RNA–Protein interactions for RNA: YMR050C

YMR050C, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YMR050C, Length 5,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YMR050CYMR050C SEC9P40357 651 aa2.78□□□□□ -1.96
YMR050CYMR050C ALR2P43553 858 aa2.78□□□□□ -1.96
YMR050CYMR050C PRP24P49960 444 aaKnown RBP2.78□□□□□ -1.96
YMR050CYMR050C HOS3Q02959 697 aaKnown RBP2.78□□□□□ -1.96
YMR050CYMR050C SRL4Q03085 281 aa2.78□□□□□ -1.96
YMR050CYMR050C YPQ2Q06328 317 aa2.78□□□□□ -1.96
YMR050CYMR050C SLK19Q08581 821 aaKnown RBP2.78□□□□□ -1.96
YMR050CYMR050C YLL054CQ12244 843 aa2.78□□□□□ -1.96
YMR050CYMR050C MET2P08465 486 aa2.78□□□□□ -1.96
YMR050CYMR050C SRD1P09007 221 aa2.78□□□□□ -1.96
YMR050CYMR050C MAS2P11914 482 aa2.78□□□□□ -1.96
YMR050CYMR050C MSS51P32335 436 aa2.78□□□□□ -1.96
YMR050CYMR050C SSH4P32343 579 aa2.78□□□□□ -1.96
YMR050CYMR050C MED6P38782 295 aa2.78□□□□□ -1.96
YMR050CYMR050C LSB6P42951 607 aa2.78□□□□□ -1.96
YMR050CYMR050C GOR1P53839 350 aa2.78□□□□□ -1.96
YMR050CYMR050C MZM1Q03429 123 aaPredicted RBP2.78□□□□□ -1.96
YMR050CYMR050C TSA2Q04120 196 aa2.78□□□□□ -1.96
YMR050CYMR050C MCM16Q12262 181 aa2.78□□□□□ -1.96
YMR050CYMR050C TRM11Q12463 433 aa2.78□□□□□ -1.96
YMR050CYMR050C NHA1Q99271 985 aa2.78□□□□□ -1.96
YMR050CYMR050C PEP1P32319 1579 aa2.78□□□□□ -1.96
YMR050CYMR050C AEP2P22136 580 aa2.78□□□□□ -1.96
YMR050CYMR050C PRP22P24384 1145 aaKnown RBP2.78□□□□□ -1.96
YMR050CYMR050C SPS22P25380 463 aa2.78□□□□□ -1.96
YMR050CYMR050C SKI2P35207 1287 aaKnown RBP RIP-Chip data2.78□□□□□ -1.96not detected
YMR050CYMR050C ATG12P38316 186 aa2.78□□□□□ -1.96
YMR050CYMR050C MSS4P38994 779 aa2.78□□□□□ -1.96
YMR050CYMR050C TPA1P40032 644 aaKnown RBP2.78□□□□□ -1.96
YMR050CYMR050C RGI2P40188 164 aa2.78□□□□□ -1.96
YMR050CYMR050C IRC6P43615 237 aa2.78□□□□□ -1.96
YMR050CYMR050C YGL108CP53139 140 aa2.78□□□□□ -1.96
YMR050CYMR050C RPT6Q01939 405 aaKnown RBP2.78□□□□□ -1.96
YMR050CYMR050C RPM2Q02773 1202 aa2.78□□□□□ -1.96
YMR050CYMR050C RLI1Q03195 608 aaKnown RBP2.78□□□□□ -1.96
YMR050CYMR050C INM2Q05533 292 aa2.78□□□□□ -1.96
YMR050CYMR050C TAZ1Q06510 381 aa2.78□□□□□ -1.96
YMR050CYMR050C ZIP1P31111 875 aa2.78□□□□□ -1.96
YMR050CYMR050C TIF4631P39935 952 aaKnown RBP2.78□□□□□ -1.96
YMR050CYMR050C YGL138CP53122 345 aa2.78□□□□□ -1.96
YMR050CYMR050C ULP1Q02724 621 aa2.78□□□□□ -1.96
YMR050CYMR050C WAR1Q03631 944 aa2.78□□□□□ -1.96
YMR050CYMR050C SHS1Q07657 551 aa2.78□□□□□ -1.96
YMR050CYMR050C GAS5Q08193 484 aa2.78□□□□□ -1.96
YMR050CYMR050C LEU9Q12166 604 aaKnown RBP2.78□□□□□ -1.96
YMR050CYMR050C PDR5P33302 1511 aaKnown RBP2.78□□□□□ -1.96
YMR050CYMR050C COX13P32799 129 aa2.77□□□□□ -1.97
YMR050CYMR050C LRP1P38801 184 aaKnown RBP2.77□□□□□ -1.97
YMR050CYMR050C SPF1P39986 1215 aaKnown RBP2.77□□□□□ -1.97
YMR050CYMR050C SBE2P42223 864 aaKnown RBP2.77□□□□□ -1.97
YMR050CYMR050C ROK1P45818 564 aaPredicted RBP2.77□□□□□ -1.97
YMR050CYMR050C SSY5P47002 699 aa2.77□□□□□ -1.97
YMR050CYMR050C APS3P47064 194 aa2.77□□□□□ -1.97
YMR050CYMR050C BET4Q00618 327 aa2.77□□□□□ -1.97
YMR050CYMR050C SND1Q04007 877 aa2.77□□□□□ -1.97
YMR050CYMR050C POB3Q04636 552 aaKnown RBP2.77□□□□□ -1.97
YMR050CYMR050C GTT2Q12390 233 aa2.77□□□□□ -1.97
YMR050CYMR050C PNO1Q99216 274 aaKnown RBP2.77□□□□□ -1.97
YMR050CYMR050C MLP2P40457 1679 aa2.77□□□□□ -1.97
YMR050CYMR050C YMR084WA2P2R3 262 aa2.77□□□□□ -1.97
YMR050CYMR050C HIS1P00498 297 aaKnown RBP2.77□□□□□ -1.97
YMR050CYMR050C RPS8AP0CX39 200 aaKnown RBP2.77□□□□□ -1.97
YMR050CYMR050C RPS8BP0CX40 200 aaKnown RBP2.77□□□□□ -1.97
YMR050CYMR050C PHO8P11491 566 aa2.77□□□□□ -1.97
YMR050CYMR050C MSH2P25847 964 aa2.77□□□□□ -1.97
YMR050CYMR050C YKT6P36015 200 aaKnown RBP2.77□□□□□ -1.97
YMR050CYMR050C BYE1P36106 594 aa2.77□□□□□ -1.97
YMR050CYMR050C MMS4P38257 691 aa2.77□□□□□ -1.97
YMR050CYMR050C NDC80P40460 691 aa2.77□□□□□ -1.97
YMR050CYMR050C LYS5P50113 272 aa2.77□□□□□ -1.97
YMR050CYMR050C YNR021WP53723 404 aaKnown RBP2.77□□□□□ -1.97
YMR050CYMR050C VPS30Q02948 557 aa2.77□□□□□ -1.97
YMR050CYMR050C RVB1Q03940 463 aaKnown RBP2.77□□□□□ -1.97
YMR050CYMR050C KRE28Q04431 385 aa2.77□□□□□ -1.97
YMR050CYMR050C DIT2P21595 489 aa2.77□□□□□ -1.97
YMR050CYMR050C NFU1P32860 256 aa2.77□□□□□ -1.97
YMR050CYMR050C LIP5P32875 414 aa2.77□□□□□ -1.97
YMR050CYMR050C PTH2P34222 208 aa2.77□□□□□ -1.97
YMR050CYMR050C TVP38P36164 337 aa2.77□□□□□ -1.97
YMR050CYMR050C JNM1P36224 373 aa2.77□□□□□ -1.97
YMR050CYMR050C SIP5P40210 489 aaKnown RBP2.77□□□□□ -1.97
YMR050CYMR050C SEC27P41811 889 aaKnown RBP2.77□□□□□ -1.97
YMR050CYMR050C YGR237CP50089 785 aa2.77□□□□□ -1.97
YMR050CYMR050C SDT1P53078 280 aa2.77□□□□□ -1.97
YMR050CYMR050C YGR117CP53270 476 aa2.77□□□□□ -1.97
YMR050CYMR050C YNL143CP53908 130 aa2.77□□□□□ -1.97
YMR050CYMR050C EGD1Q02642 157 aaKnown RBP2.77□□□□□ -1.97
YMR050CYMR050C LEE1Q02799 301 aaKnown RBP2.77□□□□□ -1.97
YMR050CYMR050C LDB18Q07887 179 aa2.77□□□□□ -1.97
YMR050CYMR050C RGT2Q12300 763 aa2.77□□□□□ -1.97
YMR050CYMR050C CTF3Q12748 733 aa2.77□□□□□ -1.97
YMR050CYMR050C COX2P00410 251 aa2.77□□□□□ -1.97
YMR050CYMR050C NAT1P12945 854 aaKnown RBP2.77□□□□□ -1.97
YMR050CYMR050C RIT1P23796 513 aa2.77□□□□□ -1.97
YMR050CYMR050C RAD27P26793 382 aa2.77□□□□□ -1.97
YMR050CYMR050C CDC3P32457 520 aaKnown RBP2.77□□□□□ -1.97
YMR050CYMR050C SLA2P33338 968 aa2.77□□□□□ -1.97
YMR050CYMR050C ERT1P38140 529 aa2.77□□□□□ -1.97
YMR050CYMR050C PRS3P38689 320 aaKnown RBP2.77□□□□□ -1.97
YMR050CYMR050C RTC3P38804 111 aaPredicted RBP2.77□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 151.4 ms