RNA–Protein interactions for RNA: YGR143W

SKN1, Transcript of Protein involved in sphingolipid biosynthesis, yeastyeast

Gene SKN1, Length 2,316 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKN1YGR143W VTC2P43585 828 aa6.17□□□□□ -1.42
SKN1YGR143W TEL2P53038 688 aa6.17□□□□□ -1.42
SKN1YGR143W YGR016WP53209 190 aa6.17□□□□□ -1.42
SKN1YGR143W HAS1Q03532 505 aaKnown RBP6.17□□□□□ -1.42
SKN1YGR143W NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.17□□□□□ -1.42not detected
SKN1YGR143W CSI1Q04368 295 aa6.17□□□□□ -1.42
SKN1YGR143W RBA50Q04418 439 aa6.17□□□□□ -1.42
SKN1YGR143W COA4Q05809 96 aa6.17□□□□□ -1.42
SKN1YGR143W DAP2P18962 818 aa6.17□□□□□ -1.42
SKN1YGR143W GAP1P19145 602 aaPredicted RBP6.17□□□□□ -1.42
SKN1YGR143W RPC53P25441 422 aa6.17□□□□□ -1.42
SKN1YGR143W RPT1P33299 467 aaKnown RBP6.17□□□□□ -1.42
SKN1YGR143W MUD2P36084 527 aaKnown RBP6.17□□□□□ -1.42
SKN1YGR143W RIM11P38615 370 aa6.17□□□□□ -1.42
SKN1YGR143W CTM1P38818 585 aa6.17□□□□□ -1.42
SKN1YGR143W YER137CP40083 148 aaKnown RBP6.17□□□□□ -1.42
SKN1YGR143W SBE2P42223 864 aaKnown RBP6.17□□□□□ -1.42
SKN1YGR143W ALF1P53904 254 aa6.17□□□□□ -1.42
SKN1YGR143W EMI2Q04409 500 aaKnown RBP6.17□□□□□ -1.42
SKN1YGR143W COX20Q04935 205 aa6.17□□□□□ -1.42
SKN1YGR143W HRQ1Q05549 1077 aa6.17□□□□□ -1.42
SKN1YGR143W CRN1Q06440 651 aa6.17□□□□□ -1.42
SKN1YGR143W THS1P04801 734 aaKnown RBP6.16□□□□□ -1.42
SKN1YGR143W ARG81P05085 880 aa6.16□□□□□ -1.42
SKN1YGR143W SSD1P24276 1250 aaKnown RBP RIP-Chip data6.16□□□□□ -1.42not detected
SKN1YGR143W YME1P32795 747 aa6.16□□□□□ -1.42
SKN1YGR143W MRX3P38172 270 aa6.16□□□□□ -1.42
SKN1YGR143W TIF5P38431 405 aaKnown RBP6.16□□□□□ -1.42
SKN1YGR143W RRF1P38771 230 aa6.16□□□□□ -1.42
SKN1YGR143W CCT3P39077 534 aaKnown RBP6.16□□□□□ -1.42
SKN1YGR143W YER186CP40101 306 aa6.16□□□□□ -1.42
SKN1YGR143W QDR2P40474 542 aa6.16□□□□□ -1.42
SKN1YGR143W BNA6P43619 295 aa6.16□□□□□ -1.42
SKN1YGR143W NUP85P46673 744 aa6.16□□□□□ -1.42
SKN1YGR143W TRF5P48561 642 aaKnown RBP6.16□□□□□ -1.42
SKN1YGR143W YCS4Q06156 1176 aa6.16□□□□□ -1.42
SKN1YGR143W MCD1Q12158 566 aa6.16□□□□□ -1.42
SKN1YGR143W FOB1O13329 566 aa6.16□□□□□ -1.42
SKN1YGR143W TRP5P00931 707 aaKnown RBP6.16□□□□□ -1.42
SKN1YGR143W SBP1P10080 294 aaKnown RBP6.16□□□□□ -1.42
SKN1YGR143W CKA2P19454 339 aa6.16□□□□□ -1.42
SKN1YGR143W ACE2P21192 770 aa6.16□□□□□ -1.42
SKN1YGR143W PGS1P25578 521 aa6.16□□□□□ -1.42
SKN1YGR143W LOS1P33418 1100 aaPredicted RBP6.16□□□□□ -1.42
SKN1YGR143W YKL050CP35736 922 aa6.16□□□□□ -1.42
SKN1YGR143W FUI1P38196 639 aa6.16□□□□□ -1.42
SKN1YGR143W SWC5P38326 303 aa6.16□□□□□ -1.42
SKN1YGR143W PIK1P39104 1066 aa6.16□□□□□ -1.42
SKN1YGR143W ICP55P40051 511 aa6.16□□□□□ -1.42
SKN1YGR143W PCI8P40512 444 aa6.16□□□□□ -1.42
SKN1YGR143W POL32P47110 350 aa6.16□□□□□ -1.42
SKN1YGR143W SLU7Q02775 382 aaKnown RBP6.16□□□□□ -1.42
SKN1YGR143W YLR177WQ06251 628 aa6.16□□□□□ -1.42
SKN1YGR143W GAS5Q08193 484 aa6.16□□□□□ -1.42
SKN1YGR143W MSH5Q12175 901 aa6.16□□□□□ -1.42
SKN1YGR143W FIG2P25653 1609 aa6.16□□□□□ -1.42
SKN1YGR143W TRL1P09880 827 aaKnown RBP6.15□□□□□ -1.42
SKN1YGR143W NCP1P16603 691 aaKnown RBP6.15□□□□□ -1.42
SKN1YGR143W STO1P34160 861 aaKnown RBP6.15□□□□□ -1.42
SKN1YGR143W MRPL17P36528 281 aa6.15□□□□□ -1.42
SKN1YGR143W MSR1P38714 643 aa6.15□□□□□ -1.42
SKN1YGR143W SPL2P38839 148 aa6.15□□□□□ -1.42
SKN1YGR143W HOL1P53389 586 aa6.15□□□□□ -1.42
SKN1YGR143W RPT4P53549 437 aaKnown RBP6.15□□□□□ -1.42
SKN1YGR143W LAP3Q01532 483 aaKnown RBP RIP-Chip data6.15□□□□□ -1.42not detected
SKN1YGR143W YML082WQ04533 649 aaKnown RBP6.15□□□□□ -1.42
SKN1YGR143W YLR287CQ05881 355 aa6.15□□□□□ -1.42
SKN1YGR143W YLR278CQ05854 1341 aa6.15□□□□□ -1.43
SKN1YGR143W TUS1Q06412 1307 aa6.15□□□□□ -1.43
SKN1YGR143W UBA1P22515 1024 aaKnown RBP6.15□□□□□ -1.43
SKN1YGR143W PEX1P24004 1043 aa6.15□□□□□ -1.43
SKN1YGR143W HSP30P25619 332 aa6.15□□□□□ -1.43
SKN1YGR143W KRE2P27809 442 aa6.15□□□□□ -1.43
SKN1YGR143W NGR1P32831 672 aaKnown RBP6.15□□□□□ -1.43
SKN1YGR143W SDH8P38345 138 aa6.15□□□□□ -1.43
SKN1YGR143W HAL5P38970 855 aaKnown RBP6.15□□□□□ -1.43
SKN1YGR143W MRX1P40050 688 aa6.15□□□□□ -1.43
SKN1YGR143W ALA1P40825 983 aaKnown RBP6.15□□□□□ -1.43
SKN1YGR143W YGL176CP46945 554 aa6.15□□□□□ -1.43
SKN1YGR143W TFB3Q03290 321 aa6.15□□□□□ -1.43
SKN1YGR143W RVB1Q03940 463 aaKnown RBP6.15□□□□□ -1.43
SKN1YGR143W RRP17Q04031 235 aaPredicted RBP6.15□□□□□ -1.43
SKN1YGR143W RPN9Q04062 393 aaKnown RBP6.15□□□□□ -1.43
SKN1YGR143W THI3Q07471 609 aa6.15□□□□□ -1.43
SKN1YGR143W LOT6Q07923 191 aa6.15□□□□□ -1.43
SKN1YGR143W RSA1Q08932 381 aa6.15□□□□□ -1.43
SKN1YGR143W KIN2P13186 1147 aaKnown RBP6.14□□□□□ -1.43
SKN1YGR143W GLK1P17709 500 aaKnown RBP6.14□□□□□ -1.43
SKN1YGR143W DBF2P22204 572 aa6.14□□□□□ -1.43
SKN1YGR143W MCM3P24279 971 aaKnown RBP6.14□□□□□ -1.43
SKN1YGR143W BUD23P25627 275 aaPredicted RBP6.14□□□□□ -1.43
SKN1YGR143W HXT3P32466 567 aaKnown RBP6.14□□□□□ -1.43
SKN1YGR143W RRN6P32786 894 aa6.14□□□□□ -1.43
SKN1YGR143W SPP381P38282 291 aaPredicted RBP6.14□□□□□ -1.43
SKN1YGR143W DOT6P40059 670 aaKnown RBP6.14□□□□□ -1.43
SKN1YGR143W YJR061WP40355 935 aa6.14□□□□□ -1.43
SKN1YGR143W MNN11P46985 422 aaKnown RBP6.14□□□□□ -1.43
SKN1YGR143W PEF1P53238 335 aa6.14□□□□□ -1.43
SKN1YGR143W SLT2Q00772 484 aa6.14□□□□□ -1.43
SKN1YGR143W INA17Q02888 182 aa6.14□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 107.1 ms