RNA–Protein interactions for RNA: YBL014C

RRN6, Transcript of Component of the core factor (CF) rDNA transcription factor complex, yeast

Gene RRN6, Length 2,685 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRN6	YBL014C	PHO8	P11491	566 aa		3.89	□□□□□ -1.79
RRN6	YBL014C	VMA2	P16140	517 aa	Known RBP	3.89	□□□□□ -1.79
RRN6	YBL014C	PDC6	P26263	563 aa	Known RBP	3.89	□□□□□ -1.79
RRN6	YBL014C	TIM23	P32897	222 aa		3.89	□□□□□ -1.79
RRN6	YBL014C	XRS2	P33301	854 aa		3.89	□□□□□ -1.79
RRN6	YBL014C	VPS35	P34110	944 aa		3.89	□□□□□ -1.79
RRN6	YBL014C	MCD4	P36051	919 aa		3.89	□□□□□ -1.79
RRN6	YBL014C	GPB2	P39717	880 aa		3.89	□□□□□ -1.79
RRN6	YBL014C	RPS26A	P39938	119 aa	Known RBP	3.89	□□□□□ -1.79
RRN6	YBL014C	RPS26B	P39939	119 aa	Known RBP	3.89	□□□□□ -1.79
RRN6	YBL014C	TCB2	P48231	1178 aa		3.89	□□□□□ -1.79
RRN6	YBL014C	CCM1	P48237	864 aa	Predicted RBP	3.89	□□□□□ -1.79
RRN6	YBL014C	VID30	P53076	958 aa		3.89	□□□□□ -1.79
RRN6	YBL014C	BOP3	P53958	396 aa		3.89	□□□□□ -1.79
RRN6	YBL014C	VPS60	Q03390	229 aa		3.89	□□□□□ -1.79
RRN6	YBL014C	RBA50	Q04418	439 aa		3.89	□□□□□ -1.79
RRN6	YBL014C	TKL1	P23254	680 aa	Known RBP	3.88	□□□□□ -1.79
RRN6	YBL014C	STE11	P23561	717 aa		3.88	□□□□□ -1.79
RRN6	YBL014C	MLF3	P32047	452 aa		3.88	□□□□□ -1.79
RRN6	YBL014C	YSC83	P32792	385 aa		3.88	□□□□□ -1.79
RRN6	YBL014C	VRP1	P37370	817 aa		3.88	□□□□□ -1.79
RRN6	YBL014C	FAA3	P39002	694 aa		3.88	□□□□□ -1.79
RRN6	YBL014C	SSN3	P39073	555 aa		3.88	□□□□□ -1.79
RRN6	YBL014C	YGR125W	P53273	1036 aa		3.88	□□□□□ -1.79
RRN6	YBL014C	SML1	Q04964	104 aa		3.88	□□□□□ -1.79
RRN6	YBL014C	MET32	Q12041	191 aa		3.88	□□□□□ -1.79
RRN6	YBL014C	CFT2	Q12102	859 aa	Predicted RBP	3.88	□□□□□ -1.79
RRN6	YBL014C	HXT1	P32465	570 aa		3.88	□□□□□ -1.79
RRN6	YBL014C	EUG1	P32474	517 aa		3.88	□□□□□ -1.79
RRN6	YBL014C	APE3	P37302	537 aa	Known RBP	3.88	□□□□□ -1.79
RRN6	YBL014C	REG2	P38232	338 aa		3.88	□□□□□ -1.79
RRN6	YBL014C	ERC1	P38767	581 aa		3.88	□□□□□ -1.79
RRN6	YBL014C	SDS3	P40505	327 aa		3.88	□□□□□ -1.79
RRN6	YBL014C	AIM21	P40563	679 aa		3.88	□□□□□ -1.79
RRN6	YBL014C	LCB2	P40970	561 aa		3.88	□□□□□ -1.79
RRN6	YBL014C	CLA4	P48562	842 aa		3.88	□□□□□ -1.79
RRN6	YBL014C	HUL5	P53119	910 aa		3.88	□□□□□ -1.79
RRN6	YBL014C	HED1	Q03937	162 aa		3.88	□□□□□ -1.79
RRN6	YBL014C	VAC14	Q06708	880 aa		3.88	□□□□□ -1.79
RRN6	YBL014C	YPR078C	Q06813	372 aa		3.88	□□□□□ -1.79
RRN6	YBL014C	Q0182	Q9ZZW1	134 aa		3.88	□□□□□ -1.79
RRN6	YBL014C	RIF1	P29539	1916 aa		3.88	□□□□□ -1.79
RRN6	YBL014C	CDC19	P00549	500 aa	Known RBP	3.88	□□□□□ -1.79
RRN6	YBL014C	DBP5	P20449	482 aa	Known RBP	3.88	□□□□□ -1.79
RRN6	YBL014C	MSN1	P22148	382 aa		3.88	□□□□□ -1.79
RRN6	YBL014C	NIP100	P33420	868 aa		3.88	□□□□□ -1.79
RRN6	YBL014C	UBP13	P38187	747 aa		3.88	□□□□□ -1.79
RRN6	YBL014C	SMC2	P38989	1170 aa	Known RBP	3.88	□□□□□ -1.79
RRN6	YBL014C	VAC8	P39968	578 aa		3.88	□□□□□ -1.79
RRN6	YBL014C	UBP15	P50101	1230 aa		3.88	□□□□□ -1.79
RRN6	YBL014C	YLR297W	Q05899	129 aa		3.88	□□□□□ -1.79
RRN6	YBL014C	YLR001C	Q07895	862 aa		3.88	□□□□□ -1.79
RRN6	YBL014C	LAA1	P39526	2014 aa		3.87	□□□□□ -1.79
RRN6	YBL014C	DPB3	P27344	201 aa		3.87	□□□□□ -1.79
RRN6	YBL014C	SMC1	P32908	1225 aa		3.87	□□□□□ -1.79
RRN6	YBL014C	DBP7	P36120	742 aa	Known RBP	3.87	□□□□□ -1.79
RRN6	YBL014C	BUD16	P39988	312 aa		3.87	□□□□□ -1.79
RRN6	YBL014C	NTA1	P40354	457 aa		3.87	□□□□□ -1.79
RRN6	YBL014C	NDC80	P40460	691 aa		3.87	□□□□□ -1.79
RRN6	YBL014C	MMM1	P41800	426 aa		3.87	□□□□□ -1.79
RRN6	YBL014C	AVT1	P47082	602 aa		3.87	□□□□□ -1.79
RRN6	YBL014C	TAM41	P53230	385 aa		3.87	□□□□□ -1.79
RRN6	YBL014C	TIM8	P57744	87 aa		3.87	□□□□□ -1.79
RRN6	YBL014C	ROD1	Q02805	837 aa		3.87	□□□□□ -1.79
RRN6	YBL014C	SLD5	Q03406	294 aa		3.87	□□□□□ -1.79
RRN6	YBL014C	GIR2	Q03768	265 aa	Predicted RBP	3.87	□□□□□ -1.79
RRN6	YBL014C	SOV1	Q04748	898 aa		3.87	□□□□□ -1.79
RRN6	YBL014C	YMR321C	Q04898	105 aa		3.87	□□□□□ -1.79
RRN6	YBL014C	BSC2	Q05611	235 aa		3.87	□□□□□ -1.79
RRN6	YBL014C	DUS4	Q06063	367 aa		3.87	□□□□□ -1.79
RRN6	YBL014C	CSR1	Q06705	408 aa	Known RBP	3.87	□□□□□ -1.79
RRN6	YBL014C	OPY2	Q06810	360 aa		3.87	□□□□□ -1.79
RRN6	YBL014C	RLP24	Q07915	199 aa	Known RBP	3.87	□□□□□ -1.79
RRN6	YBL014C	MLH2	Q07980	695 aa		3.87	□□□□□ -1.79
RRN6	YBL014C	CKI1	P20485	582 aa		3.87	□□□□□ -1.79
RRN6	YBL014C	CDC48	P25694	835 aa	Known RBP	3.87	□□□□□ -1.79
RRN6	YBL014C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	3.87	□□□□□ -1.79	not detected
RRN6	YBL014C	YEL043W	P32618	956 aa		3.87	□□□□□ -1.79
RRN6	YBL014C	SPC42	P36094	363 aa		3.87	□□□□□ -1.79
RRN6	YBL014C	YKL023W	P36103	277 aa	Known RBP	3.87	□□□□□ -1.79
RRN6	YBL014C	TVP38	P36164	337 aa		3.87	□□□□□ -1.79
RRN6	YBL014C	REI1	P38344	393 aa	Predicted RBP	3.87	□□□□□ -1.79
RRN6	YBL014C	TCD1	P38756	429 aa		3.87	□□□□□ -1.79
RRN6	YBL014C	SET5	P38890	526 aa	Known RBP	3.87	□□□□□ -1.79
RRN6	YBL014C	HMF1	P40037	129 aa	Known RBP	3.87	□□□□□ -1.79
RRN6	YBL014C	QDR2	P40474	542 aa		3.87	□□□□□ -1.79
RRN6	YBL014C	SMC3	P47037	1230 aa		3.87	□□□□□ -1.79
RRN6	YBL014C	VPS53	P47061	822 aa		3.87	□□□□□ -1.79
RRN6	YBL014C	COS5	P47187	383 aa		3.87	□□□□□ -1.79
RRN6	YBL014C	PRP31	P49704	494 aa	Predicted RBP	3.87	□□□□□ -1.79
RRN6	YBL014C	SAM37	P50110	327 aa		3.87	□□□□□ -1.79
RRN6	YBL014C	MAL13	P53338	473 aa		3.87	□□□□□ -1.79
RRN6	YBL014C	DOS2	P54858	310 aa		3.87	□□□□□ -1.79
RRN6	YBL014C	NGL3	Q03210	505 aa		3.87	□□□□□ -1.79
RRN6	YBL014C	DON1	Q05610	365 aa		3.87	□□□□□ -1.79
RRN6	YBL014C	SIL1	Q08199	421 aa		3.87	□□□□□ -1.79
RRN6	YBL014C	CDC53	Q12018	815 aa	Known RBP	3.87	□□□□□ -1.79
RRN6	YBL014C	TY1A-DR3	Q12441	440 aa		3.87	□□□□□ -1.79
RRN6	YBL014C	TRP2	P00899	507 aa	Known RBP	3.86	□□□□□ -1.79
RRN6	YBL014C	RPP2B	P02400	110 aa	Known RBP	3.86	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 71.1 ms