RNA–Protein interactions for RNA: YMR025W

CSI1, Transcript of Subunit of the Cop9 signalosome, yeastyeast

Gene CSI1, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSI1YMR025W REV7P38927 245 aa5.59□□□□□ -1.51
CSI1YMR025W CCT7P42943 550 aaKnown RBP5.59□□□□□ -1.51
CSI1YMR025W ZDS1P50111 915 aaKnown RBP5.59□□□□□ -1.51
CSI1YMR025W YAP1802P53309 568 aa5.59□□□□□ -1.51
CSI1YMR025W TAF3Q12297 353 aa5.59□□□□□ -1.51
CSI1YMR025W NDC80P40460 691 aa5.58□□□□□ -1.52
CSI1YMR025W RTA1P53047 317 aa5.58□□□□□ -1.52
CSI1YMR025W SIR3P06701 978 aa5.57□□□□□ -1.52
CSI1YMR025W PER1P25625 357 aa5.57□□□□□ -1.52
CSI1YMR025W CCT3P39077 534 aaKnown RBP5.57□□□□□ -1.52
CSI1YMR025W TY4A-JP47023 414 aa5.57□□□□□ -1.52
CSI1YMR025W EMP70P32802 667 aa5.56□□□□□ -1.52
CSI1YMR025W SPC29P33419 253 aa5.56□□□□□ -1.52
CSI1YMR025W ECM1P39715 212 aa5.56□□□□□ -1.52
CSI1YMR025W HOF1Q05080 669 aa5.56□□□□□ -1.52
CSI1YMR025W THI7Q05998 598 aa5.56□□□□□ -1.52
CSI1YMR025W YKL033W-AQ86ZR7 236 aa5.56□□□□□ -1.52
CSI1YMR025W CAN1P04817 590 aa5.55□□□□□ -1.52
CSI1YMR025W PRP31P49704 494 aaPredicted RBP5.55□□□□□ -1.52
CSI1YMR025W PAN2P53010 1115 aaPredicted RBP5.55□□□□□ -1.52
CSI1YMR025W HUL5P53119 910 aa5.55□□□□□ -1.52
CSI1YMR025W YBP2P53169 641 aa5.55□□□□□ -1.52
CSI1YMR025W MTL1P53214 551 aa5.55□□□□□ -1.52
CSI1YMR025W APM1Q00776 475 aaPredicted RBP5.55□□□□□ -1.52
CSI1YMR025W YDR338CQ05497 695 aa5.55□□□□□ -1.52
CSI1YMR025W PYC1P11154 1178 aaKnown RBP5.54□□□□□ -1.52
CSI1YMR025W SPO11P23179 398 aa5.54□□□□□ -1.52
CSI1YMR025W SFB3P38810 929 aa5.54□□□□□ -1.52
CSI1YMR025W RSP5P39940 809 aaKnown RBP5.54□□□□□ -1.52
CSI1YMR025W ALY2P47029 1046 aa5.54□□□□□ -1.52
CSI1YMR025W AFT2Q08957 416 aa5.54□□□□□ -1.52
CSI1YMR025W MVD1P32377 396 aaKnown RBP5.53□□□□□ -1.52
CSI1YMR025W UBS1P38290 277 aa5.53□□□□□ -1.52
CSI1YMR025W FMO1P38866 432 aa5.53□□□□□ -1.52
CSI1YMR025W LYS9P38999 446 aa5.53□□□□□ -1.52
CSI1YMR025W ADE2P21264 571 aaKnown RBP5.52□□□□□ -1.53
CSI1YMR025W YHR112CP38716 378 aa5.52□□□□□ -1.53
CSI1YMR025W YJL049WP47048 450 aa5.52□□□□□ -1.53
CSI1YMR025W CTK1Q03957 528 aaKnown RBP5.52□□□□□ -1.53
CSI1YMR025W GLG1P36143 616 aa5.51□□□□□ -1.53
CSI1YMR025W HRB1P38922 454 aaKnown RBP RIP-Chip data5.51□□□□□ -1.53not detected
CSI1YMR025W YEL020CP39994 560 aa5.51□□□□□ -1.53
CSI1YMR025W ARG2P40360 574 aa5.51□□□□□ -1.53
CSI1YMR025W APL2P36000 726 aaPredicted RBP5.5□□□□□ -1.53
CSI1YMR025W BDH2P39713 417 aa5.5□□□□□ -1.53
CSI1YMR025W CTR1P49573 406 aa5.5□□□□□ -1.53
CSI1YMR025W GAL11P19659 1081 aa5.49□□□□□ -1.53
CSI1YMR025W NUP60P39705 539 aa5.49□□□□□ -1.53
CSI1YMR025W FHN1P53279 174 aa5.49□□□□□ -1.53
