RNA–Protein interactions for RNA: YLR457C

NBP1, Transcript of Spindle pole body (SPB) component, yeast

Gene NBP1, Length 960 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NBP1	YLR457C	MSH2	P25847	964 aa		4.99	□□□□□ -1.61
NBP1	YLR457C	HIS7	P33734	552 aa	Known RBP	4.99	□□□□□ -1.61
NBP1	YLR457C	SPC42	P36094	363 aa		4.99	□□□□□ -1.61
NBP1	YLR457C	QRI1	P43123	477 aa	Known RBP	4.99	□□□□□ -1.61
NBP1	YLR457C	YFL052W	P43551	465 aa		4.99	□□□□□ -1.61
NBP1	YLR457C	NPY1	P53164	384 aa		4.99	□□□□□ -1.61
NBP1	YLR457C	ADE2	P21264	571 aa	Known RBP	4.98	□□□□□ -1.61
NBP1	YLR457C	GSY1	P23337	708 aa		4.98	□□□□□ -1.61
NBP1	YLR457C	PEX6	P33760	1030 aa		4.98	□□□□□ -1.61
NBP1	YLR457C	PCL5	P38794	229 aa		4.98	□□□□□ -1.61
NBP1	YLR457C	SDS3	P40505	327 aa		4.98	□□□□□ -1.61
NBP1	YLR457C	BAP3	P41815	604 aa		4.98	□□□□□ -1.61
NBP1	YLR457C	YBP2	P53169	641 aa		4.98	□□□□□ -1.61
NBP1	YLR457C	GAD1	Q04792	585 aa		4.98	□□□□□ -1.61
NBP1	YLR457C	ATG11	Q12527	1178 aa		4.98	□□□□□ -1.61
NBP1	YLR457C	SRD1	P09007	221 aa		4.97	□□□□□ -1.61
NBP1	YLR457C	YKR051W	P36142	418 aa		4.97	□□□□□ -1.61
NBP1	YLR457C	YHR112C	P38716	378 aa		4.97	□□□□□ -1.61
NBP1	YLR457C	ECM1	P39715	212 aa		4.97	□□□□□ -1.61
NBP1	YLR457C	STU2	P46675	888 aa		4.97	□□□□□ -1.61
NBP1	YLR457C	UBC11	P52492	156 aa		4.97	□□□□□ -1.61
NBP1	YLR457C	YTA7	P40340	1379 aa		4.96	□□□□□ -1.62
NBP1	YLR457C	MIP6	P38760	659 aa	Known RBP	4.96	□□□□□ -1.62
NBP1	YLR457C	MTL1	P53214	551 aa		4.96	□□□□□ -1.62
NBP1	YLR457C	RIA1	P53893	1110 aa		4.96	□□□□□ -1.62
NBP1	YLR457C	ORC4	P54791	529 aa		4.96	□□□□□ -1.62
NBP1	YLR457C	ARG5,6	Q01217	863 aa		4.96	□□□□□ -1.62
NBP1	YLR457C	UGO1	Q03327	502 aa		4.96	□□□□□ -1.62
NBP1	YLR457C	NHX1	Q04121	633 aa		4.96	□□□□□ -1.62
NBP1	YLR457C	MRH1	Q12117	320 aa	Predicted RBP	4.96	□□□□□ -1.62
NBP1	YLR457C	RAD18	P10862	487 aa		4.95	□□□□□ -1.62
NBP1	YLR457C	ERG6	P25087	383 aa	Known RBP	4.95	□□□□□ -1.62
NBP1	YLR457C	HIR1	P32479	840 aa		4.95	□□□□□ -1.62
NBP1	YLR457C	HOG1	P32485	435 aa		4.95	□□□□□ -1.62
NBP1	YLR457C	LYS9	P38999	446 aa		4.95	□□□□□ -1.62
NBP1	YLR457C	FMP52	P40008	231 aa		4.95	□□□□□ -1.62
NBP1	YLR457C	UBC9	P50623	157 aa	Predicted RBP	4.95	□□□□□ -1.62
NBP1	YLR457C	RPN7	Q06103	429 aa	Known RBP	4.95	□□□□□ -1.62
NBP1	YLR457C	SGO1	Q08490	590 aa		4.95	□□□□□ -1.62
NBP1	YLR457C	APL2	P36000	726 aa	Predicted RBP	4.94	□□□□□ -1.62
NBP1	YLR457C	HSL7	P38274	827 aa		4.94	□□□□□ -1.62
NBP1	YLR457C	OSW7	P43611	510 aa		4.94	□□□□□ -1.62
NBP1	YLR457C	TEL2	P53038	688 aa		4.94	□□□□□ -1.62
NBP1	YLR457C	NTG2	Q08214	380 aa		4.94	□□□□□ -1.62
NBP1	YLR457C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	not detected
NBP1	YLR457C	TRZ1	P36159	838 aa	Predicted RBP	4.93	□□□□□ -1.62
NBP1	YLR457C	CBR1	P38626	284 aa	Known RBP	4.93	□□□□□ -1.62
NBP1	YLR457C	AIM14	P53109	570 aa		4.93	□□□□□ -1.62
NBP1	YLR457C	ARP4	P80428	489 aa		4.93	□□□□□ -1.62
NBP1	YLR457C	RGC1	Q06108	1083 aa	Known RBP	4.93	□□□□□ -1.62
NBP1	YLR457C	HRP1	Q99383	534 aa	Known RBP	4.93	□□□□□ -1.62
NBP1	YLR457C	MET6	P05694	767 aa	Known RBP	4.92	□□□□□ -1.62
NBP1	YLR457C	PCL2	P25693	308 aa		4.92	□□□□□ -1.62
NBP1	YLR457C	YKR018C	P36114	725 aa		4.92	□□□□□ -1.62
NBP1	YLR457C	FMO1	P38866	432 aa		4.92	□□□□□ -1.62
NBP1	YLR457C	CCT3	P39077	534 aa	Known RBP	4.92	□□□□□ -1.62
NBP1	YLR457C	LEE1	Q02799	301 aa	Known RBP	4.92	□□□□□ -1.62
NBP1	YLR457C	CTK1	Q03957	528 aa	Known RBP	4.92	□□□□□ -1.62
NBP1	YLR457C	POB3	Q04636	552 aa	Known RBP	4.92	□□□□□ -1.62
NBP1	YLR457C	ATG33	Q06485	197 aa		4.92	□□□□□ -1.62
NBP1	YLR457C	SUT2	Q12286	268 aa		4.92	□□□□□ -1.62
NBP1	YLR457C	SIR3	P06701	978 aa		4.91	□□□□□ -1.62
NBP1	YLR457C	REV7	P38927	245 aa		4.91	□□□□□ -1.62
NBP1	YLR457C	PAN2	P53010	1115 aa	Predicted RBP	4.91	□□□□□ -1.62
NBP1	YLR457C	PCL10	P53124	433 aa		4.91	□□□□□ -1.62
NBP1	YLR457C	SSL2	Q00578	843 aa		4.91	□□□□□ -1.62
NBP1	YLR457C	MCM21	Q06675	368 aa		4.91	□□□□□ -1.62
NBP1	YLR457C	HMG1	P12683	1054 aa		4.9	□□□□□ -1.63
NBP1	YLR457C	MVD1	P32377	396 aa	Known RBP	4.9	□□□□□ -1.63
NBP1	YLR457C	YPT53	P36019	220 aa		4.9	□□□□□ -1.63
NBP1	YLR457C	APT2	P36973	181 aa		4.9	□□□□□ -1.63
NBP1	YLR457C	SFB3	P38810	929 aa		4.9	□□□□□ -1.63
NBP1	YLR457C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.63	not detected
NBP1	YLR457C	NUP60	P39705	539 aa		4.9	□□□□□ -1.63
NBP1	YLR457C	FPR4	Q06205	392 aa	Predicted RBP	4.9	□□□□□ -1.63
NBP1	YLR457C	YKL033W-A	Q86ZR7	236 aa		4.9	□□□□□ -1.63
NBP1	YLR457C	SFL1	P20134	766 aa		4.89	□□□□□ -1.63
NBP1	YLR457C	RNR1	P21524	888 aa	Known RBP	4.89	□□□□□ -1.63
NBP1	YLR457C	KIN3	P22209	435 aa		4.89	□□□□□ -1.63
NBP1	YLR457C	MNN4	P36044	1178 aa		4.89	□□□□□ -1.63
NBP1	YLR457C	TDP1	P38319	544 aa		4.89	□□□□□ -1.63
NBP1	YLR457C	PCM1	P38628	557 aa	Known RBP	4.89	□□□□□ -1.63
NBP1	YLR457C	GET2	P40056	285 aa		4.89	□□□□□ -1.63
NBP1	YLR457C	DOT6	P40059	670 aa	Known RBP	4.89	□□□□□ -1.63
NBP1	YLR457C	VPS73	P53142	486 aa	Known RBP	4.89	□□□□□ -1.63
NBP1	YLR457C	YAP1802	P53309	568 aa		4.89	□□□□□ -1.63
NBP1	YLR457C	SMX3	P54999	86 aa	Predicted RBP	4.89	□□□□□ -1.63
NBP1	YLR457C	CCR4	P31384	837 aa	Known RBP	4.88	□□□□□ -1.63
NBP1	YLR457C	GID8	P40208	455 aa		4.88	□□□□□ -1.63
NBP1	YLR457C	BRE5	P53741	515 aa	Known RBP	4.88	□□□□□ -1.63
NBP1	YLR457C	REC102	Q02721	264 aa		4.88	□□□□□ -1.63
NBP1	YLR457C	HMO1	Q03973	246 aa	Known RBP	4.88	□□□□□ -1.63
NBP1	YLR457C	COG8	Q04632	607 aa		4.88	□□□□□ -1.63
NBP1	YLR457C	GIN4	Q12263	1142 aa		4.88	□□□□□ -1.63
NBP1	YLR457C	CDC43	P18898	376 aa		4.87	□□□□□ -1.63
NBP1	YLR457C	YEL1	P34225	687 aa		4.87	□□□□□ -1.63
NBP1	YLR457C	PHO11	P35842	467 aa		4.87	□□□□□ -1.63
NBP1	YLR457C	UBS1	P38290	277 aa		4.87	□□□□□ -1.63
NBP1	YLR457C	PHO12	P38693	467 aa		4.87	□□□□□ -1.63
NBP1	YLR457C	YNL195C	P40168	261 aa		4.87	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms