RNA–Protein interactions for RNA: YAL021C

CCR4, Transcript of Component of the CCR4-NOT transcriptional complex, yeastyeast

Gene CCR4, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCR4YAL021C VPS21P36017 210 aaKnown RBP7.66□□□□□ -1.18
CCR4YAL021C APM3P38153 483 aa7.66□□□□□ -1.18
CCR4YAL021C SNL1P40548 159 aa7.66□□□□□ -1.18
CCR4YAL021C MKT1P40850 830 aaKnown RBP7.66□□□□□ -1.18
CCR4YAL021C MMM1P41800 426 aa7.66□□□□□ -1.18
CCR4YAL021C VMA10P48836 114 aaKnown RBP7.66□□□□□ -1.18
CCR4YAL021C NIT3P49954 291 aa7.66□□□□□ -1.18
CCR4YAL021C DSE4P53753 1117 aa7.66□□□□□ -1.18
CCR4YAL021C VPS16Q03308 798 aa7.66□□□□□ -1.18
CCR4YAL021C NAB6Q03735 1134 aaKnown RBP RIP-Chip data7.66□□□□□ -1.18not detected
CCR4YAL021C ARP6Q12509 438 aa7.66□□□□□ -1.18
CCR4YAL021C JIP3O13555 125 aa7.65□□□□□ -1.18
CCR4YAL021C MEF1P25039 761 aa7.65□□□□□ -1.18
CCR4YAL021C CHK1P38147 527 aa7.65□□□□□ -1.18
CCR4YAL021C GIP1P38229 639 aa7.65□□□□□ -1.18
CCR4YAL021C BNA3P47039 444 aaKnown RBP7.65□□□□□ -1.18
CCR4YAL021C FOL2P51601 243 aaKnown RBP7.65□□□□□ -1.18
CCR4YAL021C SPC105P53148 917 aa7.65□□□□□ -1.18
CCR4YAL021C SIW14P53965 281 aa7.65□□□□□ -1.18
CCR4YAL021C SWP1Q02795 286 aa7.65□□□□□ -1.18
CCR4YAL021C HMO1Q03973 246 aaKnown RBP7.65□□□□□ -1.18
CCR4YAL021C SUB2Q07478 446 aaKnown RBP7.65□□□□□ -1.18
CCR4YAL021C THP3Q12049 470 aaKnown RBP7.65□□□□□ -1.18
CCR4YAL021C YCF1P39109 1515 aaKnown RBP7.65□□□□□ -1.18
CCR4YAL021C TY1B-BRQ12193 1756 aa7.65□□□□□ -1.18
CCR4YAL021C TY1B-GR3Q12316 1755 aa7.65□□□□□ -1.18
CCR4YAL021C TY1B-ORQ92393 1755 aa7.65□□□□□ -1.18
CCR4YAL021C PRP5P21372 849 aaPredicted RBP7.64□□□□□ -1.19
CCR4YAL021C GYP6P32806 458 aa7.64□□□□□ -1.19
CCR4YAL021C TDP1P38319 544 aa7.64□□□□□ -1.19
CCR4YAL021C RTC3P38804 111 aaPredicted RBP7.64□□□□□ -1.19
CCR4YAL021C REV7P38927 245 aa7.64□□□□□ -1.19
CCR4YAL021C JLP2P40206 208 aa7.64□□□□□ -1.19
CCR4YAL021C MDE1P47095 244 aa7.64□□□□□ -1.19
CCR4YAL021C POL32P47110 350 aa7.64□□□□□ -1.19
CCR4YAL021C YJR079WP47126 109 aa7.64□□□□□ -1.19
CCR4YAL021C OKP1P53298 406 aa7.64□□□□□ -1.19
CCR4YAL021C YMR114CQ04471 368 aaKnown RBP7.64□□□□□ -1.19
CCR4YAL021C STP2P38704 541 aa7.64□□□□□ -1.19
CCR4YAL021C HXT6P39003 570 aaKnown RBP7.64□□□□□ -1.19
CCR4YAL021C HXT7P39004 570 aa7.64□□□□□ -1.19
CCR4YAL021C RCY1P39531 840 aa7.64□□□□□ -1.19
CCR4YAL021C OAF1P39720 1047 aaPredicted RBP7.64□□□□□ -1.19
CCR4YAL021C ULP2P40537 1034 aaPredicted RBP7.64□□□□□ -1.19
CCR4YAL021C CWC25P53854 179 aaKnown RBP7.64□□□□□ -1.19
CCR4YAL021C HEF3P53978 1044 aaKnown RBP7.64□□□□□ -1.19
CCR4YAL021C SPP1Q03012 353 aa7.64□□□□□ -1.19
CCR4YAL021C EAF1Q06337 982 aa7.64□□□□□ -1.19
CCR4YAL021C DIB1Q06819 143 aaPredicted RBP7.64□□□□□ -1.19
CCR4YAL021C MRN1Q08925 612 aaKnown RBP RIP-Chip data7.64□□□□□ -1.19 RIP-Chip
CCR4YAL021C REX3Q12090 404 aa7.64□□□□□ -1.19
CCR4YAL021C MSD1P15179 658 aaKnown RBP7.63□□□□□ -1.19
CCR4YAL021C ADE2P21264 571 aaKnown RBP7.63□□□□□ -1.19
CCR4YAL021C TDA3P38758 523 aa7.63□□□□□ -1.19
CCR4YAL021C TED1P40533 473 aa7.63□□□□□ -1.19
CCR4YAL021C PTA1Q01329 785 aaPredicted RBP7.63□□□□□ -1.19
CCR4YAL021C SPC24Q04477 213 aa7.63□□□□□ -1.19
CCR4YAL021C DTD1Q07648 150 aaKnown RBP7.63□□□□□ -1.19
CCR4YAL021C MCM16Q12262 181 aa7.63□□□□□ -1.19
CCR4YAL021C LAM4P38800 1345 aa7.63□□□□□ -1.19
CCR4YAL021C LAT1P12695 482 aaKnown RBP7.63□□□□□ -1.19
CCR4YAL021C MRPL8P22353 238 aa7.63□□□□□ -1.19
CCR4YAL021C SPB1P25582 841 aaPredicted RBP7.63□□□□□ -1.19
CCR4YAL021C YKL023WP36103 277 aaKnown RBP7.63□□□□□ -1.19
CCR4YAL021C TYS1P36421 394 aaKnown RBP7.63□□□□□ -1.19
CCR4YAL021C STS1P38637 319 aa7.63□□□□□ -1.19
CCR4YAL021C HSE1P38753 452 aa7.63□□□□□ -1.19
CCR4YAL021C RRM3P38766 723 aa7.63□□□□□ -1.19
CCR4YAL021C POL31P46957 487 aa7.63□□□□□ -1.19
CCR4YAL021C ARP10Q04549 284 aa7.63□□□□□ -1.19
CCR4YAL021C PGC1Q08959 321 aa7.63□□□□□ -1.19
CCR4YAL021C GYP5Q12344 894 aa7.63□□□□□ -1.19
CCR4YAL021C VPS15P22219 1454 aa7.63□□□□□ -1.19
CCR4YAL021C BPT1P14772 1559 aa7.63□□□□□ -1.19
CCR4YAL021C ICL1P28240 557 aaPredicted RBP7.62□□□□□ -1.19
CCR4YAL021C PRP19P32523 503 aaKnown RBP7.62□□□□□ -1.19
CCR4YAL021C SUV3P32580 737 aa7.62□□□□□ -1.19
CCR4YAL021C VMA8P32610 256 aaKnown RBP7.62□□□□□ -1.19
CCR4YAL021C FES1P38260 290 aa7.62□□□□□ -1.19
CCR4YAL021C RTS2P40962 232 aa7.62□□□□□ -1.19
CCR4YAL021C MAL11P53048 616 aa7.62□□□□□ -1.19
CCR4YAL021C ERP6P53198 216 aa7.62□□□□□ -1.19
CCR4YAL021C GMC2Q06201 188 aa7.62□□□□□ -1.19
CCR4YAL021C ICL2Q12031 575 aa7.62□□□□□ -1.19
CCR4YAL021C RTP1Q12751 981 aa7.62□□□□□ -1.19
CCR4YAL021C ARO1P08566 1588 aaKnown RBP7.62□□□□□ -1.19
CCR4YAL021C SIR4P11978 1358 aa7.62□□□□□ -1.19
CCR4YAL021C SWR1Q05471 1514 aa7.62□□□□□ -1.19
CCR4YAL021C NPP1P25353 742 aa7.62□□□□□ -1.19
CCR4YAL021C RPH1P39956 796 aa7.62□□□□□ -1.19
CCR4YAL021C GYP8P43570 497 aa7.62□□□□□ -1.19
CCR4YAL021C YNL193WP53870 558 aa7.62□□□□□ -1.19
CCR4YAL021C ORC4P54791 529 aa7.62□□□□□ -1.19
CCR4YAL021C MAK10Q02197 733 aa7.62□□□□□ -1.19
CCR4YAL021C YDR090CQ03193 310 aa7.62□□□□□ -1.19
CCR4YAL021C IVY1Q04934 453 aa7.62□□□□□ -1.19
CCR4YAL021C SGD1Q06132 899 aa7.62□□□□□ -1.19
CCR4YAL021C YLR352WQ06479 807 aa7.62□□□□□ -1.19
CCR4YAL021C SEY1Q99287 776 aa7.62□□□□□ -1.19
CCR4YAL021C TIF1P10081 395 aaKnown RBP7.61□□□□□ -1.19
Retrieved 100 of 5,963 RNA–protein pairs in 117.7 ms