RNA–Protein interactions for RNA: YER088C-A

YER088C-A, Transcript of Dubious open reading frame, yeastyeast

Gene YER088C-A, Length 324 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YER088C-AYER088C-A ATG11Q12527 1178 aa2.44□□□□□ -2.02
YER088C-AYER088C-A CIT1P00890 479 aa2.43□□□□□ -2.02
YER088C-AYER088C-A ERR1P0CX10 437 aa2.43□□□□□ -2.02
YER088C-AYER088C-A ERR2P0CX11 437 aa2.43□□□□□ -2.02
YER088C-AYER088C-A URA1P28272 314 aaPredicted RBP2.43□□□□□ -2.02
YER088C-AYER088C-A RPL8BP29453 256 aaKnown RBP2.43□□□□□ -2.02
YER088C-AYER088C-A PPH3P32345 308 aa2.43□□□□□ -2.02
YER088C-AYER088C-A STE5P32917 917 aa2.43□□□□□ -2.02
YER088C-AYER088C-A PBY1P38254 753 aa2.43□□□□□ -2.02
YER088C-AYER088C-A CEP3P40969 608 aa2.43□□□□□ -2.02
YER088C-AYER088C-A BUD6P41697 788 aa2.43□□□□□ -2.02
YER088C-AYER088C-A TPO2P53283 614 aa2.43□□□□□ -2.02
YER088C-AYER088C-A YPL068CQ02749 293 aa2.43□□□□□ -2.02
YER088C-AYER088C-A SHE9Q04172 456 aa2.43□□□□□ -2.02
YER088C-AYER088C-A YDL124WQ07551 312 aaKnown RBP2.43□□□□□ -2.02
YER088C-AYER088C-A CAN1P04817 590 aa2.42□□□□□ -2.02
YER088C-AYER088C-A PYC1P11154 1178 aaKnown RBP2.42□□□□□ -2.02
YER088C-AYER088C-A SFP1P32432 683 aa2.42□□□□□ -2.02
YER088C-AYER088C-A HIR1P32479 840 aa2.42□□□□□ -2.02
YER088C-AYER088C-A YHR020WP38708 688 aaKnown RBP2.42□□□□□ -2.02
YER088C-AYER088C-A REV7P38927 245 aa2.42□□□□□ -2.02
YER088C-AYER088C-A MBP1P39678 833 aa2.42□□□□□ -2.02
YER088C-AYER088C-A PZF1P39933 429 aa2.42□□□□□ -2.02
YER088C-AYER088C-A HOS4P40480 1083 aa2.42□□□□□ -2.02
YER088C-AYER088C-A YJR142WP47173 342 aa2.42□□□□□ -2.02
YER088C-AYER088C-A CTR1P49573 406 aa2.42□□□□□ -2.02
YER088C-AYER088C-A UBC9P50623 157 aaPredicted RBP2.42□□□□□ -2.02
YER088C-AYER088C-A HDA1P53973 706 aa2.42□□□□□ -2.02
YER088C-AYER088C-A UTP14Q04500 899 aaKnown RBP2.42□□□□□ -2.02
YER088C-AYER088C-A ASM4Q05166 528 aa2.42□□□□□ -2.02
YER088C-AYER088C-A FMP25Q08023 583 aa2.42□□□□□ -2.02
YER088C-AYER088C-A RPS9AO13516 197 aaKnown RBP2.41□□□□□ -2.02
YER088C-AYER088C-A ADE8P04161 214 aa2.41□□□□□ -2.02
YER088C-AYER088C-A TOM70P07213 617 aaKnown RBP2.41□□□□□ -2.02
YER088C-AYER088C-A NOP1P15646 327 aaKnown RBP2.41□□□□□ -2.02
YER088C-AYER088C-A AFR1P33304 620 aa2.41□□□□□ -2.02
YER088C-AYER088C-A SPC29P33419 253 aa2.41□□□□□ -2.02
YER088C-AYER088C-A MUP3P38734 546 aa2.41□□□□□ -2.02
YER088C-AYER088C-A PFD1P46988 109 aa2.41□□□□□ -2.02
YER088C-AYER088C-A JSN1P47135 1091 aaKnown RBP RIP-Chip data2.41□□□□□ -2.02not detected
YER088C-AYER088C-A YDR306CQ06640 478 aa2.41□□□□□ -2.02
YER088C-AYER088C-A YLR415CO13578 112 aa2.4□□□□□ -2.03
YER088C-AYER088C-A SIR3P06701 978 aa2.4□□□□□ -2.03
YER088C-AYER088C-A AAR2P32357 355 aaPredicted RBP2.4□□□□□ -2.03
YER088C-AYER088C-A CDC11P32458 415 aa2.4□□□□□ -2.03
YER088C-AYER088C-A YBR284WP38150 797 aa2.4□□□□□ -2.03
YER088C-AYER088C-A CRP1P38845 465 aaKnown RBP2.4□□□□□ -2.03
YER088C-AYER088C-A DSS1P39112 969 aa2.4□□□□□ -2.03
YER088C-AYER088C-A YJR008WP47085 338 aa2.4□□□□□ -2.03
YER088C-AYER088C-A CCM1P48237 864 aaPredicted RBP2.4□□□□□ -2.03
YER088C-AYER088C-A DUS1P53759 423 aaKnown RBP2.4□□□□□ -2.03
YER088C-AYER088C-A MUS81Q04149 632 aaPredicted RBP2.4□□□□□ -2.03
YER088C-AYER088C-A ADR1P07248 1323 aa2.4□□□□□ -2.03
YER088C-AYER088C-A NUP145P49687 1317 aa2.4□□□□□ -2.03
YER088C-AYER088C-A SSB1P11484 613 aaKnown RBP2.39□□□□□ -2.03
YER088C-AYER088C-A NUP1P20676 1076 aa2.39□□□□□ -2.03
YER088C-AYER088C-A TOM20P35180 183 aa2.39□□□□□ -2.03
YER088C-AYER088C-A SIC1P38634 284 aa2.39□□□□□ -2.03
YER088C-AYER088C-A SIT1P39980 628 aa2.39□□□□□ -2.03
YER088C-AYER088C-A YEN1P40028 759 aa2.39□□□□□ -2.03
YER088C-AYER088C-A SSB2P40150 613 aaKnown RBP2.39□□□□□ -2.03
YER088C-AYER088C-A RTA1P53047 317 aa2.39□□□□□ -2.03
YER088C-AYER088C-A GIS2P53849 153 aaKnown RBP RIP-Chip data2.39□□□□□ -2.03not detected
YER088C-AYER088C-A TAF8Q03750 510 aa2.39□□□□□ -2.03
YER088C-AYER088C-A TGL5Q12043 749 aa2.39□□□□□ -2.03
YER088C-AYER088C-A YKL033W-AQ86ZR7 236 aa2.39□□□□□ -2.03
YER088C-AYER088C-A NOP14Q99207 810 aaKnown RBP2.39□□□□□ -2.03
YER088C-AYER088C-A SCT1P32784 759 aa2.38□□□□□ -2.03
YER088C-AYER088C-A BET3P36149 193 aa2.38□□□□□ -2.03
YER088C-AYER088C-A UBS1P38290 277 aa2.38□□□□□ -2.03
YER088C-AYER088C-A CCT3P39077 534 aaKnown RBP2.38□□□□□ -2.03
YER088C-AYER088C-A BAP3P41815 604 aa2.38□□□□□ -2.03
YER088C-AYER088C-A HLJ1P48353 224 aa2.38□□□□□ -2.03
YER088C-AYER088C-A YGL081WP53156 320 aa2.38□□□□□ -2.03
YER088C-AYER088C-A UTP8P53276 713 aaKnown RBP2.38□□□□□ -2.03
YER088C-AYER088C-A NTG2Q08214 380 aa2.38□□□□□ -2.03
YER088C-AYER088C-A GEP3Q08622 556 aa2.38□□□□□ -2.03
YER088C-AYER088C-A PHR1P05066 565 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
YER088C-AYER088C-A GSY1P23337 708 aa2.37□□□□□ -2.03
YER088C-AYER088C-A CCR4P31384 837 aaKnown RBP2.37□□□□□ -2.03
YER088C-AYER088C-A GRX4P32642 244 aa2.37□□□□□ -2.03
YER088C-AYER088C-A YRO2P38079 344 aa2.37□□□□□ -2.03
YER088C-AYER088C-A PFA3P42836 336 aa2.37□□□□□ -2.03
YER088C-AYER088C-A DNM1P54861 757 aa2.37□□□□□ -2.03
YER088C-AYER088C-A STP1Q00947 519 aa2.37□□□□□ -2.03
YER088C-AYER088C-A TFB2Q02939 513 aa2.37□□□□□ -2.03
YER088C-AYER088C-A HAL9Q12180 1030 aa2.37□□□□□ -2.03
YER088C-AYER088C-A YPR071WQ12346 211 aa2.37□□□□□ -2.03
YER088C-AYER088C-A HBN1Q96VH4 193 aa2.37□□□□□ -2.03
YER088C-AYER088C-A TOP3P13099 656 aa2.36□□□□□ -2.03
YER088C-AYER088C-A MSD1P15179 658 aaKnown RBP2.36□□□□□ -2.03
YER088C-AYER088C-A APN1P22936 367 aa2.36□□□□□ -2.03
YER088C-AYER088C-A MSH2P25847 964 aa2.36□□□□□ -2.03
YER088C-AYER088C-A HBS1P32769 611 aaKnown RBP2.36□□□□□ -2.03
YER088C-AYER088C-A PEX6P33760 1030 aa2.36□□□□□ -2.03
YER088C-AYER088C-A SAK1P38990 1142 aa2.36□□□□□ -2.03
YER088C-AYER088C-A GDH3P39708 457 aa2.36□□□□□ -2.03
YER088C-AYER088C-A RTS3P53289 263 aa2.36□□□□□ -2.03
YER088C-AYER088C-A ATG4P53867 494 aa2.36□□□□□ -2.03
YER088C-AYER088C-A UGO1Q03327 502 aa2.36□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 65.9 ms