RNA–Protein interactions for RNA: YBR275C

RIF1, Transcript of Protein that binds to the Rap1p C-terminus, yeastyeast

Gene RIF1, Length 5,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RIF1YBR275C PDB1P32473 366 aaKnown RBP3.04□□□□□ -1.92
RIF1YBR275C SSO1P32867 290 aa3.04□□□□□ -1.92
RIF1YBR275C PXA2P34230 853 aa3.04□□□□□ -1.92
RIF1YBR275C ERG7P38604 731 aa3.04□□□□□ -1.92
RIF1YBR275C SPO22P40511 975 aa3.04□□□□□ -1.92
RIF1YBR275C IRR1P40541 1150 aa3.04□□□□□ -1.92
RIF1YBR275C RCM1P53972 490 aa3.04□□□□□ -1.92
RIF1YBR275C RSC4Q02206 625 aa3.04□□□□□ -1.92
RIF1YBR275C UBX5Q06682 500 aa3.04□□□□□ -1.92
RIF1YBR275C AAD15Q08361 143 aa3.04□□□□□ -1.92
RIF1YBR275C ATG29Q12092 213 aa3.04□□□□□ -1.92
RIF1YBR275C HMG2P12684 1045 aa3.04□□□□□ -1.92
RIF1YBR275C PFK2P16862 959 aaKnown RBP RIP-Chip data3.04□□□□□ -1.92not detected
RIF1YBR275C UBC6P33296 250 aaPredicted RBP3.04□□□□□ -1.92
RIF1YBR275C UBP11P36026 717 aa3.04□□□□□ -1.92
RIF1YBR275C SWD1P39706 426 aa3.04□□□□□ -1.92
RIF1YBR275C SSP120P39931 234 aaKnown RBP3.04□□□□□ -1.92
RIF1YBR275C CNN1P43618 361 aa3.04□□□□□ -1.92
RIF1YBR275C DLD2P46681 530 aaKnown RBP3.04□□□□□ -1.92
RIF1YBR275C NOP19P53317 196 aaPredicted RBP3.04□□□□□ -1.92
RIF1YBR275C FRK1Q03002 865 aaPredicted RBP3.04□□□□□ -1.92
RIF1YBR275C SFI1Q12369 946 aa3.04□□□□□ -1.92
RIF1YBR275C SRB8P25648 1427 aa3.04□□□□□ -1.92
RIF1YBR275C GAL10P04397 699 aa3.04□□□□□ -1.92
RIF1YBR275C SNF1P06782 633 aaKnown RBP3.04□□□□□ -1.92
RIF1YBR275C YGL041W-AP0C5N3 154 aa3.04□□□□□ -1.92
RIF1YBR275C CDC26P14724 124 aa3.04□□□□□ -1.92
RIF1YBR275C SLY1P22213 666 aa3.04□□□□□ -1.92
RIF1YBR275C MBR1P23493 339 aa3.04□□□□□ -1.92
RIF1YBR275C YCP4P25349 247 aaKnown RBP3.04□□□□□ -1.92
RIF1YBR275C MAL31P38156 614 aa3.04□□□□□ -1.92
RIF1YBR275C YJL193WP39542 402 aa3.04□□□□□ -1.92
RIF1YBR275C KAP123P40069 1113 aaKnown RBP3.04□□□□□ -1.92
RIF1YBR275C FAF1P40546 346 aaPredicted RBP3.04□□□□□ -1.92
RIF1YBR275C RPM2Q02773 1202 aa3.04□□□□□ -1.92
RIF1YBR275C SSY1Q03770 852 aa3.04□□□□□ -1.92
RIF1YBR275C APC4Q04601 652 aa3.04□□□□□ -1.92
RIF1YBR275C ICL2Q12031 575 aa3.04□□□□□ -1.92
RIF1YBR275C PNO1Q99216 274 aaKnown RBP3.04□□□□□ -1.92
RIF1YBR275C SPS1P08458 490 aa3.03□□□□□ -1.92
RIF1YBR275C RPS24AP0CX31 135 aaKnown RBP3.03□□□□□ -1.92
RIF1YBR275C RPS24BP0CX32 135 aaKnown RBP3.03□□□□□ -1.92
RIF1YBR275C PUP1P25043 261 aa3.03□□□□□ -1.92
RIF1YBR275C CPS1P27614 576 aa3.03□□□□□ -1.92
RIF1YBR275C MCX1P38323 520 aaPredicted RBP3.03□□□□□ -1.92
RIF1YBR275C PRE3P38624 215 aa3.03□□□□□ -1.92
RIF1YBR275C BIG1P38813 335 aa3.03□□□□□ -1.92
RIF1YBR275C ATM1P40416 690 aa3.03□□□□□ -1.92
RIF1YBR275C MSH4P40965 878 aaPredicted RBP3.03□□□□□ -1.92
RIF1YBR275C EPL1P43572 832 aa3.03□□□□□ -1.92
RIF1YBR275C KEL3Q08979 651 aaPredicted RBP3.03□□□□□ -1.92
RIF1YBR275C GPR1Q12361 961 aa3.03□□□□□ -1.92
RIF1YBR275C LAG2Q92325 660 aa3.03□□□□□ -1.92
RIF1YBR275C IKI3Q06706 1349 aaKnown RBP3.03□□□□□ -1.92
RIF1YBR275C STE5P32917 917 aa3.03□□□□□ -1.92
RIF1YBR275C MDJ1P35191 511 aa3.03□□□□□ -1.92
RIF1YBR275C PFF1P38244 976 aa3.03□□□□□ -1.92
RIF1YBR275C SHC1P39000 512 aa3.03□□□□□ -1.92
RIF1YBR275C ERP6P53198 216 aa3.03□□□□□ -1.92
RIF1YBR275C UBP3Q01477 912 aaKnown RBP RIP-Chip data3.03□□□□□ -1.92 RIP-Chip
RIF1YBR275C VMS1Q04311 632 aaKnown RBP3.03□□□□□ -1.92
RIF1YBR275C APC5Q08683 685 aa3.03□□□□□ -1.92
RIF1YBR275C APM4Q99186 491 aa3.03□□□□□ -1.92
RIF1YBR275C YRF1-4O13559 1382 aa3.03□□□□□ -1.92
RIF1YBR275C KAR1P11927 433 aa3.03□□□□□ -1.92
RIF1YBR275C GRX2P17695 143 aaKnown RBP3.03□□□□□ -1.92
RIF1YBR275C AEP2P22136 580 aa3.03□□□□□ -1.92
RIF1YBR275C YKR078WP36158 585 aaKnown RBP3.03□□□□□ -1.92
RIF1YBR275C AKL1P38080 1108 aaKnown RBP3.03□□□□□ -1.92
RIF1YBR275C RIM4P38741 713 aa3.03□□□□□ -1.92
RIF1YBR275C BUD16P39988 312 aa3.03□□□□□ -1.92
RIF1YBR275C HUL4P40985 892 aa3.03□□□□□ -1.92
RIF1YBR275C YKE2P52553 114 aa3.03□□□□□ -1.92
RIF1YBR275C TIM11P81449 96 aaPredicted RBP3.03□□□□□ -1.92
RIF1YBR275C GTR1Q00582 310 aa3.03□□□□□ -1.92
RIF1YBR275C DIG2Q03373 323 aaKnown RBP3.03□□□□□ -1.92
RIF1YBR275C PIN2Q12057 282 aa3.03□□□□□ -1.92
RIF1YBR275C NOP14Q99207 810 aaKnown RBP3.03□□□□□ -1.92
RIF1YBR275C WHI2P12611 486 aa3.03□□□□□ -1.92
RIF1YBR275C PRP16P15938 1071 aaPredicted RBP3.03□□□□□ -1.92
RIF1YBR275C ERG6P25087 383 aaKnown RBP3.03□□□□□ -1.92
RIF1YBR275C RGT1P32862 1170 aa3.03□□□□□ -1.92
RIF1YBR275C ALR2P43553 858 aa3.03□□□□□ -1.92
RIF1YBR275C YGR122WP53272 402 aa3.03□□□□□ -1.92
RIF1YBR275C SMA1Q02651 245 aa3.03□□□□□ -1.92
RIF1YBR275C MSC2Q03455 724 aa3.03□□□□□ -1.92
RIF1YBR275C RCF1Q03713 159 aa3.03□□□□□ -1.92
RIF1YBR275C YLR326WQ06170 240 aaKnown RBP3.03□□□□□ -1.92
RIF1YBR275C ALE1Q08548 619 aa3.03□□□□□ -1.92
RIF1YBR275C YOR238WQ08634 303 aa3.03□□□□□ -1.92
RIF1YBR275C SPE3Q12074 293 aaKnown RBP3.03□□□□□ -1.92
RIF1YBR275C RFM1Q12192 310 aa3.03□□□□□ -1.92
RIF1YBR275C MYO4P32492 1471 aa3.02□□□□□ -1.93
RIF1YBR275C KEX2P13134 814 aa3.02□□□□□ -1.93
RIF1YBR275C DPB3P27344 201 aa3.02□□□□□ -1.93
RIF1YBR275C IMP2'P32351 346 aa3.02□□□□□ -1.93
RIF1YBR275C TRM2P33753 639 aa3.02□□□□□ -1.93
RIF1YBR275C SLD2P34252 453 aa3.02□□□□□ -1.93
RIF1YBR275C NTH2P35172 780 aa3.02□□□□□ -1.93
RIF1YBR275C LRP1P38801 184 aaKnown RBP3.02□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 49.3 ms