RNA–Protein interactions for RNA: YBR231C

SWC5, Transcript of Component of the SWR1 complex, yeast

Gene SWC5, Length 912 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWC5	YBR231C	CTF3	Q12748	733 aa		11.46	□□□□□ -0.57
SWC5	YBR231C	UBR2	Q07963	1872 aa		11.45	□□□□□ -0.58
SWC5	YBR231C	GAL10	P04397	699 aa		11.45	□□□□□ -0.58
SWC5	YBR231C	DAL2	P25335	343 aa		11.45	□□□□□ -0.58
SWC5	YBR231C	HXT1	P32465	570 aa		11.45	□□□□□ -0.58
SWC5	YBR231C	CSE2	P33308	149 aa		11.45	□□□□□ -0.58
SWC5	YBR231C	MRPL7	P36519	292 aa		11.45	□□□□□ -0.58
SWC5	YBR231C	MCX1	P38323	520 aa	Predicted RBP	11.45	□□□□□ -0.58
SWC5	YBR231C	OSW7	P43611	510 aa		11.45	□□□□□ -0.58
SWC5	YBR231C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	11.45	□□□□□ -0.58	not detected
SWC5	YBR231C	SYH1	Q02875	849 aa	Known RBP	11.45	□□□□□ -0.58
SWC5	YBR231C	ECM3	Q99252	613 aa		11.45	□□□□□ -0.58
SWC5	YBR231C	MSD1	P15179	658 aa	Known RBP	11.44	□□□□□ -0.58
SWC5	YBR231C	SPT5	P27692	1063 aa	Known RBP	11.44	□□□□□ -0.58
SWC5	YBR231C	MAC1	P35192	417 aa		11.44	□□□□□ -0.58
SWC5	YBR231C	KDX1	P36005	433 aa		11.44	□□□□□ -0.58
SWC5	YBR231C	HEL1	P36113	551 aa		11.44	□□□□□ -0.58
SWC5	YBR231C	MSC7	P38694	644 aa		11.44	□□□□□ -0.58
SWC5	YBR231C	DYS1	P38791	387 aa		11.44	□□□□□ -0.58
SWC5	YBR231C	BUD16	P39988	312 aa		11.44	□□□□□ -0.58
SWC5	YBR231C	YGR021W	P53212	290 aa		11.44	□□□□□ -0.58
SWC5	YBR231C	DRN1	P53255	507 aa	Known RBP	11.44	□□□□□ -0.58
SWC5	YBR231C	YLR455W	Q06188	304 aa		11.44	□□□□□ -0.58
SWC5	YBR231C	YOL098C	Q12496	1037 aa		11.44	□□□□□ -0.58
SWC5	YBR231C	RNR1	P21524	888 aa	Known RBP	11.43	□□□□□ -0.58
SWC5	YBR231C	RAD57	P25301	460 aa		11.43	□□□□□ -0.58
SWC5	YBR231C	CAJ1	P39101	391 aa		11.43	□□□□□ -0.58
SWC5	YBR231C	EFM4	P40516	257 aa		11.43	□□□□□ -0.58
SWC5	YBR231C	PHO86	P46956	311 aa		11.43	□□□□□ -0.58
SWC5	YBR231C	ALT1	P52893	592 aa		11.43	□□□□□ -0.58
SWC5	YBR231C	EEB1	Q02891	456 aa		11.43	□□□□□ -0.58
SWC5	YBR231C	RCR2	Q03446	210 aa	Known RBP	11.43	□□□□□ -0.58
SWC5	YBR231C	SNU56	Q03782	492 aa	Known RBP	11.43	□□□□□ -0.58
SWC5	YBR231C	TIF35	Q04067	274 aa	Known RBP	11.43	□□□□□ -0.58
SWC5	YBR231C	YPR027C	Q12079	277 aa		11.43	□□□□□ -0.58
SWC5	YBR231C	STO1	P34160	861 aa	Known RBP	11.42	□□□□□ -0.58
SWC5	YBR231C	YMC2	P38087	329 aa		11.42	□□□□□ -0.58
SWC5	YBR231C	YHR202W	P38887	602 aa		11.42	□□□□□ -0.58
SWC5	YBR231C	YTA12	P40341	825 aa		11.42	□□□□□ -0.58
SWC5	YBR231C	YJR054W	P47114	497 aa		11.42	□□□□□ -0.58
SWC5	YBR231C	YER152C	P10356	443 aa		11.41	□□□□□ -0.58
SWC5	YBR231C	VPS3	P23643	1011 aa		11.41	□□□□□ -0.58
SWC5	YBR231C	EXO5	P38289	585 aa		11.41	□□□□□ -0.58
SWC5	YBR231C	YMR124W	P39523	943 aa	Known RBP	11.41	□□□□□ -0.58
SWC5	YBR231C	PSY2	P40164	858 aa		11.41	□□□□□ -0.58
SWC5	YBR231C	OPT1	P40897	799 aa		11.41	□□□□□ -0.58
SWC5	YBR231C	APT1	P49435	187 aa	Known RBP	11.41	□□□□□ -0.58
SWC5	YBR231C	ERV41	Q04651	352 aa		11.41	□□□□□ -0.58
SWC5	YBR231C	CDD1	Q06549	142 aa		11.41	□□□□□ -0.58
SWC5	YBR231C	TAO3	P40468	2376 aa		11.41	□□□□□ -0.58
SWC5	YBR231C	CHS1	P08004	1131 aa		11.4	□□□□□ -0.58
SWC5	YBR231C	CAD1	P24813	409 aa	Known RBP	11.4	□□□□□ -0.58
SWC5	YBR231C	EFB1	P32471	206 aa	Known RBP	11.4	□□□□□ -0.58
SWC5	YBR231C	SRB4	P32569	687 aa		11.4	□□□□□ -0.58
SWC5	YBR231C	NOP4	P37838	685 aa	Known RBP	11.4	□□□□□ -0.58
SWC5	YBR231C	TBS1	P38114	1094 aa		11.4	□□□□□ -0.58
SWC5	YBR231C	JHD1	P40034	492 aa		11.4	□□□□□ -0.58
SWC5	YBR231C	SEC9	P40357	651 aa		11.4	□□□□□ -0.58
SWC5	YBR231C	STP1	Q00947	519 aa		11.4	□□□□□ -0.58
SWC5	YBR231C	YMR018W	Q04364	514 aa		11.4	□□□□□ -0.58
SWC5	YBR231C	SOV1	Q04748	898 aa		11.4	□□□□□ -0.58
SWC5	YBR231C	ESC8	Q08119	714 aa		11.4	□□□□□ -0.58
SWC5	YBR231C	GAL80	P04387	435 aa		11.39	□□□□□ -0.59
SWC5	YBR231C	HAP2	P06774	265 aa		11.39	□□□□□ -0.59
SWC5	YBR231C	CKI1	P20485	582 aa		11.39	□□□□□ -0.59
SWC5	YBR231C	YKL050C	P35736	922 aa		11.39	□□□□□ -0.59
SWC5	YBR231C	APN2	P38207	520 aa		11.39	□□□□□ -0.59
SWC5	YBR231C	TCD1	P38756	429 aa		11.39	□□□□□ -0.59
SWC5	YBR231C	SET5	P38890	526 aa	Known RBP	11.39	□□□□□ -0.59
SWC5	YBR231C	RSC8	P43609	557 aa	Known RBP	11.39	□□□□□ -0.59
SWC5	YBR231C	ZAP1	P47043	880 aa		11.39	□□□□□ -0.59
SWC5	YBR231C	STB4	P50104	949 aa		11.39	□□□□□ -0.59
SWC5	YBR231C	PUS2	P53167	370 aa		11.39	□□□□□ -0.59
SWC5	YBR231C	EAR1	Q03212	550 aa		11.39	□□□□□ -0.59
SWC5	YBR231C	MZM1	Q03429	123 aa	Predicted RBP	11.39	□□□□□ -0.59
SWC5	YBR231C	PKH2	Q12236	1081 aa	Known RBP	11.39	□□□□□ -0.59
SWC5	YBR231C	SPT2	P06843	333 aa	Predicted RBP	11.38	□□□□□ -0.59
SWC5	YBR231C	BLI1	P35727	113 aa		11.38	□□□□□ -0.59
SWC5	YBR231C	SHE3	P38272	425 aa	Known RBP	11.38	□□□□□ -0.59
SWC5	YBR231C	GEM1	P39722	662 aa		11.38	□□□□□ -0.59
SWC5	YBR231C	YEL023C	P39992	682 aa		11.38	□□□□□ -0.59
SWC5	YBR231C	HOP2	P53187	214 aa		11.38	□□□□□ -0.59
SWC5	YBR231C	YGR111W	P53265	400 aa		11.38	□□□□□ -0.59
SWC5	YBR231C	SPC98	P53540	846 aa		11.38	□□□□□ -0.59
SWC5	YBR231C	VAC14	Q06708	880 aa		11.38	□□□□□ -0.59
SWC5	YBR231C	REC8	Q12188	680 aa		11.38	□□□□□ -0.59
SWC5	YBR231C	TPK1	P06244	397 aa		11.37	□□□□□ -0.59
SWC5	YBR231C	PET123	P17558	318 aa		11.37	□□□□□ -0.59
SWC5	YBR231C	BCH2	P36122	765 aa		11.37	□□□□□ -0.59
SWC5	YBR231C	CCL1	P37366	393 aa		11.37	□□□□□ -0.59
SWC5	YBR231C	AGP2	P38090	596 aa		11.37	□□□□□ -0.59
SWC5	YBR231C	XDJ1	P39102	459 aa		11.37	□□□□□ -0.59
SWC5	YBR231C	DSE1	P40077	573 aa		11.37	□□□□□ -0.59
SWC5	YBR231C	SIP5	P40210	489 aa	Known RBP	11.37	□□□□□ -0.59
SWC5	YBR231C	POL31	P46957	487 aa		11.37	□□□□□ -0.59
SWC5	YBR231C	MND1	P53102	219 aa		11.37	□□□□□ -0.59
SWC5	YBR231C	YGL036W	P53185	909 aa	Predicted RBP	11.37	□□□□□ -0.59
SWC5	YBR231C	BTN2	P53286	410 aa		11.37	□□□□□ -0.59
SWC5	YBR231C	YLR422W	Q06409	1932 aa		11.37	□□□□□ -0.59
SWC5	YBR231C	VBA3	P25594	458 aa		11.36	□□□□□ -0.59

Retrieved 100 of 5,963 RNA–protein pairs in 71.7 ms