RNA–Protein interactions for RNA: YJR036C

HUL4, Transcript of Protein with similarity to hect domain E3 ubiquitin-protein ligases, yeast

Gene HUL4, Length 2,679 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HUL4	YJR036C	TOF2	Q02208	771 aa		4.9	□□□□□ -1.63
HUL4	YJR036C	RRB1	Q04225	511 aa	Known RBP	4.9	□□□□□ -1.63
HUL4	YJR036C	GTB1	Q04924	702 aa		4.9	□□□□□ -1.63
HUL4	YJR036C	NOP6	Q07623	225 aa	Known RBP	4.9	□□□□□ -1.63
HUL4	YJR036C	STE50	P25344	346 aa		4.89	□□□□□ -1.63
HUL4	YJR036C	RSC6	P25632	483 aa		4.89	□□□□□ -1.63
HUL4	YJR036C	GYP6	P32806	458 aa		4.89	□□□□□ -1.63
HUL4	YJR036C	POL12	P38121	705 aa	Predicted RBP	4.89	□□□□□ -1.63
HUL4	YJR036C	YEL023C	P39992	682 aa		4.89	□□□□□ -1.63
HUL4	YJR036C	MRX1	P40050	688 aa		4.89	□□□□□ -1.63
HUL4	YJR036C	MKT1	P40850	830 aa	Known RBP	4.89	□□□□□ -1.63
HUL4	YJR036C	TOF1	P53840	1238 aa		4.89	□□□□□ -1.63
HUL4	YJR036C	TIF6	Q12522	245 aa	Known RBP	4.89	□□□□□ -1.63
HUL4	YJR036C	RMP1	Q12530	201 aa		4.89	□□□□□ -1.63
HUL4	YJR036C	ISN1	Q99312	450 aa		4.89	□□□□□ -1.63
HUL4	YJR036C	RAD18	P10862	487 aa		4.89	□□□□□ -1.63
HUL4	YJR036C	LAT1	P12695	482 aa	Known RBP	4.89	□□□□□ -1.63
HUL4	YJR036C	ADK2	P26364	225 aa		4.89	□□□□□ -1.63
HUL4	YJR036C	GPI10	P30777	616 aa		4.89	□□□□□ -1.63
HUL4	YJR036C	SLA1	P32790	1244 aa		4.89	□□□□□ -1.63
HUL4	YJR036C	LAS1	P36146	502 aa	Predicted RBP	4.89	□□□□□ -1.63
HUL4	YJR036C	CCZ1	P38273	704 aa		4.89	□□□□□ -1.63
HUL4	YJR036C	PAN5	P38787	379 aa		4.89	□□□□□ -1.63
HUL4	YJR036C	STN1	P38960	494 aa		4.89	□□□□□ -1.63
HUL4	YJR036C	YJL070C	P40361	888 aa		4.89	□□□□□ -1.63
HUL4	YJR036C	VID22	Q05934	901 aa		4.89	□□□□□ -1.63
HUL4	YJR036C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
HUL4	YJR036C	PEX15	Q08215	383 aa		4.89	□□□□□ -1.63
HUL4	YJR036C	APL4	Q12028	832 aa		4.89	□□□□□ -1.63
HUL4	YJR036C	SPE3	Q12074	293 aa	Known RBP	4.89	□□□□□ -1.63
HUL4	YJR036C	APC2	Q12440	853 aa		4.89	□□□□□ -1.63
HUL4	YJR036C	LEU1	P07264	779 aa	Known RBP	4.88	□□□□□ -1.63
HUL4	YJR036C	URA7	P28274	579 aa	Known RBP	4.88	□□□□□ -1.63
HUL4	YJR036C	YKU70	P32807	602 aa		4.88	□□□□□ -1.63
HUL4	YJR036C	VPS17	P32913	551 aa		4.88	□□□□□ -1.63
HUL4	YJR036C	TEP1	P53916	434 aa		4.88	□□□□□ -1.63
HUL4	YJR036C	PNG1	Q02890	363 aa		4.88	□□□□□ -1.63
HUL4	YJR036C	HOS3	Q02959	697 aa	Known RBP	4.88	□□□□□ -1.63
HUL4	YJR036C	YML119W	Q03208	357 aa		4.88	□□□□□ -1.63
HUL4	YJR036C	GGA1	Q06336	557 aa		4.88	□□□□□ -1.63
HUL4	YJR036C	RRT8	Q08219	342 aa		4.88	□□□□□ -1.63
HUL4	YJR036C	BUG1	Q12191	341 aa		4.88	□□□□□ -1.63
HUL4	YJR036C	ATP12	P22135	325 aa		4.88	□□□□□ -1.63
HUL4	YJR036C	VMA3	P25515	160 aa		4.88	□□□□□ -1.63
HUL4	YJR036C	NTG1	P31378	399 aa		4.88	□□□□□ -1.63
HUL4	YJR036C	FUN30	P31380	1131 aa		4.88	□□□□□ -1.63
HUL4	YJR036C	SMC1	P32908	1225 aa		4.88	□□□□□ -1.63
HUL4	YJR036C	RFC3	P38629	340 aa		4.88	□□□□□ -1.63
HUL4	YJR036C	RRM3	P38766	723 aa		4.88	□□□□□ -1.63
HUL4	YJR036C	TIF4631	P39935	952 aa	Known RBP	4.88	□□□□□ -1.63
HUL4	YJR036C	YER010C	P40011	234 aa		4.88	□□□□□ -1.63
HUL4	YJR036C	NTA1	P40354	457 aa		4.88	□□□□□ -1.63
HUL4	YJR036C	CAF16	P43569	289 aa		4.88	□□□□□ -1.63
HUL4	YJR036C	LOC1	P43586	204 aa	Predicted RBP	4.88	□□□□□ -1.63
HUL4	YJR036C	SAP155	P43612	1002 aa		4.88	□□□□□ -1.63
HUL4	YJR036C	RPA14	P50106	137 aa		4.88	□□□□□ -1.63
HUL4	YJR036C	TAD1	P53065	400 aa		4.88	□□□□□ -1.63
HUL4	YJR036C	YNL050C	P53952	270 aa		4.88	□□□□□ -1.63
HUL4	YJR036C	YMR111C	Q04461	462 aa	Predicted RBP	4.88	□□□□□ -1.63
HUL4	YJR036C	TGL5	Q12043	749 aa		4.88	□□□□□ -1.63
HUL4	YJR036C	PRT1	P06103	763 aa	Known RBP	4.87	□□□□□ -1.63
HUL4	YJR036C	MSD1	P15179	658 aa	Known RBP	4.87	□□□□□ -1.63
HUL4	YJR036C	CLC1	P17891	233 aa		4.87	□□□□□ -1.63
HUL4	YJR036C	SPS22	P25380	463 aa		4.87	□□□□□ -1.63
HUL4	YJR036C	SPB1	P25582	841 aa	Predicted RBP	4.87	□□□□□ -1.63
HUL4	YJR036C	DEP1	P31385	405 aa		4.87	□□□□□ -1.63
HUL4	YJR036C	DBF4	P32325	704 aa		4.87	□□□□□ -1.63
HUL4	YJR036C	KAP122	P32767	1081 aa		4.87	□□□□□ -1.63
HUL4	YJR036C	SUR1	P33300	382 aa		4.87	□□□□□ -1.63
HUL4	YJR036C	XRS2	P33301	854 aa		4.87	□□□□□ -1.63
HUL4	YJR036C	SEG2	P34250	1132 aa		4.87	□□□□□ -1.63
HUL4	YJR036C	MCM7	P38132	845 aa		4.87	□□□□□ -1.63
HUL4	YJR036C	CCT7	P42943	550 aa	Known RBP	4.87	□□□□□ -1.63
HUL4	YJR036C	PML39	Q03760	334 aa		4.87	□□□□□ -1.63
HUL4	YJR036C	KAP95	Q06142	861 aa	Known RBP	4.87	□□□□□ -1.63
HUL4	YJR036C	ATG33	Q06485	197 aa		4.87	□□□□□ -1.63
HUL4	YJR036C	HIM1	Q06674	414 aa		4.87	□□□□□ -1.63
HUL4	YJR036C	MDM36	Q06820	579 aa		4.87	□□□□□ -1.63
HUL4	YJR036C	PDH1	Q12428	516 aa	Known RBP	4.87	□□□□□ -1.63
HUL4	YJR036C	ENA1	P13587	1091 aa		4.87	□□□□□ -1.63
HUL4	YJR036C	YCL049C	P25577	312 aa		4.87	□□□□□ -1.63
HUL4	YJR036C	CWH43	P25618	953 aa		4.87	□□□□□ -1.63
HUL4	YJR036C	FBP26	P32604	452 aa		4.87	□□□□□ -1.63
HUL4	YJR036C	KDX1	P36005	433 aa		4.87	□□□□□ -1.63
HUL4	YJR036C	MCD4	P36051	919 aa		4.87	□□□□□ -1.63
HUL4	YJR036C	RGD1	P38339	666 aa		4.87	□□□□□ -1.63
HUL4	YJR036C	ZIM17	P42844	174 aa		4.87	□□□□□ -1.63
HUL4	YJR036C	SGF73	P53165	657 aa		4.87	□□□□□ -1.63
HUL4	YJR036C	ENA2	Q01896	1091 aa		4.87	□□□□□ -1.63
HUL4	YJR036C	YAP6	Q03935	383 aa		4.87	□□□□□ -1.63
HUL4	YJR036C	ECM22	Q05958	814 aa	Predicted RBP	4.87	□□□□□ -1.63
HUL4	YJR036C	PIB1	Q06651	286 aa		4.87	□□□□□ -1.63
HUL4	YJR036C	RTN2	Q12443	393 aa		4.87	□□□□□ -1.63
HUL4	YJR036C	ENA5	Q12691	1091 aa		4.87	□□□□□ -1.63
HUL4	YJR036C	YOL159C-A	Q3E769	90 aa		4.87	□□□□□ -1.63
HUL4	YJR036C	SGF29	P25554	259 aa		4.86	□□□□□ -1.63
HUL4	YJR036C	AFR1	P33304	620 aa		4.86	□□□□□ -1.63
HUL4	YJR036C	IFA38	P38286	347 aa		4.86	□□□□□ -1.63
HUL4	YJR036C	SPT8	P38915	602 aa		4.86	□□□□□ -1.63
HUL4	YJR036C	SMC2	P38989	1170 aa	Known RBP	4.86	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 68.6 ms