RNA–Protein interactions for RNA: YKL080W

VMA5, Transcript of Subunit C of the V1 peripheral membrane domain of V-ATPase, yeastyeast

Gene VMA5, Length 1,179 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA5YKL080W DAS1P47005 663 aa4.33□□□□□ -1.72
VMA5YKL080W LGE1Q02796 332 aaKnown RBP4.33□□□□□ -1.72
VMA5YKL080W STO1P34160 861 aaKnown RBP4.32□□□□□ -1.72
VMA5YKL080W YBR259WP38338 688 aa4.32□□□□□ -1.72
VMA5YKL080W CBR1P38626 284 aaKnown RBP4.32□□□□□ -1.72
VMA5YKL080W OSW7P43611 510 aa4.32□□□□□ -1.72
VMA5YKL080W PRP31P49704 494 aaPredicted RBP4.32□□□□□ -1.72
VMA5YKL080W NPY1P53164 384 aa4.32□□□□□ -1.72
VMA5YKL080W TEX1P53851 422 aaKnown RBP4.32□□□□□ -1.72
VMA5YKL080W GAD1Q04792 585 aa4.32□□□□□ -1.72
VMA5YKL080W YLR149CQ99296 730 aa4.32□□□□□ -1.72
VMA5YKL080W TOP1P04786 769 aa4.31□□□□□ -1.72
VMA5YKL080W LAT1P12695 482 aaKnown RBP4.31□□□□□ -1.72
VMA5YKL080W GSY1P23337 708 aa4.31□□□□□ -1.72
VMA5YKL080W MEF1P25039 761 aa4.31□□□□□ -1.72
VMA5YKL080W SIC1P38634 284 aa4.31□□□□□ -1.72
VMA5YKL080W BCD1P38772 366 aa4.31□□□□□ -1.72
VMA5YKL080W HOS4P40480 1083 aa4.31□□□□□ -1.72
VMA5YKL080W ORC4P54791 529 aa4.31□□□□□ -1.72
VMA5YKL080W MRH1Q12117 320 aaPredicted RBP4.31□□□□□ -1.72
VMA5YKL080W YLR125WQ12138 136 aa4.31□□□□□ -1.72
VMA5YKL080W CIT2P08679 460 aa4.3□□□□□ -1.72
VMA5YKL080W RAD18P10862 487 aa4.3□□□□□ -1.72
VMA5YKL080W SDS3P40505 327 aa4.3□□□□□ -1.72
VMA5YKL080W MDM12Q92328 271 aa4.3□□□□□ -1.72
VMA5YKL080W ADE2P21264 571 aaKnown RBP4.29□□□□□ -1.72
VMA5YKL080W YKR051WP36142 418 aa4.29□□□□□ -1.72
VMA5YKL080W CAF16P43569 289 aa4.29□□□□□ -1.72
VMA5YKL080W BNA2P47125 453 aa4.29□□□□□ -1.72
VMA5YKL080W UBC9P50623 157 aaPredicted RBP4.29□□□□□ -1.72
VMA5YKL080W MTL1P53214 551 aa4.29□□□□□ -1.72
VMA5YKL080W SNP1Q00916 300 aaPredicted RBP4.29□□□□□ -1.72
VMA5YKL080W CUE2P36075 443 aaKnown RBP4.28□□□□□ -1.72
VMA5YKL080W YHR112CP38716 378 aa4.28□□□□□ -1.72
VMA5YKL080W UBC11P52492 156 aa4.28□□□□□ -1.72
VMA5YKL080W RIA1P53893 1110 aa4.28□□□□□ -1.72
VMA5YKL080W RPN7Q06103 429 aaKnown RBP4.28□□□□□ -1.72
VMA5YKL080W SRD1P09007 221 aa4.27□□□□□ -1.73
VMA5YKL080W MSH2P25847 964 aa4.27□□□□□ -1.73
VMA5YKL080W MVD1P32377 396 aaKnown RBP4.27□□□□□ -1.73
VMA5YKL080W PEX6P33760 1030 aa4.27□□□□□ -1.73
VMA5YKL080W RRP14P36080 434 aaKnown RBP4.27□□□□□ -1.73
VMA5YKL080W FPR3P38911 411 aaKnown RBP4.27□□□□□ -1.73
VMA5YKL080W REV7P38927 245 aa4.27□□□□□ -1.73
VMA5YKL080W FMP52P40008 231 aa4.27□□□□□ -1.73
VMA5YKL080W CTK1Q03957 528 aaKnown RBP4.27□□□□□ -1.73
VMA5YKL080W NHX1Q04121 633 aa4.27□□□□□ -1.73
VMA5YKL080W CDC43P18898 376 aa4.26□□□□□ -1.73
VMA5YKL080W KIN3P22209 435 aa4.26□□□□□ -1.73
