RNA–Protein interactions for RNA: YBR204C

LDH1, Transcript of Serine hydrolase, yeast

Gene LDH1, Length 1,128 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LDH1	YBR204C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	5.19	□□□□□ -1.58	not detected
LDH1	YBR204C	YEN1	P40028	759 aa		5.19	□□□□□ -1.58
LDH1	YBR204C	DOT6	P40059	670 aa	Known RBP	5.19	□□□□□ -1.58
LDH1	YBR204C	STU2	P46675	888 aa		5.19	□□□□□ -1.58
LDH1	YBR204C	SSY5	P47002	699 aa		5.19	□□□□□ -1.58
LDH1	YBR204C	YGR237C	P50089	785 aa		5.19	□□□□□ -1.58
LDH1	YBR204C	NPY1	P53164	384 aa		5.19	□□□□□ -1.58
LDH1	YBR204C	TIM44	Q01852	431 aa		5.19	□□□□□ -1.58
LDH1	YBR204C	TYS1	P36421	394 aa	Known RBP	5.18	□□□□□ -1.58
LDH1	YBR204C	YFL052W	P43551	465 aa		5.18	□□□□□ -1.58
LDH1	YBR204C	GPG1	P53130	126 aa		5.18	□□□□□ -1.58
LDH1	YBR204C	YMR206W	Q03695	313 aa		5.18	□□□□□ -1.58
LDH1	YBR204C	ACF2	Q12168	779 aa		5.18	□□□□□ -1.58
LDH1	YBR204C	YLR149C	Q99296	730 aa		5.18	□□□□□ -1.58
LDH1	YBR204C	CCR4	P31384	837 aa	Known RBP	5.17	□□□□□ -1.58
LDH1	YBR204C	SEC21	P32074	935 aa	Known RBP	5.17	□□□□□ -1.58
LDH1	YBR204C	YKR051W	P36142	418 aa		5.17	□□□□□ -1.58
LDH1	YBR204C	STB4	P50104	949 aa		5.17	□□□□□ -1.58
LDH1	YBR204C	UBC9	P50623	157 aa	Predicted RBP	5.17	□□□□□ -1.58
LDH1	YBR204C	ASI2	P53895	289 aa		5.17	□□□□□ -1.58
LDH1	YBR204C	MTQ2	Q03920	221 aa	Predicted RBP	5.17	□□□□□ -1.58
LDH1	YBR204C	TUB3	P09734	445 aa	Known RBP	5.16	□□□□□ -1.58
LDH1	YBR204C	SSB1	P11484	613 aa	Known RBP	5.16	□□□□□ -1.58
LDH1	YBR204C	CKB2	P38930	258 aa		5.16	□□□□□ -1.58
LDH1	YBR204C	SAK1	P38990	1142 aa		5.16	□□□□□ -1.58
LDH1	YBR204C	PZF1	P39933	429 aa		5.16	□□□□□ -1.58
LDH1	YBR204C	SSB2	P40150	613 aa	Known RBP	5.16	□□□□□ -1.58
LDH1	YBR204C	YJR096W	P47137	282 aa		5.16	□□□□□ -1.58
LDH1	YBR204C	SLU7	Q02775	382 aa	Known RBP	5.16	□□□□□ -1.58
LDH1	YBR204C	TMN2	Q04562	672 aa		5.16	□□□□□ -1.58
LDH1	YBR204C	RPN7	Q06103	429 aa	Known RBP	5.16	□□□□□ -1.58
LDH1	YBR204C	PEX19	Q07418	342 aa		5.16	□□□□□ -1.58
LDH1	YBR204C	GPR1	Q12361	961 aa		5.16	□□□□□ -1.58
LDH1	YBR204C	SWM1	Q12379	170 aa		5.16	□□□□□ -1.58
LDH1	YBR204C	Q0142	Q9ZZW4	58 aa		5.16	□□□□□ -1.58
LDH1	YBR204C	PRP19	P32523	503 aa	Known RBP	5.15	□□□□□ -1.59
LDH1	YBR204C	YKR018C	P36114	725 aa		5.15	□□□□□ -1.59
LDH1	YBR204C	VHR1	P40522	640 aa		5.15	□□□□□ -1.59
LDH1	YBR204C	PFA3	P42836	336 aa		5.15	□□□□□ -1.59
LDH1	YBR204C	MUS81	Q04149	632 aa	Predicted RBP	5.15	□□□□□ -1.59
LDH1	YBR204C	HFD1	Q04458	532 aa		5.15	□□□□□ -1.59
LDH1	YBR204C	FAP7	Q12055	197 aa	Predicted RBP	5.15	□□□□□ -1.59
LDH1	YBR204C	PPR1	P07272	904 aa	Predicted RBP	5.14	□□□□□ -1.59
LDH1	YBR204C	ALG7	P07286	448 aa		5.14	□□□□□ -1.59
LDH1	YBR204C	PRP4	P20053	465 aa	Known RBP	5.14	□□□□□ -1.59
LDH1	YBR204C	GPP1	P41277	250 aa	Known RBP	5.14	□□□□□ -1.59
LDH1	YBR204C	MTR3	P48240	250 aa	Predicted RBP	5.14	□□□□□ -1.59
