RNA–Protein interactions for RNA: YAL047C

SPC72, Transcript of Component of the cytoplasmic Tub4p (gamma-tubulin) complex, yeastyeast

Gene SPC72, Length 1,869 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC72YAL047C YPT53P36019 220 aa3.24□□□□□ -1.89
SPC72YAL047C MCD4P36051 919 aa3.24□□□□□ -1.89
SPC72YAL047C DOT6P40059 670 aaKnown RBP3.24□□□□□ -1.89
SPC72YAL047C SNP1Q00916 300 aaPredicted RBP3.24□□□□□ -1.89
SPC72YAL047C POB3Q04636 552 aaKnown RBP3.24□□□□□ -1.89
SPC72YAL047C IRC13Q08630 104 aa3.24□□□□□ -1.89
SPC72YAL047C ATG11Q12527 1178 aa3.24□□□□□ -1.89
SPC72YAL047C MDM12Q92328 271 aa3.24□□□□□ -1.89
SPC72YAL047C PCL5P38794 229 aa3.23□□□□□ -1.89
SPC72YAL047C BNA2P47125 453 aa3.23□□□□□ -1.89
SPC72YAL047C CIT2P08679 460 aa3.22□□□□□ -1.89
SPC72YAL047C SPC42P36094 363 aa3.22□□□□□ -1.89
SPC72YAL047C CBR1P38626 284 aaKnown RBP3.22□□□□□ -1.89
SPC72YAL047C CAF16P43569 289 aa3.22□□□□□ -1.89
SPC72YAL047C GND2P53319 492 aa3.22□□□□□ -1.89
SPC72YAL047C RPN7Q06103 429 aaKnown RBP3.22□□□□□ -1.89
SPC72YAL047C IRC10Q08118 586 aa3.22□□□□□ -1.89
SPC72YAL047C GPR1Q12361 961 aa3.22□□□□□ -1.89
SPC72YAL047C YTA7P40340 1379 aa3.22□□□□□ -1.89
SPC72YAL047C MET6P05694 767 aaKnown RBP3.22□□□□□ -1.89
SPC72YAL047C CDC43P18898 376 aa3.22□□□□□ -1.89
SPC72YAL047C MEF1P25039 761 aa3.22□□□□□ -1.89
SPC72YAL047C MSH2P25847 964 aa3.22□□□□□ -1.89
SPC72YAL047C PEX6P33760 1030 aa3.22□□□□□ -1.89
SPC72YAL047C MTH1P35198 433 aa3.22□□□□□ -1.89
SPC72YAL047C HSL7P38274 827 aa3.22□□□□□ -1.89
SPC72YAL047C BCD1P38772 366 aa3.22□□□□□ -1.89
SPC72YAL047C REV7P38927 245 aa3.22□□□□□ -1.89
SPC72YAL047C ECM1P39715 212 aa3.22□□□□□ -1.89
SPC72YAL047C FMP52P40008 231 aa3.22□□□□□ -1.89
SPC72YAL047C SDS3P40505 327 aa3.22□□□□□ -1.89
SPC72YAL047C UGO1Q03327 502 aa3.22□□□□□ -1.89
SPC72YAL047C CTK1Q03957 528 aaKnown RBP3.22□□□□□ -1.89
SPC72YAL047C NHX1Q04121 633 aa3.22□□□□□ -1.89
SPC72YAL047C FPR4Q06205 392 aaPredicted RBP3.22□□□□□ -1.89
SPC72YAL047C YLR149CQ99296 730 aa3.22□□□□□ -1.89
SPC72YAL047C SRD1P09007 221 aa3.21□□□□□ -1.9
SPC72YAL047C RAD18P10862 487 aa3.21□□□□□ -1.9
SPC72YAL047C HOG1P32485 435 aa3.21□□□□□ -1.9
SPC72YAL047C TEX1P53851 422 aaKnown RBP3.21□□□□□ -1.9
SPC72YAL047C SSL2Q00578 843 aa3.21□□□□□ -1.9
SPC72YAL047C SGO1Q08490 590 aa3.21□□□□□ -1.9
SPC72YAL047C Q0142Q9ZZW4 58 aa3.21□□□□□ -1.9
SPC72YAL047C CCT3P39077 534 aaKnown RBP3.2□□□□□ -1.9
SPC72YAL047C HOS4P40480 1083 aa3.2□□□□□ -1.9
SPC72YAL047C TEL2P53038 688 aa3.2□□□□□ -1.9
SPC72YAL047C ORC1P54784 914 aaPredicted RBP3.2□□□□□ -1.9
SPC72YAL047C TY1B-DR4Q07793 1604 aa3.2□□□□□ -1.9
SPC72YAL047C ADE2P21264 571 aaKnown RBP3.2□□□□□ -1.9
SPC72YAL047C MVD1P32377 396 aaKnown RBP3.2□□□□□ -1.9
SPC72YAL047C APL2P36000 726 aaPredicted RBP3.2□□□□□ -1.9
SPC72YAL047C YKR051WP36142 418 aa3.2□□□□□ -1.9
SPC72YAL047C TRZ1P36159 838 aaPredicted RBP3.2□□□□□ -1.9
SPC72YAL047C MIP6P38760 659 aaKnown RBP3.2□□□□□ -1.9
SPC72YAL047C QRI1P43123 477 aaKnown RBP3.2□□□□□ -1.9
SPC72YAL047C UBC11P52492 156 aa3.2□□□□□ -1.9
SPC72YAL047C YAP1802P53309 568 aa3.2□□□□□ -1.9
SPC72YAL047C MCM21Q06675 368 aa3.2□□□□□ -1.9
SPC72YAL047C MRH1Q12117 320 aaPredicted RBP3.2□□□□□ -1.9
SPC72YAL047C GFA1P14742 717 aaKnown RBP3.19□□□□□ -1.9
SPC72YAL047C KIN3P22209 435 aa3.19□□□□□ -1.9
SPC72YAL047C PPG1P32838 368 aa3.19□□□□□ -1.9
SPC72YAL047C PCL10P53124 433 aa3.19□□□□□ -1.9
SPC72YAL047C YHR112CP38716 378 aa3.18□□□□□ -1.9
SPC72YAL047C BAP3P41815 604 aa3.18□□□□□ -1.9
SPC72YAL047C UBC9P50623 157 aaPredicted RBP3.18□□□□□ -1.9
SPC72YAL047C MTL1P53214 551 aa3.18□□□□□ -1.9
SPC72YAL047C COX18P53239 316 aa3.18□□□□□ -1.9
SPC72YAL047C ARG5,6Q01217 863 aa3.18□□□□□ -1.9
SPC72YAL047C NTG2Q08214 380 aa3.18□□□□□ -1.9
SPC72YAL047C HCA4P20448 770 aaKnown RBP3.18□□□□□ -1.9
SPC72YAL047C YKR018CP36114 725 aa3.18□□□□□ -1.9
SPC72YAL047C REC102Q02721 264 aa3.18□□□□□ -1.9
SPC72YAL047C COG8Q04632 607 aa3.18□□□□□ -1.9
SPC72YAL047C YKL033W-AQ86ZR7 236 aa3.18□□□□□ -1.9
SPC72YAL047C HIR1P32479 840 aa3.17□□□□□ -1.9
SPC72YAL047C YEL1P34225 687 aa3.17□□□□□ -1.9
SPC72YAL047C SFB3P38810 929 aa3.17□□□□□ -1.9
SPC72YAL047C FMO1P38866 432 aa3.17□□□□□ -1.9
SPC72YAL047C NUP60P39705 539 aa3.17□□□□□ -1.9
SPC72YAL047C DMC1P25453 334 aa3.16□□□□□ -1.9
SPC72YAL047C TDP1P38319 544 aa3.16□□□□□ -1.9
SPC72YAL047C PAN2P53010 1115 aaPredicted RBP3.16□□□□□ -1.9
SPC72YAL047C AIM14P53109 570 aa3.16□□□□□ -1.9
SPC72YAL047C PYC1P11154 1178 aaKnown RBP3.16□□□□□ -1.9
SPC72YAL047C RNR1P21524 888 aaKnown RBP3.16□□□□□ -1.9
SPC72YAL047C MIH1P23748 554 aa3.16□□□□□ -1.9
SPC72YAL047C SFP1P32432 683 aa3.16□□□□□ -1.9
SPC72YAL047C SMX3P54999 86 aaPredicted RBP3.16□□□□□ -1.9
SPC72YAL047C TFB2Q02939 513 aa3.16□□□□□ -1.9
SPC72YAL047C YML122CQ03207 126 aa3.16□□□□□ -1.9
SPC72YAL047C DIA2Q08496 732 aaPredicted RBP3.16□□□□□ -1.9
SPC72YAL047C GIN4Q12263 1142 aa3.16□□□□□ -1.9
SPC72YAL047C CLF1Q12309 687 aaPredicted RBP3.16□□□□□ -1.9
SPC72YAL047C AIM44Q99299 758 aa3.16□□□□□ -1.9
SPC72YAL047C HMG1P12683 1054 aa3.15□□□□□ -1.91
SPC72YAL047C SFL1P20134 766 aa3.15□□□□□ -1.91
SPC72YAL047C PCL2P25693 308 aa3.15□□□□□ -1.91
SPC72YAL047C RRP14P36080 434 aaKnown RBP3.15□□□□□ -1.91
SPC72YAL047C APN2P38207 520 aa3.15□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 55.6 ms