RNA–Protein interactions for RNA: ENST00000641965.1

CASC19-270, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 2,329 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-270ENST00000641965 SSH1Q8WYL5 1049 aa9.66□□□□□ -0.86
CASC19-270ENST00000641965 WWC3Q9ULE0 1092 aa9.66□□□□□ -0.86
CASC19-270ENST00000641965 MRPL42Q9Y6G3 142 aaKnown RBP9.66□□□□□ -0.86
CASC19-270ENST00000641965 ERBB4Q15303 1308 aa9.66□□□□□ -0.86
CASC19-270ENST00000641965 TJP1Q07157 1748 aa9.65□□□□□ -0.86
CASC19-270ENST00000641965 LDLRAD1Q5T700 205 aa9.65□□□□□ -0.86
CASC19-270ENST00000641965 ZNF512BQ96KM6 892 aaPredicted RBP9.65□□□□□ -0.86
CASC19-270ENST00000641965 TSPAN18Q96SJ8 248 aa9.65□□□□□ -0.86
CASC19-270ENST00000641965 HDAC5Q9UQL6 1122 aa9.65□□□□□ -0.86
CASC19-270ENST00000641965 COL4A3BPQ9Y5P4 624 aa9.65□□□□□ -0.86
CASC19-270ENST00000641965 GTF2F1P35269 517 aaKnown RBP eCLIP9.65□□□□□ -0.87
CASC19-270ENST00000641965 MAP9Q49MG5 647 aa9.65□□□□□ -0.87
CASC19-270ENST00000641965 ARHGAP45Q92619 1136 aa9.65□□□□□ -0.87
CASC19-270ENST00000641965 SYTL4Q96C24 671 aaPredicted RBP9.65□□□□□ -0.87
CASC19-270ENST00000641965 TBC1D2BQ9UPU7 963 aa9.65□□□□□ -0.87
CASC19-270ENST00000641965 FARP1Q9Y4F1 1045 aaPredicted RBP9.65□□□□□ -0.87
CASC19-270ENST00000641965 RREB1Q92766 1687 aa9.64□□□□□ -0.87
CASC19-270ENST00000641965 ELL2O00472 640 aaPredicted RBP9.64□□□□□ -0.87
CASC19-270ENST00000641965 HMGB2P26583 209 aaKnown RBP9.64□□□□□ -0.87
CASC19-270ENST00000641965 DDX46Q7L014 1031 aaKnown RBP9.64□□□□□ -0.87
CASC19-270ENST00000641965 TPX2Q9ULW0 747 aaKnown RBP9.64□□□□□ -0.87
CASC19-270ENST00000641965 RGPD3A6NKT7 1758 aaPredicted RBP9.64□□□□□ -0.87
CASC19-270ENST00000641965 RGPD4Q7Z3J3 1758 aa9.64□□□□□ -0.87
CASC19-270ENST00000641965 PALLDQ8WX93 1383 aa9.64□□□□□ -0.87
CASC19-270ENST00000641965 SERPINB4P48594 390 aa9.64□□□□□ -0.87
CASC19-270ENST00000641965 FAM182BQ5T319 152 aa9.64□□□□□ -0.87
CASC19-270ENST00000641965 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.64□□□□□ -0.87
CASC19-270ENST00000641965 SUPT16HQ9Y5B9 1047 aaKnown RBP9.64□□□□□ -0.87
CASC19-270ENST00000641965 COL5A3P25940 1745 aaPredicted RBP9.63□□□□□ -0.87
CASC19-270ENST00000641965 BCAR3O75815 825 aa9.63□□□□□ -0.87
CASC19-270ENST00000641965 HDGFL1Q5TGJ6 251 aa9.63□□□□□ -0.87
CASC19-270ENST00000641965 IL17RAQ96F46 866 aa9.63□□□□□ -0.87
CASC19-270ENST00000641965 SLC4A9Q96Q91 983 aa9.63□□□□□ -0.87
CASC19-270ENST00000641965 PCDH12Q9NPG4 1184 aa9.63□□□□□ -0.87
CASC19-270ENST00000641965 CHST12Q9NRB3 414 aa9.63□□□□□ -0.87
CASC19-270ENST00000641965 TNS1Q9HBL0 1735 aaKnown RBP9.63□□□□□ -0.87
CASC19-270ENST00000641965 KIF16BQ96L93 1317 aa9.63□□□□□ -0.87
CASC19-270ENST00000641965 LOC102724428A0A0B4J2F2 783 aa9.62□□□□□ -0.87
CASC19-270ENST00000641965 IPO8O15397 1037 aaKnown RBP9.62□□□□□ -0.87
CASC19-270ENST00000641965 RRP1P56182 461 aaKnown RBP9.62□□□□□ -0.87
CASC19-270ENST00000641965 SIK1P57059 783 aa9.62□□□□□ -0.87
CASC19-270ENST00000641965 CSPP1Q1MSJ5 1256 aa9.62□□□□□ -0.87
CASC19-270ENST00000641965 PTF1AQ7RTS3 328 aa9.62□□□□□ -0.87
CASC19-270ENST00000641965 STK31Q9BXU1 1019 aa9.62□□□□□ -0.87
CASC19-270ENST00000641965 MFRPQ9BY79 579 aa9.62□□□□□ -0.87
CASC19-270ENST00000641965 DDX21Q9NR30 783 aaKnown RBP eCLIP9.62□□□□□ -0.87
CASC19-270ENST00000641965 SMC4Q9NTJ3 1288 aa9.62□□□□□ -0.87
CASC19-270ENST00000641965 DBF4Q9UBU7 674 aaPredicted RBP9.62□□□□□ -0.87
CASC19-270ENST00000641965 PDZRN3Q9UPQ7 1066 aa9.62□□□□□ -0.87
CASC19-270ENST00000641965 USP16Q9Y5T5 823 aa9.62□□□□□ -0.87
CASC19-270ENST00000641965 PRAMEF22A3QJZ6 481 aa9.62□□□□□ -0.87
CASC19-270ENST00000641965 PLSCR1O15162 318 aa9.62□□□□□ -0.87
CASC19-270ENST00000641965 PTCD1O75127 700 aaKnown RBP9.62□□□□□ -0.87
CASC19-270ENST00000641965 LIG1P18858 919 aa9.62□□□□□ -0.87
CASC19-270ENST00000641965 PDIA6Q15084 440 aa9.62□□□□□ -0.87
CASC19-270ENST00000641965 ZSWIM4Q9H7M6 989 aa9.62□□□□□ -0.87
CASC19-270ENST00000641965 HYPKQ9NX55 129 aa9.62□□□□□ -0.87
CASC19-270ENST00000641965 PRKAG2Q9UGJ0 569 aa9.62□□□□□ -0.87
CASC19-270ENST00000641965 PTPRCP08575 1304 aa9.61□□□□□ -0.87
CASC19-270ENST00000641965 STARD3NLO95772 234 aa9.61□□□□□ -0.87
CASC19-270ENST00000641965 CYP19A1P11511 503 aaPredicted RBP9.61□□□□□ -0.87
CASC19-270ENST00000641965 CBLBQ13191 982 aa9.61□□□□□ -0.87
CASC19-270ENST00000641965 PDE3AQ14432 1141 aa9.61□□□□□ -0.87
CASC19-270ENST00000641965 RTL5Q5HYW3 569 aaPredicted RBP9.61□□□□□ -0.87
CASC19-270ENST00000641965 C1orf131Q8NDD1 294 aaKnown RBP9.61□□□□□ -0.87
CASC19-270ENST00000641965 NEUROD6Q96NK8 337 aa9.61□□□□□ -0.87