VMA5YKL080W ERG6P25087 383 aaKnown RBP4.26□□□□□ -1.73
VMA5YKL080W HIR1P32479 840 aa4.26□□□□□ -1.73
VMA5YKL080W HSL7P38274 827 aa4.26□□□□□ -1.73
VMA5YKL080W TDP1P38319 544 aa4.26□□□□□ -1.73
VMA5YKL080W SFB3P38810 929 aa4.26□□□□□ -1.73
VMA5YKL080W AIM14P53109 570 aa4.26□□□□□ -1.73
VMA5YKL080W SSL2Q00578 843 aa4.26□□□□□ -1.73
VMA5YKL080W SGO1Q08490 590 aa4.26□□□□□ -1.73
VMA5YKL080W MSL5Q12186 476 aaKnown RBP RIP-Chip data4.26□□□□□ -1.73not detected
VMA5YKL080W SUT2Q12286 268 aa4.26□□□□□ -1.73
VMA5YKL080W ATG11Q12527 1178 aa4.26□□□□□ -1.73
VMA5YKL080W MET6P05694 767 aaKnown RBP4.25□□□□□ -1.73
VMA5YKL080W MIH1P23748 554 aa4.25□□□□□ -1.73
VMA5YKL080W HOG1P32485 435 aa4.25□□□□□ -1.73
VMA5YKL080W MIP6P38760 659 aaKnown RBP4.25□□□□□ -1.73
VMA5YKL080W DOT6P40059 670 aaKnown RBP4.25□□□□□ -1.73
VMA5YKL080W PAN2P53010 1115 aaPredicted RBP4.25□□□□□ -1.73
VMA5YKL080W TEL2P53038 688 aa4.25□□□□□ -1.73
VMA5YKL080W COX18P53239 316 aa4.25□□□□□ -1.73
VMA5YKL080W ARG5,6Q01217 863 aa4.25□□□□□ -1.73
VMA5YKL080W RGC1Q06108 1083 aaKnown RBP4.25□□□□□ -1.73
VMA5YKL080W PEX2P32800 271 aa4.24□□□□□ -1.73
VMA5YKL080W APL2P36000 726 aaPredicted RBP4.24□□□□□ -1.73
VMA5YKL080W TRZ1P36159 838 aaPredicted RBP4.24□□□□□ -1.73
VMA5YKL080W APT2P36973 181 aa4.24□□□□□ -1.73
VMA5YKL080W FMO1P38866 432 aa4.24□□□□□ -1.73
VMA5YKL080W LYS9P38999 446 aa4.24□□□□□ -1.73
VMA5YKL080W CCT3P39077 534 aaKnown RBP4.24□□□□□ -1.73
VMA5YKL080W SNM1P40993 198 aa4.24□□□□□ -1.73
VMA5YKL080W BAP3P41815 604 aa4.24□□□□□ -1.73
VMA5YKL080W YNL195CP40168 261 aa4.23□□□□□ -1.73
VMA5YKL080W LEE1Q02799 301 aaKnown RBP4.23□□□□□ -1.73
VMA5YKL080W UGO1Q03327 502 aa4.23□□□□□ -1.73
VMA5YKL080W NTG2Q08214 380 aa4.23□□□□□ -1.73
VMA5YKL080W YKL033W-AQ86ZR7 236 aa4.23□□□□□ -1.73
VMA5YKL080W HRP1Q99383 534 aaKnown RBP4.23□□□□□ -1.73
VMA5YKL080W GFA1P14742 717 aaKnown RBP4.22□□□□□ -1.73
VMA5YKL080W PPZ2P33329 710 aa4.22□□□□□ -1.73
VMA5YKL080W HRB1P38922 454 aaKnown RBP RIP-Chip data4.22□□□□□ -1.73not detected
VMA5YKL080W NUP60P39705 539 aa4.22□□□□□ -1.73
VMA5YKL080W ECM1P39715 212 aa4.22□□□□□ -1.73
VMA5YKL080W NOP2P40991 618 aaKnown RBP4.22□□□□□ -1.73
VMA5YKL080W VPS73P53142 486 aaKnown RBP4.22□□□□□ -1.73
VMA5YKL080W YGL081WP53156 320 aa4.22□□□□□ -1.73
VMA5YKL080W ARP4P80428 489 aa4.22□□□□□ -1.73
VMA5YKL080W NDJ1Q12366 352 aa4.22□□□□□ -1.73
VMA5YKL080W HMG1P12683 1054 aa4.21□□□□□ -1.74
VMA5YKL080W RNR1P21524 888 aaKnown RBP4.21□□□□□ -1.74
VMA5YKL080W PPG1P32838 368 aa4.21□□□□□ -1.74
VMA5YKL080W MNN4P36044 1178 aa4.21□□□□□ -1.74
VMA5YKL080W YKR018CP36114 725 aa4.21□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms