RNA–Protein interactions for RNA: YDR425W

SNX41, Transcript of Sorting nexin, yeastyeast

Gene SNX41, Length 1,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNX41YDR425W RRP14P36080 434 aaKnown RBP3.18□□□□□ -1.9
SNX41YDR425W PPS1P38148 807 aa3.18□□□□□ -1.9
SNX41YDR425W YHL017WP38745 532 aa3.18□□□□□ -1.9
SNX41YDR425W RPN10P38886 268 aaKnown RBP3.18□□□□□ -1.9
SNX41YDR425W DAS1P47005 663 aa3.18□□□□□ -1.9
SNX41YDR425W TEX1P53851 422 aaKnown RBP3.18□□□□□ -1.9
SNX41YDR425W MUK1Q02866 612 aa3.18□□□□□ -1.9
SNX41YDR425W TMN2Q04562 672 aa3.18□□□□□ -1.9
SNX41YDR425W POB3Q04636 552 aaKnown RBP3.18□□□□□ -1.9
SNX41YDR425W CRR1Q05790 422 aa3.18□□□□□ -1.9
SNX41YDR425W CAB3P36076 571 aa3.18□□□□□ -1.9
SNX41YDR425W YKR018CP36114 725 aa3.18□□□□□ -1.9
SNX41YDR425W GID8P40208 455 aa3.18□□□□□ -1.9
SNX41YDR425W TIM44Q01852 431 aa3.18□□□□□ -1.9
SNX41YDR425W NHX1Q04121 633 aa3.18□□□□□ -1.9
SNX41YDR425W NTG2Q08214 380 aa3.18□□□□□ -1.9
SNX41YDR425W ADE2P21264 571 aaKnown RBP3.17□□□□□ -1.9
SNX41YDR425W PCL2P25693 308 aa3.17□□□□□ -1.9
SNX41YDR425W APL2P36000 726 aaPredicted RBP3.17□□□□□ -1.9
SNX41YDR425W EBP2P36049 427 aaKnown RBP3.17□□□□□ -1.9
SNX41YDR425W DSS1P39112 969 aa3.17□□□□□ -1.9
SNX41YDR425W QRI1P43123 477 aaKnown RBP3.17□□□□□ -1.9
SNX41YDR425W PRP31P49704 494 aaPredicted RBP3.17□□□□□ -1.9
SNX41YDR425W ARG5,6Q01217 863 aa3.17□□□□□ -1.9
SNX41YDR425W HMO1Q03973 246 aaKnown RBP3.17□□□□□ -1.9
SNX41YDR425W IRC13Q08630 104 aa3.17□□□□□ -1.9
SNX41YDR425W SIR3P06701 978 aa3.16□□□□□ -1.9
SNX41YDR425W HSL7P38274 827 aa3.16□□□□□ -1.9
SNX41YDR425W BCD1P38772 366 aa3.16□□□□□ -1.9
SNX41YDR425W FMP52P40008 231 aa3.16□□□□□ -1.9
SNX41YDR425W SDS3P40505 327 aa3.16□□□□□ -1.9
SNX41YDR425W YFL052WP43551 465 aa3.16□□□□□ -1.9
SNX41YDR425W UBA2P52488 636 aa3.16□□□□□ -1.9
SNX41YDR425W UBC11P52492 156 aa3.16□□□□□ -1.9
SNX41YDR425W NPY1P53164 384 aa3.16□□□□□ -1.9
SNX41YDR425W YBP2P53169 641 aa3.16□□□□□ -1.9
SNX41YDR425W RIA1P53893 1110 aa3.16□□□□□ -1.9
SNX41YDR425W GIS1Q03833 894 aa3.16□□□□□ -1.9
SNX41YDR425W GAD1Q04792 585 aa3.16□□□□□ -1.9
SNX41YDR425W MCM21Q06675 368 aa3.16□□□□□ -1.9
SNX41YDR425W MMS22Q06164 1454 aa3.16□□□□□ -1.9
SNX41YDR425W MET6P05694 767 aaKnown RBP3.16□□□□□ -1.9
SNX41YDR425W YKR051WP36142 418 aa3.16□□□□□ -1.9
SNX41YDR425W ENP1P38333 483 aaKnown RBP3.16□□□□□ -1.9
SNX41YDR425W YHR112CP38716 378 aa3.16□□□□□ -1.9
SNX41YDR425W ORC1P54784 914 aaPredicted RBP3.16□□□□□ -1.9
SNX41YDR425W ORC4P54791 529 aa3.16□□□□□ -1.9
SNX41YDR425W YMR206WQ03695 313 aa3.16□□□□□ -1.9
SNX41YDR425W HBT1Q07653 1046 aaKnown RBP3.16□□□□□ -1.9
SNX41YDR425W YLR001CQ07895 862 aa3.16□□□□□ -1.9
SNX41YDR425W SGO1Q08490 590 aa3.16□□□□□ -1.9
SNX41YDR425W Q0142Q9ZZW4 58 aa3.16□□□□□ -1.9
SNX41YDR425W HIR1P32479 840 aa3.15□□□□□ -1.91
SNX41YDR425W MTH1P35198 433 aa3.15□□□□□ -1.91
SNX41YDR425W PCM1P38628 557 aaKnown RBP3.15□□□□□ -1.91
SNX41YDR425W LYS9P38999 446 aa3.15□□□□□ -1.91
SNX41YDR425W PCL10P53124 433 aa3.15□□□□□ -1.91
SNX41YDR425W ALG12P53730 551 aa3.15□□□□□ -1.91
SNX41YDR425W ARP4P80428 489 aa3.15□□□□□ -1.91
SNX41YDR425W RPN7Q06103 429 aaKnown RBP3.15□□□□□ -1.91
SNX41YDR425W ATG33Q06485 197 aa3.15□□□□□ -1.91
SNX41YDR425W IRC10Q08118 586 aa3.15□□□□□ -1.91
SNX41YDR425W TRZ1P36159 838 aaPredicted RBP3.14□□□□□ -1.91
SNX41YDR425W CCT3P39077 534 aaKnown RBP3.14□□□□□ -1.91
SNX41YDR425W TEL2P53038 688 aa3.14□□□□□ -1.91
SNX41YDR425W YAP1802P53309 568 aa3.14□□□□□ -1.91
SNX41YDR425W RNH70P53331 553 aa3.14□□□□□ -1.91
SNX41YDR425W RAD18P10862 487 aa3.13□□□□□ -1.91
SNX41YDR425W HMG1P12683 1054 aa3.13□□□□□ -1.91
SNX41YDR425W CCR4P31384 837 aaKnown RBP3.13□□□□□ -1.91
SNX41YDR425W GND2P53319 492 aa3.13□□□□□ -1.91
SNX41YDR425W REC102Q02721 264 aa3.13□□□□□ -1.91
SNX41YDR425W MSL5Q12186 476 aaKnown RBP RIP-Chip data3.13□□□□□ -1.91not detected
SNX41YDR425W HRP1Q99383 534 aaKnown RBP3.13□□□□□ -1.91
SNX41YDR425W SFL1P20134 766 aa3.13□□□□□ -1.91
SNX41YDR425W ERG6P25087 383 aaKnown RBP3.13□□□□□ -1.91
SNX41YDR425W APT2P36973 181 aa3.13□□□□□ -1.91
SNX41YDR425W NMD2P38798 1089 aaKnown RBP3.13□□□□□ -1.91
SNX41YDR425W NUP60P39705 539 aa3.13□□□□□ -1.91
SNX41YDR425W STU2P46675 888 aa3.13□□□□□ -1.91
SNX41YDR425W UBC9P50623 157 aaPredicted RBP3.13□□□□□ -1.91
SNX41YDR425W MTL1P53214 551 aa3.13□□□□□ -1.91
SNX41YDR425W CTK1Q03957 528 aaKnown RBP3.13□□□□□ -1.91
SNX41YDR425W CHD1P32657 1468 aa3.13□□□□□ -1.91
SNX41YDR425W SPC42P36094 363 aa3.12□□□□□ -1.91
SNX41YDR425W SSZ1P38788 538 aaKnown RBP3.12□□□□□ -1.91
SNX41YDR425W FMO1P38866 432 aa3.12□□□□□ -1.91
SNX41YDR425W REV7P38927 245 aa3.12□□□□□ -1.91
SNX41YDR425W MGS1P40151 587 aa3.12□□□□□ -1.91
SNX41YDR425W YJR039WP47107 1121 aa3.12□□□□□ -1.91
SNX41YDR425W YNL193WP53870 558 aa3.12□□□□□ -1.91
SNX41YDR425W SMX3P54999 86 aaPredicted RBP3.12□□□□□ -1.91
SNX41YDR425W SSL2Q00578 843 aa3.12□□□□□ -1.91
SNX41YDR425W GIN4Q12263 1142 aa3.12□□□□□ -1.91
SNX41YDR425W HIS7P33734 552 aaKnown RBP3.11□□□□□ -1.91
SNX41YDR425W GET2P40056 285 aa3.11□□□□□ -1.91
SNX41YDR425W AIM14P53109 570 aa3.11□□□□□ -1.91
SNX41YDR425W BRE5P53741 515 aaKnown RBP3.11□□□□□ -1.91
SNX41YDR425W TFB2Q02939 513 aa3.11□□□□□ -1.91
SNX41YDR425W DCS2Q12123 353 aa3.11□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 118.1 ms