CASC19-270ENST00000641965 TINF2Q9BSI4 451 aa9.61□□□□□ -0.87
CASC19-270ENST00000641965 RBM42Q9BTD8 480 aaKnown RBP9.61□□□□□ -0.87
CASC19-270ENST00000641965 TAF1LQ8IZX4 1826 aa9.61□□□□□ -0.87
CASC19-270ENST00000641965 EIF2S2P20042 333 aaKnown RBP9.61□□□□□ -0.87
CASC19-270ENST00000641965 RC3H1Q5TC82 1133 aaKnown RBP9.61□□□□□ -0.87
CASC19-270ENST00000641965 LRP10Q7Z4F1 713 aa9.61□□□□□ -0.87
CASC19-270ENST00000641965 DNAJC10Q8IXB1 793 aa9.61□□□□□ -0.87
CASC19-270ENST00000641965 CCDC85AQ96PX6 553 aaPredicted RBP9.61□□□□□ -0.87
CASC19-270ENST00000641965 NOB1Q9ULX3 412 aaKnown RBP9.61□□□□□ -0.87
CASC19-270ENST00000641965 TRIM37O94972 964 aa9.6□□□□□ -0.87
CASC19-270ENST00000641965 NUBP1P53384 320 aa9.6□□□□□ -0.87
CASC19-270ENST00000641965 SLC27A3Q5K4L6 730 aa9.6□□□□□ -0.87
CASC19-270ENST00000641965 ENOX1Q8TC92 643 aaKnown RBP9.6□□□□□ -0.87
CASC19-270ENST00000641965 ATP6V1AP38606 617 aa9.6□□□□□ -0.87
CASC19-270ENST00000641965 TNNI2P48788 182 aa9.6□□□□□ -0.87
CASC19-270ENST00000641965 MAP2K5Q13163 448 aa9.6□□□□□ -0.87
CASC19-270ENST00000641965 ITPK1Q13572 414 aa9.6□□□□□ -0.87
CASC19-270ENST00000641965 SLC39A13Q96H72 371 aa9.6□□□□□ -0.87
CASC19-270ENST00000641965 ZNF830Q96NB3 372 aaPredicted RBP9.6□□□□□ -0.87
CASC19-270ENST00000641965 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.6□□□□□ -0.87
CASC19-270ENST00000641965 API5Q9BZZ5 524 aaKnown RBP9.6□□□□□ -0.87
CASC19-270ENST00000641965 PUF60Q9UHX1 559 aaKnown RBP9.6□□□□□ -0.87
CASC19-270ENST00000641965 N4BP2Q86UW6 1770 aaPredicted RBP9.59□□□□□ -0.87
CASC19-270ENST00000641965 NBPF26B4DH59 902 aa9.59□□□□□ -0.87
CASC19-270ENST00000641965 VAMP1P23763 118 aa9.59□□□□□ -0.87
CASC19-270ENST00000641965 NBPF14Q5TI25 921 aa9.59□□□□□ -0.87
CASC19-270ENST00000641965 NBPF10Q6P3W6 841 aaKnown RBP9.59□□□□□ -0.87
CASC19-270ENST00000641965 CASC1Q6TDU7 716 aa9.59□□□□□ -0.87
CASC19-270ENST00000641965 ATF7IPQ6VMQ6 1270 aa9.59□□□□□ -0.87
CASC19-270ENST00000641965 FBXO33Q7Z6M2 555 aa9.59□□□□□ -0.87
CASC19-270ENST00000641965 NBPF15Q8N660 670 aa9.59□□□□□ -0.87
CASC19-270ENST00000641965 PPP1R12CQ9BZL4 782 aa9.59□□□□□ -0.87
CASC19-270ENST00000641965 SFMBT1Q9UHJ3 866 aa9.59□□□□□ -0.87
CASC19-270ENST00000641965 TTF2Q9UNY4 1162 aaKnown RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms