RNA–Protein interactions for RNA: YDR097C

MSH6, Transcript of Protein required for mismatch repair in mitosis and meiosis, yeastyeast

Gene MSH6, Length 3,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH6YDR097C GEX2P36173 615 aa2.06□□□□□ -2.08
MSH6YDR097C OAF1P39720 1047 aaPredicted RBP2.06□□□□□ -2.08
MSH6YDR097C NPP2P39997 493 aa2.06□□□□□ -2.08
MSH6YDR097C VPS27P40343 622 aaKnown RBP2.06□□□□□ -2.08
MSH6YDR097C VPS53P47061 822 aa2.06□□□□□ -2.08
MSH6YDR097C GTR1Q00582 310 aa2.06□□□□□ -2.08
MSH6YDR097C MAP1Q01662 387 aaKnown RBP RIP-Chip data2.06□□□□□ -2.08not detected
MSH6YDR097C LCD1Q04377 747 aa2.06□□□□□ -2.08
MSH6YDR097C RSB1Q08417 382 aa2.06□□□□□ -2.08
MSH6YDR097C ENV7Q12003 364 aa2.06□□□□□ -2.08
MSH6YDR097C DCS2Q12123 353 aa2.06□□□□□ -2.08
MSH6YDR097C NUP157P40064 1391 aaKnown RBP2.06□□□□□ -2.08
MSH6YDR097C PDR11P40550 1411 aa2.05□□□□□ -2.08
MSH6YDR097C CHS3P29465 1165 aa2.05□□□□□ -2.08
MSH6YDR097C RPC82P32349 654 aa2.05□□□□□ -2.08
MSH6YDR097C CBF2P32504 956 aa2.05□□□□□ -2.08
MSH6YDR097C PTH2P34222 208 aa2.05□□□□□ -2.08
MSH6YDR097C BRE2P43132 505 aa2.05□□□□□ -2.08
MSH6YDR097C JJJ3P47138 172 aa2.05□□□□□ -2.08
MSH6YDR097C CNM67P53865 581 aaKnown RBP2.05□□□□□ -2.08
MSH6YDR097C GCR2Q01722 534 aa2.05□□□□□ -2.08
MSH6YDR097C SRP1Q02821 542 aaKnown RBP2.05□□□□□ -2.08
MSH6YDR097C LCB5Q06147 687 aaKnown RBP2.05□□□□□ -2.08
MSH6YDR097C GUP2Q08929 609 aa2.05□□□□□ -2.08
MSH6YDR097C SEC65P29478 273 aa2.05□□□□□ -2.08
MSH6YDR097C HEM12P32347 362 aaPredicted RBP2.05□□□□□ -2.08
MSH6YDR097C MF(ALPHA)2P32435 120 aa2.05□□□□□ -2.08
MSH6YDR097C HOS4P40480 1083 aa2.05□□□□□ -2.08
MSH6YDR097C URM1P40554 99 aaPredicted RBP2.05□□□□□ -2.08
MSH6YDR097C TAF1P46677 1066 aa2.05□□□□□ -2.08
MSH6YDR097C UBX4P54730 416 aa2.05□□□□□ -2.08
MSH6YDR097C LRS4Q04087 347 aaKnown RBP2.05□□□□□ -2.08
MSH6YDR097C LAP2Q10740 671 aa2.05□□□□□ -2.08
MSH6YDR097C RIB2Q12362 591 aaKnown RBP2.05□□□□□ -2.08
MSH6YDR097C YBR182C-AQ8TGU6 64 aa2.05□□□□□ -2.08
MSH6YDR097C NAR1P23503 491 aaKnown RBP2.05□□□□□ -2.08
MSH6YDR097C DPB3P27344 201 aa2.05□□□□□ -2.08
MSH6YDR097C KIP1P28742 1111 aa2.05□□□□□ -2.08
MSH6YDR097C FUN30P31380 1131 aa2.05□□□□□ -2.08
MSH6YDR097C HSP78P33416 811 aa2.05□□□□□ -2.08
MSH6YDR097C STO1P34160 861 aaKnown RBP2.05□□□□□ -2.08
MSH6YDR097C POA1P38218 177 aa2.05□□□□□ -2.08
MSH6YDR097C GZF3P42944 551 aaKnown RBP2.05□□□□□ -2.08
MSH6YDR097C PAP2P53632 584 aaKnown RBP2.05□□□□□ -2.08
MSH6YDR097C CUZ1P53899 274 aa2.05□□□□□ -2.08
MSH6YDR097C UBP2Q01476 1272 aa2.05□□□□□ -2.08
MSH6YDR097C TPP1Q03796 238 aa2.05□□□□□ -2.08
MSH6YDR097C ACM1Q08981 209 aa2.05□□□□□ -2.08
MSH6YDR097C ACO1P19414 778 aaKnown RBP RIP-Chip data2.04□□□□□ -2.08not detected
MSH6YDR097C SFA1P32771 386 aa2.04□□□□□ -2.08
MSH6YDR097C NPL6P32832 435 aa2.04□□□□□ -2.08
MSH6YDR097C BLI1P35727 113 aa2.04□□□□□ -2.08
MSH6YDR097C EMC3P36039 253 aa2.04□□□□□ -2.08
MSH6YDR097C HSE1P38753 452 aa2.04□□□□□ -2.08
MSH6YDR097C QNS1P38795 714 aaKnown RBP2.04□□□□□ -2.08
MSH6YDR097C CKB2P38930 258 aa2.04□□□□□ -2.08
MSH6YDR097C MNN11P46985 422 aaKnown RBP2.04□□□□□ -2.08
MSH6YDR097C RSA3Q05942 220 aaKnown RBP2.04□□□□□ -2.08
MSH6YDR097C BI4P03879 638 aa2.04□□□□□ -2.08
MSH6YDR097C RPS21AP0C0V8 87 aaKnown RBP2.04□□□□□ -2.08
MSH6YDR097C CDC26P14724 124 aa2.04□□□□□ -2.08
MSH6YDR097C ACE2P21192 770 aa2.04□□□□□ -2.08
MSH6YDR097C MCM3P24279 971 aaKnown RBP2.04□□□□□ -2.08
MSH6YDR097C NAM7P30771 971 aaKnown RBP2.04□□□□□ -2.08
MSH6YDR097C REC104P33323 182 aa2.04□□□□□ -2.08
MSH6YDR097C SLC1P33333 303 aa2.04□□□□□ -2.08
MSH6YDR097C RFC1P38630 861 aaKnown RBP2.04□□□□□ -2.08
MSH6YDR097C GIC1P38785 314 aa2.04□□□□□ -2.08
MSH6YDR097C PPE1P38796 400 aa2.04□□□□□ -2.08
MSH6YDR097C YJR039WP47107 1121 aa2.04□□□□□ -2.08
MSH6YDR097C YLR257WQ06146 321 aaKnown RBP2.04□□□□□ -2.08
MSH6YDR097C ATG33Q06485 197 aa2.04□□□□□ -2.08
MSH6YDR097C RCL1Q08096 367 aaPredicted RBP2.04□□□□□ -2.08
MSH6YDR097C RPS21BQ3E754 87 aaKnown RBP2.04□□□□□ -2.08
MSH6YDR097C YRF1-3P0CX14 1859 aa2.04□□□□□ -2.08
MSH6YDR097C YRF1-7P0CX15 1859 aa2.04□□□□□ -2.08
MSH6YDR097C YRF1-6P53819 1859 aa2.04□□□□□ -2.08
MSH6YDR097C RIM15P43565 1770 aa2.04□□□□□ -2.08
MSH6YDR097C DIF1O13577 133 aa2.04□□□□□ -2.08
MSH6YDR097C PDC5P16467 563 aaKnown RBP2.04□□□□□ -2.08
MSH6YDR097C SBE2P42223 864 aaKnown RBP2.04□□□□□ -2.08
MSH6YDR097C MOT3P54785 490 aaKnown RBP2.04□□□□□ -2.08
MSH6YDR097C ECM9Q02202 377 aa2.04□□□□□ -2.08
MSH6YDR097C GIR2Q03768 265 aaPredicted RBP2.04□□□□□ -2.08
MSH6YDR097C HRQ1Q05549 1077 aa2.04□□□□□ -2.08
MSH6YDR097C OPT2Q06593 877 aa2.04□□□□□ -2.08
MSH6YDR097C SDH5Q08230 162 aa2.04□□□□□ -2.08
MSH6YDR097C YTM1Q12024 460 aaPredicted RBP2.04□□□□□ -2.08
MSH6YDR097C CDC6P09119 513 aa2.03□□□□□ -2.08
MSH6YDR097C HOG1P32485 435 aa2.03□□□□□ -2.08
MSH6YDR097C RPD3P32561 433 aa2.03□□□□□ -2.08
MSH6YDR097C BEM4P39011 633 aa2.03□□□□□ -2.08
MSH6YDR097C TMA108P40462 946 aa2.03□□□□□ -2.08
MSH6YDR097C ROG3P43602 733 aa2.03□□□□□ -2.08
MSH6YDR097C IRC5P43610 853 aa2.03□□□□□ -2.08
MSH6YDR097C CAF120P53836 1060 aa2.03□□□□□ -2.08
MSH6YDR097C PTA1Q01329 785 aaPredicted RBP2.03□□□□□ -2.08
MSH6YDR097C OMS1Q06668 471 aa2.03□□□□□ -2.08
MSH6YDR097C YPL272CQ08984 517 aa2.03□□□□□ -2.08
MSH6YDR097C FAS2P19097 1887 aaKnown RBP2.03□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 125.2 ms