61
RRB1	YMR131C	CCT4	P39078	528 aa	Known RBP	4.99	□□□□□ -1.61
RRB1	YMR131C	NUP82	P40368	713 aa		4.99	□□□□□ -1.61
RRB1	YMR131C	HFM1	P51979	1187 aa		4.99	□□□□□ -1.61
RRB1	YMR131C	LIF1	P53150	421 aa		4.99	□□□□□ -1.61
RRB1	YMR131C	SOK2	P53438	785 aa	Predicted RBP	4.99	□□□□□ -1.61
RRB1	YMR131C	YLR001C	Q07895	862 aa		4.99	□□□□□ -1.61
RRB1	YMR131C	MLH2	Q07980	695 aa		4.99	□□□□□ -1.61
RRB1	YMR131C	SAM1	P10659	382 aa	Known RBP	4.98	□□□□□ -1.61
RRB1	YMR131C	RAD18	P10862	487 aa		4.98	□□□□□ -1.61
RRB1	YMR131C	SUP45	P12385	437 aa	Known RBP	4.98	□□□□□ -1.61
RRB1	YMR131C	RTG2	P32608	588 aa	Known RBP	4.98	□□□□□ -1.61
RRB1	YMR131C	RRP1	P35178	278 aa	Predicted RBP	4.98	□□□□□ -1.61
RRB1	YMR131C	UBP13	P38187	747 aa		4.98	□□□□□ -1.61
RRB1	YMR131C	NBP1	P52919	319 aa	Predicted RBP	4.98	□□□□□ -1.61
RRB1	YMR131C	MAL13	P53338	473 aa		4.98	□□□□□ -1.61
RRB1	YMR131C	DIP5	P53388	608 aa		4.98	□□□□□ -1.61
RRB1	YMR131C	ORC4	P54791	529 aa		4.98	□□□□□ -1.61
RRB1	YMR131C	YMR114C	Q04471	368 aa	Known RBP	4.98	□□□□□ -1.61
RRB1	YMR131C	TSR1	Q07381	788 aa	Known RBP	4.98	□□□□□ -1.61
RRB1	YMR131C	CRD1	Q07560	283 aa		4.98	□□□□□ -1.61
RRB1	YMR131C	NEW1	Q08972	1196 aa	Known RBP	4.98	□□□□□ -1.61
RRB1	YMR131C	YPL277C	Q08989	487 aa		4.98	□□□□□ -1.61
RRB1	YMR131C	ARP6	Q12509	438 aa		4.98	□□□□□ -1.61
RRB1	YMR131C	PGK1	P00560	416 aa	Known RBP	4.97	□□□□□ -1.61
RRB1	YMR131C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	RIP-Chip
RRB1	YMR131C	PPR1	P07272	904 aa	Predicted RBP	4.97	□□□□□ -1.61
RRB1	YMR131C	PCK1	P10963	549 aa		4.97	□□□□□ -1.61
RRB1	YMR131C	RPO26	P20435	155 aa		4.97	□□□□□ -1.61
RRB1	YMR131C	DBP5	P20449	482 aa	Known RBP	4.97	□□□□□ -1.61
RRB1	YMR131C	CKI1	P20485	582 aa		4.97	□□□□□ -1.61
RRB1	YMR131C	DAL7	P21826	554 aa		4.97	□□□□□ -1.61
RRB1	YMR131C	RAD57	P25301	460 aa		4.97	□□□□□ -1.61
RRB1	YMR131C	MCD4	P36051	919 aa		4.97	□□□□□ -1.61
RRB1	YMR131C	ULP2	P40537	1034 aa	Predicted RBP	4.97	□□□□□ -1.61
RRB1	YMR131C	HUL4	P40985	892 aa		4.97	□□□□□ -1.61
RRB1	YMR131C	VID30	P53076	958 aa		4.97	□□□□□ -1.61
RRB1	YMR131C	NCS2	P53923	493 aa	Predicted RBP	4.97	□□□□□ -1.61
RRB1	YMR131C	SOV1	Q04748	898 aa		4.97	□□□□□ -1.61
RRB1	YMR131C	RUD3	Q12234	484 aa	Known RBP	4.97	□□□□□ -1.61
RRB1	YMR131C	PHO8	P11491	566 aa		4.97	□□□□□ -1.61
RRB1	YMR131C	TCP1	P12612	559 aa	Known RBP	4.97	□□□□□ -1.61
RRB1	YMR131C	STE11	P23561	717 aa		4.97	□□□□□ -1.61
RRB1	YMR131C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	not detected
RRB1	YMR131C	SUV3	P32580	737 aa		4.97	□□□□□ -1.61
RRB1	YMR131C	UGA4	P32837	571 aa		4.97	□□□□□ -1.61
RRB1	YMR131C	KTR2	P33550	425 aa		4.97	□□□□□ -1.61
RRB1	YMR131C	VPS35	P34110	944 aa		4.97	□□□□□ -1.61
RRB1	YMR131C	OCT1	P35999	772 aa		4.97	□□□□□ -1.61
RRB1	YMR131C	YKL023W	P36103	277 aa	Known RBP	4.97	□□□□□ -1.61
RRB1	YMR131C	OLA1	P38219	394 aa	Known RBP	4.97	□□□□□ -1.61
RRB1	YMR131C	SMF1	P38925	575 aa		4.97	□□□□□ -1.61
RRB1	YMR131C	SAP1	P39955	897 aa	Known RBP	4.97	□□□□□ -1.61
RRB1	YMR131C	VAB2	P40003	282 aa		4.97	□□□□□ -1.61
RRB1	YMR131C	EFM4	P40516	257 aa		4.97	□□□□□ -1.61
RRB1	YMR131C	MAD1	P40957	749 aa		4.97	□□□□□ -1.61
RRB1	YMR131C	ZPR1	P53303	486 aa	Known RBP	4.97	□□□□□ -1.61
RRB1	YMR131C	CWC22	P53333	577 aa	Known RBP	4.97	□□□□□ -1.61
RRB1	YMR131C	JJJ1	P53863	590 aa		4.97	□□□□□ -1.61
RRB1	YMR131C	CEF1	Q03654	590 aa	Predicted RBP	4.97	□□□□□ -1.61
RRB1	YMR131C	FUS2	Q05670	677 aa		4.97	□□□□□ -1.61
RRB1	YMR131C	ZRT2	Q12436	422 aa		4.97	□□□□□ -1.61
RRB1	YMR131C	CSR2	Q12734	1121 aa		4.97	□□□□□ -1.61
RRB1	YMR131C	CDC8	P00572	216 aa		4.96	□□□□□ -1.62
RRB1	YMR131C	GFA1	P14742	717 aa	Known RBP	4.96	□□□□□ -1.62
RRB1	YMR131C	PER1	P25625	357 aa		4.96	□□□□□ -1.62
RRB1	YMR131C	NFU1	P32860	256 aa		4.96	□□□□□ -1.62
RRB1	YMR131C	BUD16	P39988	312 aa		4.96	□□□□□ -1.62
RRB1	YMR131C	MMM1	P41800	426 aa		4.96	□□□□□ -1.62
RRB1	YMR131C	VPS53	P47061	822 aa		4.96	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 37.4 ms