RNA–Protein interactions for RNA: YEL012W

UBC8, Transcript of Ubiquitin-conjugating enzyme that regulates gluconeogenesis, yeast

Gene UBC8, Length 657 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC8	YEL012W	MSH2	P25847	964 aa		5.07	□□□□□ -1.6
UBC8	YEL012W	THI4	P32318	326 aa		5.07	□□□□□ -1.6
UBC8	YEL012W	YSC84	P32793	468 aa		5.07	□□□□□ -1.6
UBC8	YEL012W	GRX7	P38068	203 aa		5.07	□□□□□ -1.6
UBC8	YEL012W	BAP2	P38084	609 aa		5.07	□□□□□ -1.6
UBC8	YEL012W	SLN1	P39928	1220 aa	Predicted RBP	5.07	□□□□□ -1.6
UBC8	YEL012W	SIT1	P39980	628 aa		5.07	□□□□□ -1.6
UBC8	YEL012W	HRQ1	Q05549	1077 aa		5.07	□□□□□ -1.6
UBC8	YEL012W	DUS4	Q06063	367 aa		5.07	□□□□□ -1.6
UBC8	YEL012W	PCL8	Q08966	492 aa		5.07	□□□□□ -1.6
UBC8	YEL012W	MDM20	Q12387	796 aa	Known RBP	5.07	□□□□□ -1.6
UBC8	YEL012W	UBR2	Q07963	1872 aa		5.07	□□□□□ -1.6
UBC8	YEL012W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	5.06	□□□□□ -1.6	not detected
UBC8	YEL012W	NAM7	P30771	971 aa	Known RBP	5.06	□□□□□ -1.6
UBC8	YEL012W	CDC12	P32468	407 aa	Known RBP	5.06	□□□□□ -1.6
UBC8	YEL012W	EUG1	P32474	517 aa		5.06	□□□□□ -1.6
UBC8	YEL012W	WHI3	P34761	661 aa	Known RBP	5.06	□□□□□ -1.6
UBC8	YEL012W	YBR284W	P38150	797 aa		5.06	□□□□□ -1.6
UBC8	YEL012W	GDH3	P39708	457 aa		5.06	□□□□□ -1.6
UBC8	YEL012W	TIF4631	P39935	952 aa	Known RBP	5.06	□□□□□ -1.6
UBC8	YEL012W	VAB2	P40003	282 aa		5.06	□□□□□ -1.6
UBC8	YEL012W	YJR142W	P47173	342 aa		5.06	□□□□□ -1.6
UBC8	YEL012W	YMR187C	Q03236	431 aa		5.06	□□□□□ -1.6
UBC8	YEL012W	POB3	Q04636	552 aa	Known RBP	5.06	□□□□□ -1.6
UBC8	YEL012W	DUS3	Q06053	668 aa	Known RBP	5.06	□□□□□ -1.6
UBC8	YEL012W	GIC2	Q06648	383 aa		5.06	□□□□□ -1.6
UBC8	YEL012W	SAM35	P14693	329 aa		5.05	□□□□□ -1.6
UBC8	YEL012W	MSD1	P15179	658 aa	Known RBP	5.05	□□□□□ -1.6
UBC8	YEL012W	PGM1	P33401	570 aa	Known RBP	5.05	□□□□□ -1.6
UBC8	YEL012W	PET10	P36139	283 aa		5.05	□□□□□ -1.6
UBC8	YEL012W	PIP2	P52960	996 aa		5.05	□□□□□ -1.6
UBC8	YEL012W	TNA1	P53322	534 aa		5.05	□□□□□ -1.6
UBC8	YEL012W	HOS3	Q02959	697 aa	Known RBP	5.05	□□□□□ -1.6
UBC8	YEL012W	YML037C	Q03703	340 aa		5.05	□□□□□ -1.6
UBC8	YEL012W	NTG2	Q08214	380 aa		5.05	□□□□□ -1.6
UBC8	YEL012W	KEL3	Q08979	651 aa	Predicted RBP	5.05	□□□□□ -1.6
UBC8	YEL012W	ACM1	Q08981	209 aa		5.05	□□□□□ -1.6
UBC8	YEL012W	YVC1	Q12324	675 aa		5.05	□□□□□ -1.6
UBC8	YEL012W	VMA2	P16140	517 aa	Known RBP	5.04	□□□□□ -1.6
UBC8	YEL012W	NPP1	P25353	742 aa		5.04	□□□□□ -1.6
UBC8	YEL012W	PRO1	P32264	428 aa		5.04	□□□□□ -1.6
UBC8	YEL012W	KTR3	P38130	404 aa	Predicted RBP	5.04	□□□□□ -1.6
UBC8	YEL012W	CST26	P38226	397 aa		5.04	□□□□□ -1.6
UBC8	YEL012W	SKN7	P38889	622 aa		5.04	□□□□□ -1.6
UBC8	YEL012W	GEM1	P39722	662 aa		5.04	□□□□□ -1.6
UBC8	YEL012W	NOP2	P40991	618 aa	Known RBP	5.04	□□□□□ -1.6
UBC8	YEL012W	UBP6	P43593	499 aa	Known RBP	5.04	□□□□□ -1.6
UBC8	YEL012W	MET7	Q08645	548 aa		5.04	□□□□□ -1.6
UBC8	YEL012W	AAR2	P32357	355 aa	Predicted RBP	5.03	□□□□□ -1.6
UBC8	YEL012W	KSP1	P38691	1029 aa	Known RBP	5.03	□□□□□ -1.6
UBC8	YEL012W	YHR131C	P38835	850 aa		5.03	□□□□□ -1.6
UBC8	YEL012W	AKR1	P39010	764 aa		5.03	□□□□□ -1.6
UBC8	YEL012W	NPP2	P39997	493 aa		5.03	□□□□□ -1.6
UBC8	YEL012W	AIM21	P40563	679 aa		5.03	□□□□□ -1.6
UBC8	YEL012W	SCS3	P53012	380 aa		5.03	□□□□□ -1.6
UBC8	YEL012W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	5.03	□□□□□ -1.6	not detected
UBC8	YEL012W	YPR071W	Q12346	211 aa		5.03	□□□□□ -1.6
UBC8	YEL012W	TUS1	Q06412	1307 aa		5.02	□□□□□ -1.61
UBC8	YEL012W	RPS19A	P07280	144 aa	Known RBP	5.02	□□□□□ -1.61
UBC8	YEL012W	RPS19B	P07281	144 aa	Predicted RBP	5.02	□□□□□ -1.61
UBC8	YEL012W	MEF1	P25039	761 aa		5.02	□□□□□ -1.61
UBC8	YEL012W	CDC11	P32458	415 aa		5.02	□□□□□ -1.61
UBC8	YEL012W	UTR4	P32626	227 aa		5.02	□□□□□ -1.61
UBC8	YEL012W	PIK1	P39104	1066 aa		5.02	□□□□□ -1.61
UBC8	YEL012W	YFL040W	P43562	540 aa		5.02	□□□□□ -1.61
UBC8	YEL012W	HSV2	P50079	448 aa	Predicted RBP	5.02	□□□□□ -1.61
UBC8	YEL012W	NOP14	Q99207	810 aa	Known RBP	5.02	□□□□□ -1.61
UBC8	YEL012W	BI4	P03879	638 aa		5.01	□□□□□ -1.61
UBC8	YEL012W	TOM70	P07213	617 aa	Known RBP	5.01	□□□□□ -1.61
UBC8	YEL012W	PIF1	P07271	859 aa		5.01	□□□□□ -1.61
UBC8	YEL012W	SAM2	P19358	384 aa	Known RBP	5.01	□□□□□ -1.61
UBC8	YEL012W	PRE8	P23639	250 aa		5.01	□□□□□ -1.61
UBC8	YEL012W	PER1	P25625	357 aa		5.01	□□□□□ -1.61
UBC8	YEL012W	RGT1	P32862	1170 aa		5.01	□□□□□ -1.61
UBC8	YEL012W	YRO2	P38079	344 aa		5.01	□□□□□ -1.61
UBC8	YEL012W	YHL012W	P38709	493 aa		5.01	□□□□□ -1.61
UBC8	YEL012W	PEX7	P39108	375 aa		5.01	□□□□□ -1.61
UBC8	YEL012W	YMR147W	P40218	223 aa	Known RBP	5.01	□□□□□ -1.61
UBC8	YEL012W	TOK1	P40310	691 aa		5.01	□□□□□ -1.61
UBC8	YEL012W	MMM1	P41800	426 aa		5.01	□□□□□ -1.61
UBC8	YEL012W	OYE3	P41816	400 aa	Predicted RBP	5.01	□□□□□ -1.61
UBC8	YEL012W	YGL039W	P53183	348 aa	Known RBP	5.01	□□□□□ -1.61
UBC8	YEL012W	TPO2	P53283	614 aa		5.01	□□□□□ -1.61
UBC8	YEL012W	YLL058W	Q12198	575 aa		5.01	□□□□□ -1.61
UBC8	YEL012W	MDM12	Q92328	271 aa		5.01	□□□□□ -1.61
UBC8	YEL012W	SAM1	P10659	382 aa	Known RBP	5	□□□□□ -1.61
UBC8	YEL012W	DAL5	P15365	543 aa		5	□□□□□ -1.61
UBC8	YEL012W	RPL8A	P17076	256 aa	Known RBP	5	□□□□□ -1.61
UBC8	YEL012W	CAD1	P24813	409 aa	Known RBP	5	□□□□□ -1.61
UBC8	YEL012W	SRO9	P25567	434 aa	Known RBP	5	□□□□□ -1.61
UBC8	YEL012W	DOM34	P33309	386 aa		5	□□□□□ -1.61
UBC8	YEL012W	SHP1	P34223	423 aa		5	□□□□□ -1.61
UBC8	YEL012W	SAF1	P38352	637 aa		5	□□□□□ -1.61
UBC8	YEL012W	TSL1	P38427	1098 aa	Known RBP	5	□□□□□ -1.61
UBC8	YEL012W	GIC1	P38785	314 aa		5	□□□□□ -1.61
UBC8	YEL012W	SAH1	P39954	449 aa	Known RBP	5	□□□□□ -1.61
UBC8	YEL012W	SKP2	P42843	763 aa		5	□□□□□ -1.61
UBC8	YEL012W	SPO1	P53541	631 aa		5	□□□□□ -1.61
UBC8	YEL012W	SRP1	Q02821	542 aa	Known RBP	5	□□□□□ -1.61
UBC8	YEL012W	FMP30	Q02883	468 aa		5	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 133.2 ms