RNA–Protein interactions for RNA: YGL213C

SKI8, Transcript of Ski complex component and WD-repeat protein, yeast

Gene SKI8, Length 1,194 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKI8	YGL213C	SKN7	P38889	622 aa		6.1	□□□□□ -1.43
SKI8	YGL213C	ORC4	P54791	529 aa		6.1	□□□□□ -1.43
SKI8	YGL213C	ECM38	Q05902	660 aa	Predicted RBP	6.1	□□□□□ -1.43
SKI8	YGL213C	YDL121C	Q07541	149 aa		6.1	□□□□□ -1.43
SKI8	YGL213C	YOR352W	Q08816	343 aa		6.1	□□□□□ -1.43
SKI8	YGL213C	LPX1	Q12405	387 aa	Known RBP	6.1	□□□□□ -1.43
SKI8	YGL213C	FBP1	P09201	348 aa		6.09	□□□□□ -1.43
SKI8	YGL213C	FAT1	P38225	669 aa		6.09	□□□□□ -1.43
SKI8	YGL213C	SSZ1	P38788	538 aa	Known RBP	6.09	□□□□□ -1.43
SKI8	YGL213C	YHR078W	P38799	552 aa		6.09	□□□□□ -1.43
SKI8	YGL213C	SAK1	P38990	1142 aa		6.09	□□□□□ -1.43
SKI8	YGL213C	SDP1	P40479	209 aa		6.09	□□□□□ -1.43
SKI8	YGL213C	HIS6	P40545	261 aa		6.09	□□□□□ -1.43
SKI8	YGL213C	YJR039W	P47107	1121 aa		6.09	□□□□□ -1.43
SKI8	YGL213C	ARP4	P80428	489 aa		6.09	□□□□□ -1.43
SKI8	YGL213C	MIP6	P38760	659 aa	Known RBP	6.08	□□□□□ -1.44
SKI8	YGL213C	CTF8	P38877	133 aa		6.08	□□□□□ -1.44
SKI8	YGL213C	PZF1	P39933	429 aa		6.08	□□□□□ -1.44
SKI8	YGL213C	IES5	P40060	125 aa		6.08	□□□□□ -1.44
SKI8	YGL213C	PAP2	P53632	584 aa	Known RBP	6.08	□□□□□ -1.44
SKI8	YGL213C	WHI4	Q07655	649 aa	Known RBP	6.08	□□□□□ -1.44
SKI8	YGL213C	RPP2A	P05319	106 aa	Known RBP	6.07	□□□□□ -1.44
SKI8	YGL213C	SED4	P25365	1065 aa		6.07	□□□□□ -1.44
SKI8	YGL213C	YKL222C	P35995	705 aa		6.07	□□□□□ -1.44
SKI8	YGL213C	GTF1	P53260	183 aa	Predicted RBP	6.07	□□□□□ -1.44
SKI8	YGL213C	HOL1	P53389	586 aa		6.07	□□□□□ -1.44
SKI8	YGL213C	TPO1	Q07824	586 aa		6.07	□□□□□ -1.44
SKI8	YGL213C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	6.07	□□□□□ -1.44	not detected
SKI8	YGL213C	SWI6	P09959	803 aa		6.06	□□□□□ -1.44
SKI8	YGL213C	YHL041W	P38730	149 aa		6.06	□□□□□ -1.44
SKI8	YGL213C	ETP1	P38748	585 aa	Known RBP	6.06	□□□□□ -1.44
SKI8	YGL213C	YHR202W	P38887	602 aa		6.06	□□□□□ -1.44
SKI8	YGL213C	ICP55	P40051	511 aa		6.06	□□□□□ -1.44
SKI8	YGL213C	BRE5	P53741	515 aa	Known RBP	6.06	□□□□□ -1.44
SKI8	YGL213C	YMR210W	Q03649	449 aa		6.06	□□□□□ -1.44
SKI8	YGL213C	GLN4	P13188	809 aa	Known RBP	6.05	□□□□□ -1.44
SKI8	YGL213C	RRP8	P38961	392 aa	Known RBP	6.05	□□□□□ -1.44
SKI8	YGL213C	YBP2	P53169	641 aa		6.05	□□□□□ -1.44
SKI8	YGL213C	ORC3	P54790	616 aa		6.05	□□□□□ -1.44
SKI8	YGL213C	ROT1	Q03691	256 aa		6.05	□□□□□ -1.44
SKI8	YGL213C	YLR407W	Q06070	228 aa		6.05	□□□□□ -1.44
SKI8	YGL213C	TRP3	P00937	484 aa		6.04	□□□□□ -1.44
SKI8	YGL213C	PHO81	P17442	1178 aa		6.04	□□□□□ -1.44
SKI8	YGL213C	ATP12	P22135	325 aa		6.04	□□□□□ -1.44
SKI8	YGL213C	AKL1	P38080	1108 aa	Known RBP	6.04	□□□□□ -1.44
SKI8	YGL213C	KTR4	P38131	464 aa		6.04	□□□□□ -1.44
SKI8	YGL213C	APN2	P38207	520 aa		6.04	□□□□□ -1.44
SKI8	YGL213C	BEM4	P39011	633 aa		6.04	□□□□□ -1.44
SKI8	YGL213C	VID28	P40547	921 aa		6.04	□□□□□ -1.44
SKI8	YGL213C	SET2	P46995	733 aa	Known RBP	6.04	□□□□□ -1.44
SKI8	YGL213C	CNM67	P53865	581 aa	Known RBP	6.04	□□□□□ -1.44
SKI8	YGL213C	NOP15	P53927	220 aa	Predicted RBP	6.04	□□□□□ -1.44
SKI8	YGL213C	MED7	Q08278	222 aa		6.04	□□□□□ -1.44
SKI8	YGL213C	UPC2	Q12151	913 aa		6.04	□□□□□ -1.44
SKI8	YGL213C	NGG1	P32494	702 aa		6.03	□□□□□ -1.44
SKI8	YGL213C	DUN1	P39009	513 aa		6.03	□□□□□ -1.44
SKI8	YGL213C	PFA3	P42836	336 aa		6.03	□□□□□ -1.44
SKI8	YGL213C	GCV2	P49095	1034 aa		6.03	□□□□□ -1.44
SKI8	YGL213C	LEE1	Q02799	301 aa	Known RBP	6.03	□□□□□ -1.44
SKI8	YGL213C	MUS81	Q04149	632 aa	Predicted RBP	6.03	□□□□□ -1.44
SKI8	YGL213C	ASM4	Q05166	528 aa		6.03	□□□□□ -1.44
SKI8	YGL213C	SGD1	Q06132	899 aa		6.03	□□□□□ -1.44
SKI8	YGL213C	ADY3	Q07732	790 aa		6.03	□□□□□ -1.44
SKI8	YGL213C	PUS1	Q12211	544 aa	Known RBP	6.03	□□□□□ -1.44
SKI8	YGL213C	SWM1	Q12379	170 aa		6.03	□□□□□ -1.44
SKI8	YGL213C	NKP1	Q12493	238 aa		6.03	□□□□□ -1.44
SKI8	YGL213C	DGR2	P32330	852 aa		6.02	□□□□□ -1.45
SKI8	YGL213C	TOS1	P38288	455 aa		6.02	□□□□□ -1.45
SKI8	YGL213C	SAW1	P39735	261 aa		6.02	□□□□□ -1.45
SKI8	YGL213C	VHR1	P40522	640 aa		6.02	□□□□□ -1.45
SKI8	YGL213C	URM1	P40554	99 aa	Predicted RBP	6.02	□□□□□ -1.45
SKI8	YGL213C	MET12	P46151	657 aa		6.02	□□□□□ -1.45
SKI8	YGL213C	SNO2	P53823	222 aa		6.02	□□□□□ -1.45
SKI8	YGL213C	PKH1	Q03407	766 aa		6.02	□□□□□ -1.45
SKI8	YGL213C	PLB2	Q03674	706 aa		6.02	□□□□□ -1.45
SKI8	YGL213C	OMS1	Q06668	471 aa		6.02	□□□□□ -1.45
SKI8	YGL213C	PSR2	Q07949	397 aa		6.02	□□□□□ -1.45
SKI8	YGL213C	CWC2	Q12046	339 aa	Predicted RBP	6.02	□□□□□ -1.45
SKI8	YGL213C	YOL114C	Q12322	202 aa		6.02	□□□□□ -1.45
SKI8	YGL213C	RPS17A	P02407	136 aa	Known RBP	6.01	□□□□□ -1.45
SKI8	YGL213C	RPS17B	P14127	136 aa	Known RBP	6.01	□□□□□ -1.45
SKI8	YGL213C	APA1	P16550	321 aa	Known RBP	6.01	□□□□□ -1.45
SKI8	YGL213C	YIL092W	P40497	633 aa		6.01	□□□□□ -1.45
SKI8	YGL213C	QRI7	P43122	407 aa		6.01	□□□□□ -1.45
SKI8	YGL213C	ASK10	P48361	1146 aa		6.01	□□□□□ -1.45
SKI8	YGL213C	PRP31	P49704	494 aa	Predicted RBP	6.01	□□□□□ -1.45
SKI8	YGL213C	ASI2	P53895	289 aa		6.01	□□□□□ -1.45
SKI8	YGL213C	TMA64	Q04600	565 aa	Known RBP	6.01	□□□□□ -1.45
SKI8	YGL213C	ISA1	Q07821	250 aa	Predicted RBP	6.01	□□□□□ -1.45
SKI8	YGL213C	NGL1	Q08213	363 aa	Known RBP	6.01	□□□□□ -1.45
SKI8	YGL213C	NUR1	Q12066	484 aa		6.01	□□□□□ -1.45
SKI8	YGL213C	HIS5	P07172	385 aa		6	□□□□□ -1.45
SKI8	YGL213C	MSS18	P08593	268 aa		6	□□□□□ -1.45
SKI8	YGL213C	IMG2	P25642	146 aa	Predicted RBP	6	□□□□□ -1.45
SKI8	YGL213C	DBF20	P32328	564 aa		6	□□□□□ -1.45
SKI8	YGL213C	YKR073C	P36153	106 aa		6	□□□□□ -1.45
SKI8	YGL213C	SRP68	P38687	599 aa	Known RBP	6	□□□□□ -1.45
SKI8	YGL213C	LAM1	P38851	1228 aa		6	□□□□□ -1.45
SKI8	YGL213C	VPS27	P40343	622 aa	Known RBP	6	□□□□□ -1.45
SKI8	YGL213C	EXG2	P52911	562 aa		6	□□□□□ -1.45

Retrieved 100 of 5,963 RNA–protein pairs in 78.5 ms