CSI1YMR025W ARG5,6Q01217 863 aa5.49□□□□□ -1.53
CSI1YMR025W RGC1Q06108 1083 aaKnown RBP5.49□□□□□ -1.53
CSI1YMR025W RPN13O13563 156 aa5.48□□□□□ -1.53
CSI1YMR025W PHO11P35842 467 aa5.48□□□□□ -1.53
CSI1YMR025W TRZ1P36159 838 aaPredicted RBP5.48□□□□□ -1.53
CSI1YMR025W PHO12P38693 467 aa5.48□□□□□ -1.53
CSI1YMR025W MLH3Q12083 715 aa5.48□□□□□ -1.53
CSI1YMR025W YLR149CQ99296 730 aa5.48□□□□□ -1.53
CSI1YMR025W HRP1Q99383 534 aaKnown RBP5.48□□□□□ -1.53
CSI1YMR025W ERG6P25087 383 aaKnown RBP5.47□□□□□ -1.53
CSI1YMR025W ATG4P53867 494 aa5.47□□□□□ -1.53
CSI1YMR025W ORC4P54791 529 aa5.47□□□□□ -1.53
CSI1YMR025W MRI1Q06489 411 aaKnown RBP5.46□□□□□ -1.54
CSI1YMR025W MCM21Q06675 368 aa5.46□□□□□ -1.54
CSI1YMR025W ICT1Q12385 394 aa5.46□□□□□ -1.54
CSI1YMR025W Q0142Q9ZZW4 58 aa5.46□□□□□ -1.54
CSI1YMR025W APT2P36973 181 aa5.45□□□□□ -1.54
CSI1YMR025W YFL052WP43551 465 aa5.45□□□□□ -1.54
CSI1YMR025W BNA2P47125 453 aa5.45□□□□□ -1.54
CSI1YMR025W UBC9P50623 157 aaPredicted RBP5.45□□□□□ -1.54
CSI1YMR025W YAP7Q08182 245 aa5.45□□□□□ -1.54
CSI1YMR025W MTC2P34246 357 aa5.44□□□□□ -1.54
CSI1YMR025W MCD4P36051 919 aa5.44□□□□□ -1.54
CSI1YMR025W GDH3P39708 457 aa5.44□□□□□ -1.54
CSI1YMR025W CCR4P31384 837 aaKnown RBP5.43□□□□□ -1.54
CSI1YMR025W ORC2P32833 620 aa5.43□□□□□ -1.54
CSI1YMR025W MIP6P38760 659 aaKnown RBP5.43□□□□□ -1.54
CSI1YMR025W GET2P40056 285 aa5.43□□□□□ -1.54
CSI1YMR025W THR1P17423 357 aaKnown RBP5.42□□□□□ -1.54
CSI1YMR025W PAC2P39937 518 aa5.42□□□□□ -1.54
CSI1YMR025W USV1Q12132 391 aa5.42□□□□□ -1.54
CSI1YMR025W ZRT2Q12436 422 aa5.42□□□□□ -1.54
CSI1YMR025W TMT1P32643 299 aa5.41□□□□□ -1.54
CSI1YMR025W NPY1P53164 384 aa5.41□□□□□ -1.54
CSI1YMR025W CDC53Q12018 815 aaKnown RBP5.41□□□□□ -1.54
CSI1YMR025W HOM2P13663 365 aaKnown RBP5.4□□□□□ -1.54
CSI1YMR025W RNR1P21524 888 aaKnown RBP5.4□□□□□ -1.54
CSI1YMR025W VPS34P22543 875 aa5.4□□□□□ -1.54
CSI1YMR025W CRP1P38845 465 aaKnown RBP5.4□□□□□ -1.54
CSI1YMR025W MAL11P53048 616 aa5.4□□□□□ -1.54
CSI1YMR025W HMO1Q03973 246 aaKnown RBP5.4□□□□□ -1.54
CSI1YMR025W SET3P36124 751 aa5.39□□□□□ -1.55
CSI1YMR025W GLO1P50107 326 aa5.39□□□□□ -1.55
CSI1YMR025W NSE3Q05541 303 aa5.39□□□□□ -1.55
CSI1YMR025W FUB1P25659 250 aa5.38□□□□□ -1.55
CSI1YMR025W STO1P34160 861 aaKnown RBP5.38□□□□□ -1.55
CSI1YMR025W YKR051WP36142 418 aa5.38□□□□□ -1.55
CSI1YMR025W MUP3P38734 546 aa5.38□□□□□ -1.55
CSI1YMR025W RPN10P38886 268 aaKnown RBP5.38□□□□□ -1.55
CSI1YMR025W MRK1P50873 501 aa5.38□□□□□ -1.55
CSI1YMR025W NOP7P53261 605 aaKnown RBP5.38□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 47.8 ms