RNA–Protein interactions for RNA: YDL060W

TSR1, Transcript of Protein required for processing of 20S pre-rRNA in the cytoplasm, yeastyeast

Gene TSR1, Length 2,367 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TSR1YDL060W HIF1Q12373 385 aa4.31□□□□□ -1.72
TSR1YDL060W POL1P13382 1468 aa4.31□□□□□ -1.72
TSR1YDL060W HIS5P07172 385 aa4.31□□□□□ -1.72
TSR1YDL060W ROX1P25042 368 aa4.31□□□□□ -1.72
TSR1YDL060W CDC48P25694 835 aaKnown RBP4.31□□□□□ -1.72
TSR1YDL060W ATG19P35193 415 aa4.31□□□□□ -1.72
TSR1YDL060W YKR078WP36158 585 aaKnown RBP4.31□□□□□ -1.72
TSR1YDL060W SFB2P53953 876 aa4.31□□□□□ -1.72
TSR1YDL060W MMS1Q06211 1407 aa4.3□□□□□ -1.72
TSR1YDL060W APA1P16550 321 aaKnown RBP4.3□□□□□ -1.72
TSR1YDL060W STE11P23561 717 aa4.3□□□□□ -1.72
TSR1YDL060W PLB1P39105 664 aa4.3□□□□□ -1.72
TSR1YDL060W SNU66Q12420 587 aaPredicted RBP4.3□□□□□ -1.72
TSR1YDL060W SPE1P08432 466 aa4.29□□□□□ -1.72
TSR1YDL060W CTS1P29029 562 aa4.29□□□□□ -1.72
TSR1YDL060W PTP2P29461 750 aa4.29□□□□□ -1.72
TSR1YDL060W YBR284WP38150 797 aa4.29□□□□□ -1.72
TSR1YDL060W MAL31P38156 614 aa4.29□□□□□ -1.72
TSR1YDL060W INH1P01097 85 aa4.29□□□□□ -1.72
TSR1YDL060W CDC6P09119 513 aa4.29□□□□□ -1.72
TSR1YDL060W RFA1P22336 621 aaKnown RBP4.29□□□□□ -1.72
TSR1YDL060W NIC96P34077 839 aa4.29□□□□□ -1.72
TSR1YDL060W PTH2P34222 208 aa4.29□□□□□ -1.72
TSR1YDL060W BLI1P35727 113 aa4.29□□□□□ -1.72
TSR1YDL060W KOG1P38873 1557 aa4.29□□□□□ -1.72
TSR1YDL060W CDA1Q06702 301 aa4.29□□□□□ -1.72
TSR1YDL060W ADY3Q07732 790 aa4.29□□□□□ -1.72
TSR1YDL060W RRP6Q12149 733 aaKnown RBP4.29□□□□□ -1.72
TSR1YDL060W TUB2P02557 457 aaKnown RBP4.28□□□□□ -1.72
TSR1YDL060W GSY1P23337 708 aa4.28□□□□□ -1.72
TSR1YDL060W HCM1P25364 564 aa4.28□□□□□ -1.72
TSR1YDL060W CCM1P48237 864 aaPredicted RBP4.28□□□□□ -1.72
TSR1YDL060W MET13P53128 600 aa4.28□□□□□ -1.72
TSR1YDL060W DNA2P38859 1522 aa4.28□□□□□ -1.72
TSR1YDL060W FOB1O13329 566 aa4.28□□□□□ -1.72
TSR1YDL060W HSC82P15108 705 aaKnown RBP4.28□□□□□ -1.72
TSR1YDL060W RAD53P22216 821 aa4.28□□□□□ -1.72
TSR1YDL060W LST4P34239 828 aa4.28□□□□□ -1.72
TSR1YDL060W UBP6P43593 499 aaKnown RBP4.28□□□□□ -1.72
TSR1YDL060W EAF7P53911 425 aaKnown RBP4.28□□□□□ -1.72
TSR1YDL060W YML131WQ03102 365 aa4.28□□□□□ -1.72
TSR1YDL060W GSF2Q04697 403 aaKnown RBP4.28□□□□□ -1.72
TSR1YDL060W YOL087CQ99247 1116 aa4.28□□□□□ -1.72
TSR1YDL060W MYO4P32492 1471 aa4.28□□□□□ -1.72
TSR1YDL060W YPK9Q12697 1472 aa4.27□□□□□ -1.73
TSR1YDL060W CDC9P04819 755 aa4.27□□□□□ -1.73
TSR1YDL060W GFD2P25370 566 aaKnown RBP4.27□□□□□ -1.73
TSR1YDL060W RRP8P38961 392 aaKnown RBP4.27□□□□□ -1.73
TSR1YDL060W RSC8P43609 557 aaKnown RBP4.27□□□□□ -1.73
TSR1YDL060W RAI1P53063 387 aaKnown RBP4.27□□□□□ -1.73
TSR1YDL060W LCD1Q04377 747 aa4.27□□□□□ -1.73
TSR1YDL060W NOT3P06102 836 aaKnown RBP4.27□□□□□ -1.73
TSR1YDL060W SRD1P09007 221 aa4.27□□□□□ -1.73
TSR1YDL060W PCL2P25693 308 aa4.27□□□□□ -1.73
TSR1YDL060W DBF20P32328 564 aa4.27□□□□□ -1.73
TSR1YDL060W KTR4P38131 464 aa4.27□□□□□ -1.73
TSR1YDL060W TSL1P38427 1098 aaKnown RBP4.27□□□□□ -1.73
TSR1YDL060W RIM4P38741 713 aa4.27□□□□□ -1.73
TSR1YDL060W SIT1P39980 628 aa4.27□□□□□ -1.73
TSR1YDL060W YJR096WP47137 282 aa4.27□□□□□ -1.73
TSR1YDL060W UBA2P52488 636 aa4.27□□□□□ -1.73
TSR1YDL060W RTP1Q12751 981 aa4.27□□□□□ -1.73
TSR1YDL060W RAD18P10862 487 aa4.26□□□□□ -1.73
TSR1YDL060W MSD1P15179 658 aaKnown RBP4.26□□□□□ -1.73
TSR1YDL060W PRP19P32523 503 aaKnown RBP4.26□□□□□ -1.73
TSR1YDL060W YHL041WP38730 149 aa4.26□□□□□ -1.73
TSR1YDL060W NPP2P39997 493 aa4.26□□□□□ -1.73
TSR1YDL060W NDE1P40215 560 aa4.26□□□□□ -1.73
TSR1YDL060W CHA4P43634 648 aa4.26□□□□□ -1.73
TSR1YDL060W PSR2Q07949 397 aa4.26□□□□□ -1.73
TSR1YDL060W YPR071WQ12346 211 aa4.26□□□□□ -1.73
TSR1YDL060W TY3B-GQ99315 1547 aa4.26□□□□□ -1.73
TSR1YDL060W RKR1Q04781 1562 aa4.26□□□□□ -1.73
TSR1YDL060W OPI1P21957 404 aa4.26□□□□□ -1.73
TSR1YDL060W KCC4P25389 1037 aa4.26□□□□□ -1.73
TSR1YDL060W REC104P33323 182 aa4.26□□□□□ -1.73
TSR1YDL060W TRM2P33753 639 aa4.26□□□□□ -1.73
TSR1YDL060W NIT2P47016 307 aa4.26□□□□□ -1.73
TSR1YDL060W SNP1Q00916 300 aaPredicted RBP4.26□□□□□ -1.73
TSR1YDL060W MLC2Q06580 163 aa4.26□□□□□ -1.73
TSR1YDL060W PHR1P05066 565 aaKnown RBP RIP-Chip data4.25□□□□□ -1.73not detected
TSR1YDL060W SFL1P20134 766 aa4.25□□□□□ -1.73
TSR1YDL060W AEP2P22136 580 aa4.25□□□□□ -1.73
TSR1YDL060W SED4P25365 1065 aa4.25□□□□□ -1.73
TSR1YDL060W YKL133CP36066 463 aa4.25□□□□□ -1.73
TSR1YDL060W JNM1P36224 373 aa4.25□□□□□ -1.73
TSR1YDL060W DUG1P43616 481 aaKnown RBP4.25□□□□□ -1.73
TSR1YDL060W GCN2P15442 1659 aa4.25□□□□□ -1.73
TSR1YDL060W NPP1P25353 742 aa4.25□□□□□ -1.73
TSR1YDL060W DAL3P32459 195 aa4.25□□□□□ -1.73
TSR1YDL060W RPS0AP32905 252 aaKnown RBP4.25□□□□□ -1.73
TSR1YDL060W OAF1P39720 1047 aaPredicted RBP4.25□□□□□ -1.73
TSR1YDL060W HIS6P40545 261 aa4.25□□□□□ -1.73
TSR1YDL060W MNT3P40549 630 aa4.25□□□□□ -1.73
TSR1YDL060W SAP185P40856 1058 aa4.25□□□□□ -1.73
TSR1YDL060W REH1Q06709 432 aa4.25□□□□□ -1.73
TSR1YDL060W SSP2Q08646 371 aa4.25□□□□□ -1.73
TSR1YDL060W CAD1P24813 409 aaKnown RBP4.24□□□□□ -1.73
TSR1YDL060W PET10P36139 283 aa4.24□□□□□ -1.73
TSR1YDL060W GPP2P40106 250 aaKnown RBP4.24□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms