RNA–Protein interactions for RNA: YKR040C

YKR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YKR040C, Length 504 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YKR040CYKR040C YPR027CQ12079 277 aa12.52□□□□□ -0.41
YKR040CYKR040C GAL10P04397 699 aa12.51□□□□□ -0.41
YKR040CYKR040C MAS1P10507 462 aa12.51□□□□□ -0.41
YKR040CYKR040C ROX1P25042 368 aa12.51□□□□□ -0.41
YKR040CYKR040C PGS1P25578 521 aa12.51□□□□□ -0.41
YKR040CYKR040C YBR284WP38150 797 aa12.51□□□□□ -0.41
YKR040CYKR040C MIP6P38760 659 aaKnown RBP12.51□□□□□ -0.41
YKR040CYKR040C SAH1P39954 449 aaKnown RBP12.51□□□□□ -0.41
YKR040CYKR040C SSL2Q00578 843 aa12.51□□□□□ -0.41
YKR040CYKR040C WAR1Q03631 944 aa12.51□□□□□ -0.41
YKR040CYKR040C LAA1P39526 2014 aa12.5□□□□□ -0.41
YKR040CYKR040C SNF1P06782 633 aaKnown RBP12.5□□□□□ -0.41
YKR040CYKR040C CHS1P08004 1131 aa12.5□□□□□ -0.41
YKR040CYKR040C COX11P19516 300 aaKnown RBP12.5□□□□□ -0.41
YKR040CYKR040C PEX1P24004 1043 aa12.5□□□□□ -0.41
YKR040CYKR040C COQ8P27697 501 aa12.5□□□□□ -0.41
YKR040CYKR040C SLA2P33338 968 aa12.5□□□□□ -0.41
YKR040CYKR040C ADA2Q02336 434 aa12.5□□□□□ -0.41
YKR040CYKR040C CSR1Q06705 408 aaKnown RBP12.5□□□□□ -0.41
YKR040CYKR040C RNR1P21524 888 aaKnown RBP12.49□□□□□ -0.41
YKR040CYKR040C EFB1P32471 206 aaKnown RBP12.49□□□□□ -0.41
YKR040CYKR040C SAP190P36123 1033 aa12.49□□□□□ -0.41
YKR040CYKR040C RDH54P38086 958 aa12.49□□□□□ -0.41
YKR040CYKR040C SHE3P38272 425 aaKnown RBP12.49□□□□□ -0.41
YKR040CYKR040C RGD1P38339 666 aa12.49□□□□□ -0.41
YKR040CYKR040C TFG2P41896 400 aaPredicted RBP12.49□□□□□ -0.41
YKR040CYKR040C SBE2P42223 864 aaKnown RBP12.49□□□□□ -0.41
YKR040CYKR040C TPK1P06244 397 aa12.48□□□□□ -0.41
YKR040CYKR040C SCJ1P25303 377 aa12.48□□□□□ -0.41
YKR040CYKR040C MSH3P25336 1018 aa12.48□□□□□ -0.41
YKR040CYKR040C KDX1P36005 433 aa12.48□□□□□ -0.41
YKR040CYKR040C GEM1P39722 662 aa12.48□□□□□ -0.41
YKR040CYKR040C PPM1Q04081 328 aa12.48□□□□□ -0.41
YKR040CYKR040C TAF10Q12030 206 aa12.48□□□□□ -0.41
YKR040CYKR040C CWC2Q12046 339 aaPredicted RBP12.48□□□□□ -0.41
YKR040CYKR040C APM4Q99186 491 aa12.48□□□□□ -0.41
YKR040CYKR040C SPE1P08432 466 aa12.47□□□□□ -0.41
YKR040CYKR040C SPO11P23179 398 aa12.47□□□□□ -0.41
YKR040CYKR040C KIP1P28742 1111 aa12.47□□□□□ -0.41
YKR040CYKR040C CDC11P32458 415 aa12.47□□□□□ -0.41
YKR040CYKR040C FRE1P32791 686 aa12.47□□□□□ -0.41
YKR040CYKR040C SAF1P38352 637 aa12.47□□□□□ -0.41
YKR040CYKR040C MOB1P40484 314 aa12.47□□□□□ -0.41
YKR040CYKR040C TAF1P46677 1066 aa12.47□□□□□ -0.41
YKR040CYKR040C YJL045WP47052 634 aa12.47□□□□□ -0.41
YKR040CYKR040C RSC1P53236 928 aa12.47□□□□□ -0.41
YKR040CYKR040C MUB1Q03162 620 aa12.47□□□□□ -0.41
YKR040CYKR040C LEA1Q08963 238 aaPredicted RBP12.47□□□□□ -0.41
YKR040CYKR040C RPS6AP0CX37 236 aaKnown RBP12.46□□□□□ -0.41
