RNA–Protein interactions for RNA: YIL071C

PCI8, Transcript of Possible shared subunit of Cop9 signalosome (CSN) and eIF3, yeast

Gene PCI8, Length 1,335 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PCI8	YIL071C	LAT1	P12695	482 aa	Known RBP	4.69	□□□□□ -1.66
PCI8	YIL071C	DNF1	P32660	1571 aa		4.68	□□□□□ -1.66
PCI8	YIL071C	SMX3	P54999	86 aa	Predicted RBP	4.68	□□□□□ -1.66
PCI8	YIL071C	LCD1	Q04377	747 aa		4.68	□□□□□ -1.66
PCI8	YIL071C	REC104	P33323	182 aa		4.67	□□□□□ -1.66
PCI8	YIL071C	SCS3	P53012	380 aa		4.67	□□□□□ -1.66
PCI8	YIL071C	DUS1	P53759	423 aa	Known RBP	4.67	□□□□□ -1.66
PCI8	YIL071C	CWC24	P53769	259 aa		4.67	□□□□□ -1.66
PCI8	YIL071C	TAF3	Q12297	353 aa		4.67	□□□□□ -1.66
PCI8	YIL071C	MRP8	P35719	219 aa		4.66	□□□□□ -1.66
PCI8	YIL071C	BCD1	P38772	366 aa		4.66	□□□□□ -1.66
PCI8	YIL071C	TOK1	P40310	691 aa		4.66	□□□□□ -1.66
PCI8	YIL071C	MUS81	Q04149	632 aa	Predicted RBP	4.66	□□□□□ -1.66
PCI8	YIL071C	SSM4	P40318	1319 aa		4.65	□□□□□ -1.67
PCI8	YIL071C	SCT1	P32784	759 aa		4.65	□□□□□ -1.67
PCI8	YIL071C	ERT1	P38140	529 aa		4.65	□□□□□ -1.67
PCI8	YIL071C	YEL020C	P39994	560 aa		4.65	□□□□□ -1.67
PCI8	YIL071C	GAT1	P43574	510 aa		4.65	□□□□□ -1.67
PCI8	YIL071C	YAP1802	P53309	568 aa		4.65	□□□□□ -1.67
PCI8	YIL071C	YLR415C	O13578	112 aa		4.64	□□□□□ -1.67
PCI8	YIL071C	PBY1	P38254	753 aa		4.64	□□□□□ -1.67
PCI8	YIL071C	BUL2	Q03758	920 aa	Known RBP	4.64	□□□□□ -1.67
PCI8	YIL071C	HAL9	Q12180	1030 aa		4.64	□□□□□ -1.67
PCI8	YIL071C	YRF1-1	P0CX20	1796 aa		4.64	□□□□□ -1.67
PCI8	YIL071C	YRF1-5	P0CX21	1796 aa		4.64	□□□□□ -1.67
PCI8	YIL071C	YRF1-8	P0CX22	1796 aa		4.64	□□□□□ -1.67
PCI8	YIL071C	HOM2	P13663	365 aa	Known RBP	4.63	□□□□□ -1.67
PCI8	YIL071C	SAK1	P38990	1142 aa		4.63	□□□□□ -1.67
PCI8	YIL071C	RIM13	Q03792	727 aa		4.63	□□□□□ -1.67
PCI8	YIL071C	OPI10	Q08202	246 aa		4.63	□□□□□ -1.67
PCI8	YIL071C	GEA2	P39993	1459 aa	Known RBP	4.62	□□□□□ -1.67
PCI8	YIL071C	CYS3	P31373	394 aa	Known RBP	4.62	□□□□□ -1.67
PCI8	YIL071C	EMP70	P32802	667 aa		4.62	□□□□□ -1.67
PCI8	YIL071C	NDC80	P40460	691 aa		4.62	□□□□□ -1.67
PCI8	YIL071C	HOS4	P40480	1083 aa		4.62	□□□□□ -1.67
PCI8	YIL071C	CCT7	P42943	550 aa	Known RBP	4.62	□□□□□ -1.67
PCI8	YIL071C	UBC11	P52492	156 aa		4.62	□□□□□ -1.67
PCI8	YIL071C	SEG1	Q04279	960 aa		4.62	□□□□□ -1.67
PCI8	YIL071C	ASM4	Q05166	528 aa		4.62	□□□□□ -1.67
PCI8	YIL071C	ATG11	Q12527	1178 aa		4.62	□□□□□ -1.67
PCI8	YIL071C	PDR10	P51533	1564 aa		4.61	□□□□□ -1.67
PCI8	YIL071C	PRP9	P19736	530 aa	Known RBP	4.61	□□□□□ -1.67
PCI8	YIL071C	REV7	P38927	245 aa		4.61	□□□□□ -1.67
PCI8	YIL071C	MAD1	P40957	749 aa		4.61	□□□□□ -1.67
PCI8	YIL071C	SSY5	P47002	699 aa		4.61	□□□□□ -1.67
PCI8	YIL071C	TGL5	Q12043	749 aa		4.61	□□□□□ -1.67
PCI8	YIL071C	SPO14	P36126	1683 aa		4.61	□□□□□ -1.67
PCI8	YIL071C	VPS15	P22219	1454 aa		4.6	□□□□□ -1.67
PCI8	YIL071C	PRI2	P20457	528 aa		4.6	□□□□□ -1.67
PCI8	YIL071C	NAP1	P25293	417 aa	Known RBP	4.6	□□□□□ -1.67
PCI8	YIL071C	PFA3	P42836	336 aa		4.6	□□□□□ -1.67
PCI8	YIL071C	ARO1	P08566	1588 aa	Known RBP	4.6	□□□□□ -1.67
PCI8	YIL071C	PDR12	Q02785	1511 aa		4.59	□□□□□ -1.67
PCI8	YIL071C	VPS34	P22543	875 aa		4.59	□□□□□ -1.67
PCI8	YIL071C	YKL069W	P36088	180 aa		4.59	□□□□□ -1.67
PCI8	YIL071C	BDH2	P39713	417 aa		4.59	□□□□□ -1.67
PCI8	YIL071C	IRR1	P40541	1150 aa		4.59	□□□□□ -1.67
PCI8	YIL071C	NOG2	P53742	486 aa	Known RBP	4.59	□□□□□ -1.67
PCI8	YIL071C	RSC3	Q06639	885 aa		4.59	□□□□□ -1.67
PCI8	YIL071C	YOR022C	Q12204	715 aa		4.59	□□□□□ -1.67
PCI8	YIL071C	GDB1	Q06625	1536 aa		4.59	□□□□□ -1.68
PCI8	YIL071C	PRC1	P00729	532 aa		4.58	□□□□□ -1.68
PCI8	YIL071C	PTP1	P25044	335 aa		4.58	□□□□□ -1.68
PCI8	YIL071C	CDC11	P32458	415 aa		4.58	□□□□□ -1.68
PCI8	YIL071C	HIR1	P32479	840 aa		4.58	□□□□□ -1.68
PCI8	YIL071C	GLG1	P36143	616 aa		4.58	□□□□□ -1.68
PCI8	YIL071C	SIC1	P38634	284 aa		4.58	□□□□□ -1.68
PCI8	YIL071C	CAT8	P39113	1433 aa		4.58	□□□□□ -1.68
PCI8	YIL071C	ARG2	P40360	574 aa		4.58	□□□□□ -1.68
PCI8	YIL071C	CTR1	P49573	406 aa		4.58	□□□□□ -1.68
PCI8	YIL071C	NUP159	P40477	1460 aa		4.57	□□□□□ -1.68
PCI8	YIL071C	HBS1	P32769	611 aa	Known RBP	4.57	□□□□□ -1.68
PCI8	YIL071C	NIT3	P49954	291 aa		4.57	□□□□□ -1.68
PCI8	YIL071C	GCN2	P15442	1659 aa		4.57	□□□□□ -1.68
PCI8	YIL071C	PYC1	P11154	1178 aa	Known RBP	4.56	□□□□□ -1.68
PCI8	YIL071C	YUR1	P26725	428 aa		4.56	□□□□□ -1.68
PCI8	YIL071C	PAC2	P39937	518 aa		4.56	□□□□□ -1.68
PCI8	YIL071C	YPR071W	Q12346	211 aa		4.56	□□□□□ -1.68
PCI8	YIL071C	BNA3	P47039	444 aa	Known RBP	4.55	□□□□□ -1.68
PCI8	YIL071C	GAD1	Q04792	585 aa		4.55	□□□□□ -1.68
PCI8	YIL071C	ENV7	Q12003	364 aa		4.55	□□□□□ -1.68
PCI8	YIL071C	PIN2	Q12057	282 aa		4.55	□□□□□ -1.68
PCI8	YIL071C	YKL033W-A	Q86ZR7	236 aa		4.55	□□□□□ -1.68
PCI8	YIL071C	SPC29	P33419	253 aa		4.54	□□□□□ -1.68
PCI8	YIL071C	YBR259W	P38338	688 aa		4.54	□□□□□ -1.68
PCI8	YIL071C	LTP1	P40347	161 aa		4.54	□□□□□ -1.68
PCI8	YIL071C	BAP3	P41815	604 aa		4.54	□□□□□ -1.68
PCI8	YIL071C	UBC9	P50623	157 aa	Predicted RBP	4.54	□□□□□ -1.68
PCI8	YIL071C	YML020W	Q03722	664 aa		4.54	□□□□□ -1.68
PCI8	YIL071C	RGT2	Q12300	763 aa		4.54	□□□□□ -1.68
PCI8	YIL071C	SIR3	P06701	978 aa		4.53	□□□□□ -1.68
PCI8	YIL071C	DAL7	P21826	554 aa		4.53	□□□□□ -1.68
PCI8	YIL071C	SAP190	P36123	1033 aa		4.53	□□□□□ -1.68
PCI8	YIL071C	CCT3	P39077	534 aa	Known RBP	4.53	□□□□□ -1.68
PCI8	YIL071C	OSW1	Q08692	278 aa		4.53	□□□□□ -1.68
PCI8	YIL071C	BUD3	P25558	1636 aa		4.53	□□□□□ -1.68
PCI8	YIL071C	TOP3	P13099	656 aa		4.52	□□□□□ -1.69
PCI8	YIL071C	YBR284W	P38150	797 aa		4.52	□□□□□ -1.69
PCI8	YIL071C	NET1	P47035	1189 aa		4.52	□□□□□ -1.69
PCI8	YIL071C	MRK1	P50873	501 aa		4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 28.9 ms