LDH1	YBR204C	QRI1	P43123	477 aa	Known RBP	5.13	□□□□□ -1.59
LDH1	YBR204C	PCL10	P53124	433 aa		5.13	□□□□□ -1.59
LDH1	YBR204C	ASM4	Q05166	528 aa		5.13	□□□□□ -1.59
LDH1	YBR204C	NGG1	P32494	702 aa		5.12	□□□□□ -1.59
LDH1	YBR204C	PAF1	P38351	445 aa		5.12	□□□□□ -1.59
LDH1	YBR204C	MIP6	P38760	659 aa	Known RBP	5.12	□□□□□ -1.59
LDH1	YBR204C	RET2	P43621	546 aa		5.12	□□□□□ -1.59
LDH1	YBR204C	PKH1	Q03407	766 aa		5.12	□□□□□ -1.59
LDH1	YBR204C	IRC10	Q08118	586 aa		5.12	□□□□□ -1.59
LDH1	YBR204C	YLR415C	O13578	112 aa		5.11	□□□□□ -1.59
LDH1	YBR204C	MET3	P08536	511 aa		5.11	□□□□□ -1.59
LDH1	YBR204C	SIC1	P38634	284 aa		5.11	□□□□□ -1.59
LDH1	YBR204C	GZF3	P42944	551 aa	Known RBP	5.11	□□□□□ -1.59
LDH1	YBR204C	ERG5	P54781	538 aa		5.11	□□□□□ -1.59
LDH1	YBR204C	ARP4	P80428	489 aa		5.11	□□□□□ -1.59
LDH1	YBR204C	MUK1	Q02866	612 aa		5.11	□□□□□ -1.59
LDH1	YBR204C	IOC4	Q04213	475 aa		5.11	□□□□□ -1.59
LDH1	YBR204C	YTM1	Q12024	460 aa	Predicted RBP	5.11	□□□□□ -1.59
LDH1	YBR204C	TRM13	Q12383	476 aa		5.11	□□□□□ -1.59
LDH1	YBR204C	TRM11	Q12463	433 aa		5.11	□□□□□ -1.59
LDH1	YBR204C	CTF13	P35203	478 aa		5.1	□□□□□ -1.59
LDH1	YBR204C	MNN4	P36044	1178 aa		5.1	□□□□□ -1.59
LDH1	YBR204C	TDA3	P38758	523 aa		5.1	□□□□□ -1.59
LDH1	YBR204C	OAF1	P39720	1047 aa	Predicted RBP	5.1	□□□□□ -1.59
LDH1	YBR204C	CCT5	P40413	562 aa	Known RBP	5.1	□□□□□ -1.59
LDH1	YBR204C	YGR153W	P48238	217 aa		5.1	□□□□□ -1.59
LDH1	YBR204C	ORC4	P54791	529 aa		5.1	□□□□□ -1.59
LDH1	YBR204C	DCS2	Q12123	353 aa		5.1	□□□□□ -1.59
LDH1	YBR204C	MRC1	P25588	1096 aa		5.09	□□□□□ -1.59
LDH1	YBR204C	RPP1	P38786	293 aa		5.09	□□□□□ -1.59
LDH1	YBR204C	SSZ1	P38788	538 aa	Known RBP	5.09	□□□□□ -1.59
LDH1	YBR204C	YJR039W	P47107	1121 aa		5.09	□□□□□ -1.59
LDH1	YBR204C	YBP2	P53169	641 aa		5.09	□□□□□ -1.59
LDH1	YBR204C	DLT1	Q04216	342 aa		5.09	□□□□□ -1.59
LDH1	YBR204C	HBT1	Q07653	1046 aa	Known RBP	5.09	□□□□□ -1.59
LDH1	YBR204C	TMA17	Q12513	150 aa		5.09	□□□□□ -1.59
LDH1	YBR204C	TOM20	P35180	183 aa		5.08	□□□□□ -1.6
LDH1	YBR204C	MAL31	P38156	614 aa		5.08	□□□□□ -1.6
LDH1	YBR204C	ATF1	P40353	525 aa		5.08	□□□□□ -1.6
LDH1	YBR204C	MNN11	P46985	422 aa	Known RBP	5.08	□□□□□ -1.6
LDH1	YBR204C	DAS1	P47005	663 aa		5.08	□□□□□ -1.6
LDH1	YBR204C	PRP31	P49704	494 aa	Predicted RBP	5.08	□□□□□ -1.6
LDH1	YBR204C	ECM9	Q02202	377 aa		5.08	□□□□□ -1.6
LDH1	YBR204C	FRE5	Q08908	694 aa		5.08	□□□□□ -1.6
LDH1	YBR204C	EUG1	P32474	517 aa		5.07	□□□□□ -1.6
LDH1	YBR204C	MTH1	P35198	433 aa		5.07	□□□□□ -1.6
LDH1	YBR204C	YBR259W	P38338	688 aa		5.07	□□□□□ -1.6
LDH1	YBR204C	ECM1	P39715	212 aa		5.07	□□□□□ -1.6
LDH1	YBR204C	ELO3	P40319	345 aa		5.07	□□□□□ -1.6
LDH1	YBR204C	MRPS35	P53292	345 aa		5.07	□□□□□ -1.6
LDH1	YBR204C	GND2	P53319	492 aa		5.07	□□□□□ -1.6
LDH1	YBR204C	BRE5	P53741	515 aa	Known RBP	5.07	□□□□□ -1.6
LDH1	YBR204C	NRG1	Q03125	231 aa		5.07	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 39 ms