YKR040CYKR040C RPS6BP0CX38 236 aaPredicted RBP12.46□□□□□ -0.41
YKR040CYKR040C GAC1P28006 793 aa12.46□□□□□ -0.41
YKR040CYKR040C PEP7P32609 515 aa12.46□□□□□ -0.41
YKR040CYKR040C LEO1P38439 464 aa12.46□□□□□ -0.41
YKR040CYKR040C PEX28P38848 579 aa12.46□□□□□ -0.41
YKR040CYKR040C TGL3P40308 642 aa12.46□□□□□ -0.41
YKR040CYKR040C DRN1P53255 507 aaKnown RBP12.46□□□□□ -0.41
YKR040CYKR040C ECM3Q99252 613 aa12.46□□□□□ -0.41
YKR040CYKR040C DAL2P25335 343 aa12.45□□□□□ -0.42
YKR040CYKR040C SEC65P29478 273 aa12.45□□□□□ -0.42
YKR040CYKR040C XRS2P33301 854 aa12.45□□□□□ -0.42
YKR040CYKR040C NIP100P33420 868 aa12.45□□□□□ -0.42
YKR040CYKR040C CSG2P35206 410 aa12.45□□□□□ -0.42
YKR040CYKR040C RKM3P38222 552 aa12.45□□□□□ -0.42
YKR040CYKR040C YJR054WP47114 497 aa12.45□□□□□ -0.42
YKR040CYKR040C MZM1Q03429 123 aaPredicted RBP12.45□□□□□ -0.42
YKR040CYKR040C HRT3Q12347 344 aa12.45□□□□□ -0.42
YKR040CYKR040C AI5_BETAQ9ZZX0 354 aa12.45□□□□□ -0.42
YKR040CYKR040C PDE1P22434 369 aa12.44□□□□□ -0.42
YKR040CYKR040C SMC1P32908 1225 aa12.44□□□□□ -0.42
YKR040CYKR040C TKL2P33315 681 aa12.44□□□□□ -0.42
YKR040CYKR040C SHM1P37292 490 aaPredicted RBP12.44□□□□□ -0.42
YKR040CYKR040C BFA1P47113 574 aa12.44□□□□□ -0.42
YKR040CYKR040C YNR014WP53719 212 aa12.44□□□□□ -0.42
YKR040CYKR040C GPM2Q12008 311 aa12.44□□□□□ -0.42
YKR040CYKR040C HMG2P12684 1045 aa12.43□□□□□ -0.42
YKR040CYKR040C APE1P14904 514 aa12.43□□□□□ -0.42
YKR040CYKR040C MRPL10P36520 322 aa12.43□□□□□ -0.42
YKR040CYKR040C SDS3P40505 327 aa12.43□□□□□ -0.42
YKR040CYKR040C ZAP1P47043 880 aa12.43□□□□□ -0.42
YKR040CYKR040C VPS25P47142 202 aa12.43□□□□□ -0.42
YKR040CYKR040C PRM6Q04705 352 aa12.43□□□□□ -0.42
YKR040CYKR040C VBA3P25594 458 aa12.42□□□□□ -0.42
YKR040CYKR040C VBA5P36172 582 aa12.42□□□□□ -0.42
YKR040CYKR040C DSE1P40077 573 aa12.42□□□□□ -0.42
YKR040CYKR040C ESBP6P53918 673 aa12.42□□□□□ -0.42
YKR040CYKR040C MAP1Q01662 387 aaKnown RBP RIP-Chip data12.42□□□□□ -0.42not detected
YKR040CYKR040C YML082WQ04533 649 aaKnown RBP12.42□□□□□ -0.42
YKR040CYKR040C YPR148CQ06523 435 aa12.42□□□□□ -0.42
YKR040CYKR040C YPR078CQ06813 372 aa12.42□□□□□ -0.42
YKR040CYKR040C TSR1Q07381 788 aaKnown RBP12.42□□□□□ -0.42
YKR040CYKR040C RAD59Q12223 238 aa12.42□□□□□ -0.42
YKR040CYKR040C RRD2Q12461 358 aa12.42□□□□□ -0.42
YKR040CYKR040C KNS1P32350 737 aaPredicted RBP12.41□□□□□ -0.42
YKR040CYKR040C NOP4P37838 685 aaKnown RBP12.41□□□□□ -0.42
YKR040CYKR040C SIF2P38262 535 aa12.41□□□□□ -0.42
YKR040CYKR040C HFM1P51979 1187 aa12.41□□□□□ -0.42
YKR040CYKR040C YGL036WP53185 909 aaPredicted RBP12.41□□□□□ -0.42
YKR040CYKR040C YNL011CP53980 444 aa12.41□□□□□ -0.42
YKR040CYKR040C SLG1P54867 378 aa12.41□□□□□ -0.42
YKR040CYKR040C SGO1Q08490 590 aa12.41□□□□□ -0.42
Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms