RNA–Protein interactions for RNA: YDR078C

SHU2, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU2, Length 672 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU2YDR078C SKY1Q03656 742 aa4.93□□□□□ -1.62
SHU2YDR078C GSF2Q04697 403 aaKnown RBP4.93□□□□□ -1.62
SHU2YDR078C PHM6Q05637 104 aa4.93□□□□□ -1.62
SHU2YDR078C RPS21BQ3E754 87 aaKnown RBP4.93□□□□□ -1.62
SHU2YDR078C YEF3P16521 1044 aaKnown RBP4.92□□□□□ -1.62
SHU2YDR078C COX11P19516 300 aaKnown RBP4.92□□□□□ -1.62
SHU2YDR078C MAL31P38156 614 aa4.92□□□□□ -1.62
SHU2YDR078C YJR039WP47107 1121 aa4.92□□□□□ -1.62
SHU2YDR078C SUB1P54000 292 aaKnown RBP4.92□□□□□ -1.62
SHU2YDR078C YHM2Q04013 314 aa4.92□□□□□ -1.62
SHU2YDR078C ADY3Q07732 790 aa4.92□□□□□ -1.62
SHU2YDR078C TPO1Q07824 586 aa4.92□□□□□ -1.62
SHU2YDR078C YPR027CQ12079 277 aa4.92□□□□□ -1.62
SHU2YDR078C RPS21AP0C0V8 87 aaKnown RBP4.91□□□□□ -1.62
SHU2YDR078C SWE1P32944 819 aa4.91□□□□□ -1.62
SHU2YDR078C NIC96P34077 839 aa4.91□□□□□ -1.62
SHU2YDR078C MIP6P38760 659 aaKnown RBP4.91□□□□□ -1.62
SHU2YDR078C SSZ1P38788 538 aaKnown RBP4.91□□□□□ -1.62
SHU2YDR078C URM1P40554 99 aaPredicted RBP4.91□□□□□ -1.62
SHU2YDR078C SSY5P47002 699 aa4.91□□□□□ -1.62
SHU2YDR078C SLD3P53135 668 aa4.91□□□□□ -1.62
SHU2YDR078C SPC105P53148 917 aa4.91□□□□□ -1.62
SHU2YDR078C ARP4P80428 489 aa4.91□□□□□ -1.62
SHU2YDR078C MET14Q02196 202 aa4.91□□□□□ -1.62
SHU2YDR078C VMS1Q04311 632 aaKnown RBP4.91□□□□□ -1.62
SHU2YDR078C WHI4Q07655 649 aaKnown RBP4.91□□□□□ -1.62
SHU2YDR078C RPP2AP05319 106 aaKnown RBP4.9□□□□□ -1.63
SHU2YDR078C PIF1P07271 859 aa4.9□□□□□ -1.63
SHU2YDR078C SER1P33330 395 aaKnown RBP4.9□□□□□ -1.63
SHU2YDR078C MET12P46151 657 aa4.9□□□□□ -1.63
SHU2YDR078C BFA1P47113 574 aa4.9□□□□□ -1.63
SHU2YDR078C PIP2P52960 996 aa4.9□□□□□ -1.63
SHU2YDR078C PLB2Q03674 706 aa4.9□□□□□ -1.63
SHU2YDR078C PEX15Q08215 383 aa4.9□□□□□ -1.63
SHU2YDR078C UPC2Q12151 913 aa4.9□□□□□ -1.63
SHU2YDR078C GPR1Q12361 961 aa4.9□□□□□ -1.63
SHU2YDR078C TAD3Q9URQ3 322 aa4.9□□□□□ -1.63
SHU2YDR078C GAL1P04385 528 aa4.89□□□□□ -1.63
SHU2YDR078C RPS13P05756 151 aaKnown RBP4.89□□□□□ -1.63
SHU2YDR078C SWI6P09959 803 aa4.89□□□□□ -1.63
SHU2YDR078C SEC65P29478 273 aa4.89□□□□□ -1.63
SHU2YDR078C FUI1P38196 639 aa4.89□□□□□ -1.63
SHU2YDR078C FAT1P38225 669 aa4.89□□□□□ -1.63
SHU2YDR078C BEM4P39011 633 aa4.89□□□□□ -1.63
SHU2YDR078C RSC8P43609 557 aaKnown RBP4.89□□□□□ -1.63
SHU2YDR078C MTR3P48240 250 aaPredicted RBP4.89□□□□□ -1.63
SHU2YDR078C BRE5P53741 515 aaKnown RBP4.89□□□□□ -1.63
SHU2YDR078C UBX4P54730 416 aa4.89□□□□□ -1.63
SHU2YDR078C CEF1Q03654 590 aaPredicted RBP4.89□□□□□ -1.63
SHU2YDR078C CLU1Q03690 1277 aaKnown RBP4.89□□□□□ -1.63
SHU2YDR078C SGD1Q06132 899 aa4.89□□□□□ -1.63
SHU2YDR078C SED4P25365 1065 aa4.88□□□□□ -1.63
SHU2YDR078C STE14P32584 239 aa4.88□□□□□ -1.63
SHU2YDR078C SHM2P37291 469 aaKnown RBP4.88□□□□□ -1.63
SHU2YDR078C RRP8P38961 392 aaKnown RBP4.88□□□□□ -1.63
SHU2YDR078C SAK1P38990 1142 aa4.88□□□□□ -1.63
SHU2YDR078C RNR4P49723 345 aaKnown RBP4.88□□□□□ -1.63
SHU2YDR078C GTF1P53260 183 aaPredicted RBP4.88□□□□□ -1.63
SHU2YDR078C SNO2P53823 222 aa4.88□□□□□ -1.63
SHU2YDR078C GPD1Q00055 391 aaKnown RBP4.88□□□□□ -1.63
SHU2YDR078C ROT1Q03691 256 aa4.88□□□□□ -1.63
SHU2YDR078C ATG16Q03818 150 aa4.88□□□□□ -1.63
SHU2YDR078C HIS5P07172 385 aa4.87□□□□□ -1.63
SHU2YDR078C PGI1P12709 554 aaKnown RBP4.87□□□□□ -1.63
SHU2YDR078C HCA4P20448 770 aaKnown RBP4.87□□□□□ -1.63
SHU2YDR078C KCC4P25389 1037 aa4.87□□□□□ -1.63
SHU2YDR078C PTP2P29461 750 aa4.87□□□□□ -1.63
SHU2YDR078C YKU70P32807 602 aa4.87□□□□□ -1.63
SHU2YDR078C YKL133CP36066 463 aa4.87□□□□□ -1.63
SHU2YDR078C YKR075CP36155 307 aa4.87□□□□□ -1.63
SHU2YDR078C LAM1P38851 1228 aa4.87□□□□□ -1.63
SHU2YDR078C PZF1P39933 429 aa4.87□□□□□ -1.63
SHU2YDR078C IES5P40060 125 aa4.87□□□□□ -1.63
SHU2YDR078C PFA3P42836 336 aa4.87□□□□□ -1.63
SHU2YDR078C ASI2P53895 289 aa4.87□□□□□ -1.63
SHU2YDR078C ORC4P54791 529 aa4.87□□□□□ -1.63
SHU2YDR078C LEE1Q02799 301 aaKnown RBP4.87□□□□□ -1.63
SHU2YDR078C ASM4Q05166 528 aa4.87□□□□□ -1.63
SHU2YDR078C ECM38Q05902 660 aaPredicted RBP4.87□□□□□ -1.63
SHU2YDR078C MLC2Q06580 163 aa4.87□□□□□ -1.63
SHU2YDR078C HMI1Q12039 706 aa4.87□□□□□ -1.63
SHU2YDR078C RRP6Q12149 733 aaKnown RBP4.87□□□□□ -1.63
SHU2YDR078C NOP56Q12460 504 aaKnown RBP RIP-Chip data4.87□□□□□ -1.63not detected
SHU2YDR078C CDC6P09119 513 aa4.86□□□□□ -1.63
SHU2YDR078C CTS1P29029 562 aa4.86□□□□□ -1.63
SHU2YDR078C CHA4P43634 648 aa4.86□□□□□ -1.63
SHU2YDR078C SET2P46995 733 aaKnown RBP4.86□□□□□ -1.63
SHU2YDR078C GCV2P49095 1034 aa4.86□□□□□ -1.63
SHU2YDR078C MUS81Q04149 632 aaPredicted RBP4.86□□□□□ -1.63
SHU2YDR078C YOR352WQ08816 343 aa4.86□□□□□ -1.63
SHU2YDR078C ATP12P22135 325 aa4.85□□□□□ -1.63
SHU2YDR078C TRX2P22803 104 aaKnown RBP4.85□□□□□ -1.63
SHU2YDR078C EMC1P25574 760 aa4.85□□□□□ -1.63
SHU2YDR078C DPB3P27344 201 aa4.85□□□□□ -1.63
SHU2YDR078C AKL1P38080 1108 aaKnown RBP4.85□□□□□ -1.63
SHU2YDR078C APN2P38207 520 aa4.85□□□□□ -1.63
SHU2YDR078C RIM4P38741 713 aa4.85□□□□□ -1.63
SHU2YDR078C NCS6P53088 359 aa4.85□□□□□ -1.63
SHU2YDR078C YGR021WP53212 290 aa4.85□□□□□ -1.63
SHU2YDR078C VPS62P53285 467 aa4.85□□□□□ -1.63
Retrieved 100 of 5,963 RNA–protein pairs in 44.2 ms