RNA–Protein interactions for RNA: YHR150W

PEX28, Transcript of Peroxisomal integral membrane peroxin, yeastyeast

Gene PEX28, Length 1,740 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX28YHR150W YDL206WQ12424 762 aa7.96□□□□□ -1.14
PEX28YHR150W YDR461C-AQ2V2P7 80 aa7.96□□□□□ -1.14
PEX28YHR150W PRP4P20053 465 aaKnown RBP7.95□□□□□ -1.14
PEX28YHR150W PKC1P24583 1151 aa7.95□□□□□ -1.14
PEX28YHR150W CBF2P32504 956 aa7.95□□□□□ -1.14
PEX28YHR150W MUD1P32605 298 aaKnown RBP7.95□□□□□ -1.14
PEX28YHR150W IXR1P33417 597 aa7.95□□□□□ -1.14
PEX28YHR150W TVP38P36164 337 aa7.95□□□□□ -1.14
PEX28YHR150W PCS60P38137 543 aaKnown RBP RIP-Chip data7.95□□□□□ -1.14 RIP-Chip
PEX28YHR150W HEK2P38199 381 aaKnown RBP RIP-Chip data7.95□□□□□ -1.14not detected
PEX28YHR150W VHC1P38329 1120 aa7.95□□□□□ -1.14
PEX28YHR150W MMS21P38632 267 aa7.95□□□□□ -1.14
PEX28YHR150W YIL089WP40500 205 aa7.95□□□□□ -1.14
PEX28YHR150W CLA4P48562 842 aa7.95□□□□□ -1.14
PEX28YHR150W CMS1Q07897 291 aaKnown RBP7.95□□□□□ -1.14
PEX28YHR150W OSW2Q12202 724 aa7.95□□□□□ -1.14
PEX28YHR150W RIB2Q12362 591 aaKnown RBP7.95□□□□□ -1.14
PEX28YHR150W SPO16P17122 198 aa7.95□□□□□ -1.14
PEX28YHR150W CAP1P28495 268 aaKnown RBP7.95□□□□□ -1.14
PEX28YHR150W SEC21P32074 935 aaKnown RBP7.95□□□□□ -1.14
PEX28YHR150W DBF4P32325 704 aa7.95□□□□□ -1.14
PEX28YHR150W RPC37P36121 282 aa7.95□□□□□ -1.14
PEX28YHR150W MSG5P38590 489 aa7.95□□□□□ -1.14
PEX28YHR150W SSP1P38871 571 aa7.95□□□□□ -1.14
PEX28YHR150W TDA10P42938 290 aa7.95□□□□□ -1.14
PEX28YHR150W VPS70P47161 811 aa7.95□□□□□ -1.14
PEX28YHR150W TAM41P53230 385 aa7.95□□□□□ -1.14
PEX28YHR150W YPL109CQ02981 657 aa7.95□□□□□ -1.14
PEX28YHR150W DUS4Q06063 367 aa7.95□□□□□ -1.14
PEX28YHR150W PUF4P25339 888 aaKnown RBP RIP-Chip data7.94□□□□□ -1.14not detected
PEX28YHR150W COT1P32798 439 aa7.94□□□□□ -1.14
PEX28YHR150W PIN4P34217 668 aaKnown RBP RIP-Chip data7.94□□□□□ -1.14not detected
PEX28YHR150W YBL055CP34220 418 aaPredicted RBP7.94□□□□□ -1.14
PEX28YHR150W VPS29P38759 282 aa7.94□□□□□ -1.14
PEX28YHR150W EAF5P39995 279 aa7.94□□□□□ -1.14
PEX28YHR150W HSH155P49955 971 aaKnown RBP7.94□□□□□ -1.14
PEX28YHR150W ZIP2P53061 704 aa7.94□□□□□ -1.14
PEX28YHR150W TPO2P53283 614 aa7.94□□□□□ -1.14
PEX28YHR150W GTR1Q00582 310 aa7.94□□□□□ -1.14
PEX28YHR150W YLR177WQ06251 628 aa7.94□□□□□ -1.14
PEX28YHR150W MSC6Q08818 692 aaKnown RBP7.94□□□□□ -1.14
PEX28YHR150W YLL058WQ12198 575 aa7.94□□□□□ -1.14
PEX28YHR150W DED1P06634 604 aaKnown RBP7.93□□□□□ -1.14
PEX28YHR150W PEP5P12868 1029 aa7.93□□□□□ -1.14
PEX28YHR150W CBF1P17106 351 aa7.93□□□□□ -1.14
PEX28YHR150W BAS1P22035 811 aa7.93□□□□□ -1.14
PEX28YHR150W PTC3P34221 468 aaKnown RBP7.93□□□□□ -1.14
PEX28YHR150W YTA12P40341 825 aa7.93□□□□□ -1.14
PEX28YHR150W PEX21P50091 288 aa7.93□□□□□ -1.14
PEX28YHR150W YGR111WP53265 400 aa7.93□□□□□ -1.14
PEX28YHR150W RTT102P53330 157 aa7.93□□□□□ -1.14
PEX28YHR150W SUB1P54000 292 aaKnown RBP7.93□□□□□ -1.14
PEX28YHR150W TBF1Q02457 562 aa7.93□□□□□ -1.14
PEX28YHR150W DON1Q05610 365 aa7.93□□□□□ -1.14
PEX28YHR150W DAL2P25335 343 aa7.92□□□□□ -1.14
PEX28YHR150W RAD5P32849 1169 aaPredicted RBP7.92□□□□□ -1.14
PEX28YHR150W YEL025CP39991 1188 aa7.92□□□□□ -1.14
PEX28YHR150W ASG1P40467 964 aa7.92□□□□□ -1.14
PEX28YHR150W ILM1P47155 203 aa7.92□□□□□ -1.14
PEX28YHR150W YJR142WP47173 342 aa7.92□□□□□ -1.14
PEX28YHR150W YDR090CQ03193 310 aa7.92□□□□□ -1.14
PEX28YHR150W YML119WQ03208 357 aa7.92□□□□□ -1.14
PEX28YHR150W VPS16Q03308 798 aa7.92□□□□□ -1.14
PEX28YHR150W ATG16Q03818 150 aa7.92□□□□□ -1.14
PEX28YHR150W SPC24Q04477 213 aa7.92□□□□□ -1.14
PEX28YHR150W YDR222WQ04925 415 aa7.92□□□□□ -1.14
PEX28YHR150W PUS1Q12211 544 aaKnown RBP7.92□□□□□ -1.14
PEX28YHR150W VAN1P23642 535 aa7.92□□□□□ -1.14
PEX28YHR150W OXP1P28273 1286 aa7.92□□□□□ -1.14
PEX28YHR150W TMA22P47089 198 aaPredicted RBP7.92□□□□□ -1.14
PEX28YHR150W RPS7BP48164 190 aaKnown RBP7.92□□□□□ -1.14
PEX28YHR150W PSP2P50109 593 aaKnown RBP7.92□□□□□ -1.14
PEX28YHR150W MDR1P53258 950 aa7.92□□□□□ -1.14
PEX28YHR150W RPL22BP56628 122 aaKnown RBP7.92□□□□□ -1.14
PEX28YHR150W SHR3Q02774 210 aa7.92□□□□□ -1.14
PEX28YHR150W ROD1Q02805 837 aa7.92□□□□□ -1.14
PEX28YHR150W TFB2Q02939 513 aa7.92□□□□□ -1.14
PEX28YHR150W RGA2Q06407 1009 aa7.92□□□□□ -1.14
PEX28YHR150W MAG2Q06436 670 aaKnown RBP7.92□□□□□ -1.14
PEX28YHR150W PUF3Q07807 879 aaKnown RBP RIP-Chip data7.92□□□□□ -1.14not detected
PEX28YHR150W VMA1P17255 1071 aaKnown RBP7.91□□□□□ -1.14
PEX28YHR150W IRE1P32361 1115 aa7.91□□□□□ -1.14
PEX28YHR150W NIP1P32497 812 aaKnown RBP7.91□□□□□ -1.14
PEX28YHR150W CCL1P37366 393 aa7.91□□□□□ -1.14
PEX28YHR150W YBP1P38315 674 aa7.91□□□□□ -1.14
PEX28YHR150W RIO2P40160 425 aaKnown RBP7.91□□□□□ -1.14
PEX28YHR150W YMR134WP40207 237 aa7.91□□□□□ -1.14
PEX28YHR150W DAS1P47005 663 aa7.91□□□□□ -1.14
PEX28YHR150W ACF4P47129 309 aa7.91□□□□□ -1.14
PEX28YHR150W ALR1Q08269 859 aa7.91□□□□□ -1.14
PEX28YHR150W IES4Q08561 116 aa7.91□□□□□ -1.14
PEX28YHR150W GCR1P07261 785 aa7.9□□□□□ -1.14
PEX28YHR150W VMA4P22203 233 aaKnown RBP7.9□□□□□ -1.14
PEX28YHR150W MVD1P32377 396 aaKnown RBP7.9□□□□□ -1.14
PEX28YHR150W PEX2P32800 271 aa7.9□□□□□ -1.14
PEX28YHR150W MRX3P38172 270 aa7.9□□□□□ -1.14
PEX28YHR150W NOG2P53742 486 aaKnown RBP7.9□□□□□ -1.14
PEX28YHR150W UFO1Q04511 668 aa7.9□□□□□ -1.14
PEX28YHR150W YMR321CQ04898 105 aa7.9□□□□□ -1.14
PEX28YHR150W COQ9Q05779 260 aa7.9□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 93.3 ms