RNA–Protein interactions for RNA: YMR077C

VPS20, Transcript of Myristoylated subunit of the ESCRT-III complex, yeast

Gene VPS20, Length 666 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS20	YMR077C	GLO1	P50107	326 aa		5.25	□□□□□ -1.57
VPS20	YMR077C	YBP2	P53169	641 aa		5.25	□□□□□ -1.57
VPS20	YMR077C	SNU71	P53207	620 aa	Known RBP	5.25	□□□□□ -1.57
VPS20	YMR077C	TEX1	P53851	422 aa	Known RBP	5.25	□□□□□ -1.57
VPS20	YMR077C	YDL124W	Q07551	312 aa	Known RBP	5.25	□□□□□ -1.57
VPS20	YMR077C	SSF2	Q12153	453 aa	Predicted RBP	5.25	□□□□□ -1.57
VPS20	YMR077C	ORC2	P32833	620 aa		5.24	□□□□□ -1.57
VPS20	YMR077C	BDH2	P39713	417 aa		5.24	□□□□□ -1.57
VPS20	YMR077C	SHR5	P41912	237 aa		5.24	□□□□□ -1.57
VPS20	YMR077C	MRI1	Q06489	411 aa	Known RBP	5.24	□□□□□ -1.57
VPS20	YMR077C	YBR182C-A	Q8TGU6	64 aa		5.24	□□□□□ -1.57
VPS20	YMR077C	EMP70	P32802	667 aa		5.23	□□□□□ -1.57
VPS20	YMR077C	HUL4	P40985	892 aa		5.23	□□□□□ -1.57
VPS20	YMR077C	ZIP2	P53061	704 aa		5.23	□□□□□ -1.57
VPS20	YMR077C	RLP7	P40693	322 aa	Known RBP	5.22	□□□□□ -1.57
VPS20	YMR077C	ATP25	Q03153	612 aa		5.22	□□□□□ -1.57
VPS20	YMR077C	CTK1	Q03957	528 aa	Known RBP	5.22	□□□□□ -1.57
VPS20	YMR077C	CIT1	P00890	479 aa		5.21	□□□□□ -1.58
VPS20	YMR077C	TOM70	P07213	617 aa	Known RBP	5.21	□□□□□ -1.58
VPS20	YMR077C	ALG2	P43636	503 aa		5.21	□□□□□ -1.58
VPS20	YMR077C	DIF1	O13577	133 aa		5.2	□□□□□ -1.58
VPS20	YMR077C	PAC2	P39937	518 aa		5.2	□□□□□ -1.58
VPS20	YMR077C	PRP31	P49704	494 aa	Predicted RBP	5.2	□□□□□ -1.58
VPS20	YMR077C	PAN2	P53010	1115 aa	Predicted RBP	5.2	□□□□□ -1.58
VPS20	YMR077C	ATG4	P53867	494 aa		5.2	□□□□□ -1.58
VPS20	YMR077C	TAF8	Q03750	510 aa		5.2	□□□□□ -1.58
VPS20	YMR077C	MET7	Q08645	548 aa		5.2	□□□□□ -1.58
VPS20	YMR077C	HOM2	P13663	365 aa	Known RBP	5.18	□□□□□ -1.58
VPS20	YMR077C	RAD4	P14736	754 aa		5.18	□□□□□ -1.58
VPS20	YMR077C	MVD1	P32377	396 aa	Known RBP	5.18	□□□□□ -1.58
VPS20	YMR077C	SPC29	P33419	253 aa		5.18	□□□□□ -1.58
VPS20	YMR077C	SFB3	P38810	929 aa		5.18	□□□□□ -1.58
VPS20	YMR077C	NUP60	P39705	539 aa		5.18	□□□□□ -1.58
VPS20	YMR077C	MRK1	P50873	501 aa		5.18	□□□□□ -1.58
VPS20	YMR077C	YGR125W	P53273	1036 aa		5.18	□□□□□ -1.58
VPS20	YMR077C	FHN1	P53279	174 aa		5.18	□□□□□ -1.58
VPS20	YMR077C	VPS34	P22543	875 aa		5.17	□□□□□ -1.58
VPS20	YMR077C	CCR4	P31384	837 aa	Known RBP	5.17	□□□□□ -1.58
VPS20	YMR077C	APL2	P36000	726 aa	Predicted RBP	5.17	□□□□□ -1.58
VPS20	YMR077C	TRZ1	P36159	838 aa	Predicted RBP	5.17	□□□□□ -1.58
VPS20	YMR077C	APT2	P36973	181 aa		5.17	□□□□□ -1.58
VPS20	YMR077C	UBS1	P38290	277 aa		5.17	□□□□□ -1.58
VPS20	YMR077C	FMO1	P38866	432 aa		5.17	□□□□□ -1.58
VPS20	YMR077C	HXT16	P47185	567 aa		5.17	□□□□□ -1.58
VPS20	YMR077C	UBC9	P50623	157 aa	Predicted RBP	5.17	□□□□□ -1.58
VPS20	YMR077C	MTL1	P53214	551 aa		5.17	□□□□□ -1.58
VPS20	YMR077C	SEG1	Q04279	960 aa		5.16	□□□□□ -1.58
VPS20	YMR077C	CLF1	Q12309	687 aa	Predicted RBP	5.16	□□□□□ -1.58
VPS20	YMR077C	MCM21	Q06675	368 aa		5.15	□□□□□ -1.59
VPS20	YMR077C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	5.14	□□□□□ -1.59	not detected
VPS20	YMR077C	PHO11	P35842	467 aa		5.14	□□□□□ -1.59
VPS20	YMR077C	PHO12	P38693	467 aa		5.14	□□□□□ -1.59
VPS20	YMR077C	YHR112C	P38716	378 aa		5.14	□□□□□ -1.59
VPS20	YMR077C	LYS9	P38999	446 aa		5.14	□□□□□ -1.59
VPS20	YMR077C	TIM54	P47045	478 aa		5.14	□□□□□ -1.59
VPS20	YMR077C	ORC4	P54791	529 aa		5.14	□□□□□ -1.59
VPS20	YMR077C	ARG5,6	Q01217	863 aa		5.14	□□□□□ -1.59
VPS20	YMR077C	RIM13	Q03792	727 aa		5.14	□□□□□ -1.59
VPS20	YMR077C	SLK19	Q08581	821 aa	Known RBP	5.14	□□□□□ -1.59
VPS20	YMR077C	ADE2	P21264	571 aa	Known RBP	5.13	□□□□□ -1.59
VPS20	YMR077C	ALY2	P47029	1046 aa		5.13	□□□□□ -1.59
VPS20	YMR077C	MUP3	P38734	546 aa		5.12	□□□□□ -1.59
VPS20	YMR077C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	5.12	□□□□□ -1.59	not detected
VPS20	YMR077C	BET3	P36149	193 aa		5.11	□□□□□ -1.59
VPS20	YMR077C	YJL049W	P47048	450 aa		5.11	□□□□□ -1.59
VPS20	YMR077C	OSW1	Q08692	278 aa		5.11	□□□□□ -1.59
VPS20	YMR077C	FLC1	Q08967	793 aa		5.11	□□□□□ -1.59
VPS20	YMR077C	ZRT2	Q12436	422 aa		5.11	□□□□□ -1.59
VPS20	YMR077C	PAM1	P37304	830 aa	Known RBP	5.1	□□□□□ -1.59
VPS20	YMR077C	YHR020W	P38708	688 aa	Known RBP	5.1	□□□□□ -1.59
VPS20	YMR077C	LTP1	P40347	161 aa		5.1	□□□□□ -1.59
VPS20	YMR077C	MLH3	Q12083	715 aa		5.1	□□□□□ -1.59
VPS20	YMR077C	HRP1	Q99383	534 aa	Known RBP	5.1	□□□□□ -1.59
VPS20	YMR077C	THR1	P17423	357 aa	Known RBP	5.09	□□□□□ -1.59
VPS20	YMR077C	PER1	P25625	357 aa		5.09	□□□□□ -1.59
VPS20	YMR077C	FUB1	P25659	250 aa		5.09	□□□□□ -1.59
VPS20	YMR077C	GMH1	P36125	273 aa		5.09	□□□□□ -1.59
VPS20	YMR077C	BNA3	P47039	444 aa	Known RBP	5.09	□□□□□ -1.59
VPS20	YMR077C	YDR338C	Q05497	695 aa		5.09	□□□□□ -1.59
VPS20	YMR077C	PTP1	P25044	335 aa		5.08	□□□□□ -1.6
VPS20	YMR077C	KCC4	P25389	1037 aa		5.08	□□□□□ -1.6
VPS20	YMR077C	MIP6	P38760	659 aa	Known RBP	5.08	□□□□□ -1.6
VPS20	YMR077C	GAT1	P43574	510 aa		5.08	□□□□□ -1.6
VPS20	YMR077C	TY4A-J	P47023	414 aa		5.08	□□□□□ -1.6
VPS20	YMR077C	BNA2	P47125	453 aa		5.08	□□□□□ -1.6
VPS20	YMR077C	REC102	Q02721	264 aa		5.08	□□□□□ -1.6
VPS20	YMR077C	CRP1	P38845	465 aa	Known RBP	5.07	□□□□□ -1.6
VPS20	YMR077C	YFL052W	P43551	465 aa		5.07	□□□□□ -1.6
VPS20	YMR077C	USV1	Q12132	391 aa		5.07	□□□□□ -1.6
VPS20	YMR077C	CAN1	P04817	590 aa		5.06	□□□□□ -1.6
VPS20	YMR077C	HMO1	Q03973	246 aa	Known RBP	5.06	□□□□□ -1.6
VPS20	YMR077C	ABF1	P14164	731 aa		5.05	□□□□□ -1.6
VPS20	YMR077C	RPA135	P22138	1203 aa	Known RBP	5.05	□□□□□ -1.6
VPS20	YMR077C	PEX1	P24004	1043 aa		5.05	□□□□□ -1.6
VPS20	YMR077C	ERG6	P25087	383 aa	Known RBP	5.05	□□□□□ -1.6
VPS20	YMR077C	RSP5	P39940	809 aa	Known RBP	5.05	□□□□□ -1.6
VPS20	YMR077C	RTA1	P53047	317 aa		5.05	□□□□□ -1.6
VPS20	YMR077C	YLR149C	Q99296	730 aa		5.05	□□□□□ -1.6
VPS20	YMR077C	PGK1	P00560	416 aa	Known RBP	5.04	□□□□□ -1.6
VPS20	YMR077C	GAL11	P19659	1081 aa		5.04	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 82.1 ms