RNA–Protein interactions for RNA: ENST00000640610.1

PAX6-273, Transcript of paired box 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX6, Length 2,730 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-273ENST00000640610 CHGBP05060 677 aa11.3□□□□□ -0.6
PAX6-273ENST00000640610 LRP10Q7Z4F1 713 aa11.3□□□□□ -0.6
PAX6-273ENST00000640610 MPNDQ8N594 471 aa11.3□□□□□ -0.6
PAX6-273ENST00000640610 OGFRQ9NZT2 677 aa11.3□□□□□ -0.6
PAX6-273ENST00000640610 TCHHQ07283 1943 aa11.3□□□□□ -0.6
PAX6-273ENST00000640610 ATP5J2-PTCD1G3V325 749 aa11.29□□□□□ -0.6
PAX6-273ENST00000640610 PTCD1O75127 700 aaKnown RBP11.29□□□□□ -0.6
PAX6-273ENST00000640610 G3BP1Q13283 466 aaKnown RBP eCLIP11.29□□□□□ -0.6
PAX6-273ENST00000640610 GCKRQ14397 625 aa11.29□□□□□ -0.6
PAX6-273ENST00000640610 JAKMIP1Q96N16 626 aaKnown RBP11.29□□□□□ -0.6
PAX6-273ENST00000640610 TAF6LQ9Y6J9 622 aa11.29□□□□□ -0.6
PAX6-273ENST00000640610 EP400Q96L91 3159 aa11.29□□□□□ -0.6
PAX6-273ENST00000640610 SPDYE4A6NLX3 237 aa11.29□□□□□ -0.6
PAX6-273ENST00000640610 FAM177BA6PVY3 158 aa11.29□□□□□ -0.6
PAX6-273ENST00000640610 UBE2HP62256 183 aa11.29□□□□□ -0.6
PAX6-273ENST00000640610 GABPB1Q06547 395 aaPredicted RBP11.29□□□□□ -0.6
PAX6-273ENST00000640610 NMIQ13287 307 aaPredicted RBP11.29□□□□□ -0.6
PAX6-273ENST00000640610 PAPPAQ13219 1627 aa11.29□□□□□ -0.6
PAX6-273ENST00000640610 A0A0D9SFI3 127 aa11.29□□□□□ -0.6
PAX6-273ENST00000640610 ONECUT3O60422 494 aaPredicted RBP11.29□□□□□ -0.6
PAX6-273ENST00000640610 U2AF2P26368 475 aaKnown RBP eCLIP11.29□□□□□ -0.6
PAX6-273ENST00000640610 UBR2Q8IWV8 1755 aa11.28□□□□□ -0.6
PAX6-273ENST00000640610 EPB41L2O43491 1005 aaKnown RBP11.28□□□□□ -0.6
PAX6-273ENST00000640610 ERC1Q8IUD2 1116 aa11.28□□□□□ -0.6
PAX6-273ENST00000640610 TCEANC2Q96MN5 208 aa11.28□□□□□ -0.6
PAX6-273ENST00000640610 METTL22Q9BUU2 404 aaPredicted RBP11.28□□□□□ -0.6
PAX6-273ENST00000640610 BRWD3Q6RI45 1802 aa11.28□□□□□ -0.6
PAX6-273ENST00000640610 ST3GAL1Q11201 340 aa11.28□□□□□ -0.6
PAX6-273ENST00000640610 UBE3BQ7Z3V4 1068 aa11.28□□□□□ -0.6
PAX6-273ENST00000640610 CCDC83Q8IWF9 413 aa11.28□□□□□ -0.6
PAX6-273ENST00000640610 PIGBQ92521 554 aa11.28□□□□□ -0.6
PAX6-273ENST00000640610 EVI5LQ96CN4 794 aa11.28□□□□□ -0.6
PAX6-273ENST00000640610 GPATCH3Q96I76 525 aa11.28□□□□□ -0.6
PAX6-273ENST00000640610 TMOD3Q9NYL9 352 aa11.28□□□□□ -0.6
PAX6-273ENST00000640610 ANKRD13DQ6ZTN6 518 aa11.27□□□□□ -0.61
PAX6-273ENST00000640610 ATP6V1DQ9Y5K8 247 aa11.27□□□□□ -0.61
PAX6-273ENST00000640610 RBM8AQ9Y5S9 174 aaKnown RBP11.27□□□□□ -0.61
PAX6-273ENST00000640610 NEXNQ0ZGT2 675 aa11.27□□□□□ -0.61
PAX6-273ENST00000640610 ZNF772Q68DY9 489 aaPredicted RBP11.27□□□□□ -0.61
PAX6-273ENST00000640610 ZNF589Q86UQ0 364 aaPredicted RBP11.27□□□□□ -0.61
PAX6-273ENST00000640610 SEPT12Q8IYM1 358 aa11.27□□□□□ -0.61
PAX6-273ENST00000640610 TTC5Q8N0Z6 440 aa11.27□□□□□ -0.61
PAX6-273ENST00000640610 BBXQ8WY36 941 aaPredicted RBP11.27□□□□□ -0.61
PAX6-273ENST00000640610 SYTL4Q96C24 671 aaPredicted RBP11.27□□□□□ -0.61
PAX6-273ENST00000640610 ACSBG1Q96GR2 724 aa11.27□□□□□ -0.61
PAX6-273ENST00000640610 FUCA2Q9BTY2 467 aa11.27□□□□□ -0.61
PAX6-273ENST00000640610 KCNF1Q9H3M0 494 aa11.27□□□□□ -0.61
PAX6-273ENST00000640610 LIMCH1Q9UPQ0 1083 aa11.27□□□□□ -0.61
PAX6-273ENST00000640610 CNPY2Q9Y2B0 182 aa11.27□□□□□ -0.61
PAX6-273ENST00000640610 CCDC171Q6TFL3 1326 aa11.26□□□□□ -0.61
PAX6-273ENST00000640610 NECTIN1Q15223 517 aa11.26□□□□□ -0.61
PAX6-273ENST00000640610 FAM182BQ5T319 152 aa11.26□□□□□ -0.61
PAX6-273ENST00000640610 ZNF771Q7L3S4 317 aaPredicted RBP11.26□□□□□ -0.61
PAX6-273ENST00000640610 NECAB1Q8N987 351 aa11.26□□□□□ -0.61
PAX6-273ENST00000640610 PYCARDQ9ULZ3 195 aa11.26□□□□□ -0.61
PAX6-273ENST00000640610 SNRPA1P09661 255 aaKnown RBP11.26□□□□□ -0.61
PAX6-273ENST00000640610 SYT1P21579 422 aa11.26□□□□□ -0.61
PAX6-273ENST00000640610 CREB3L3Q68CJ9 461 aa11.26□□□□□ -0.61
PAX6-273ENST00000640610 RUFY2Q8WXA3 655 aa11.26□□□□□ -0.61
PAX6-273ENST00000640610 FSD1Q9BTV5 496 aa11.26□□□□□ -0.61
PAX6-273ENST00000640610 PDRG1Q9NUG6 133 aa11.26□□□□□ -0.61
PAX6-273ENST00000640610 CGNQ9P2M7 1197 aaKnown RBP11.26□□□□□ -0.61
PAX6-273ENST00000640610 BCL9O00512 1426 aa11.26□□□□□ -0.61
PAX6-273ENST00000640610 RFX5P48382 616 aaPredicted RBP11.25□□□□□ -0.61
PAX6-273ENST00000640610 PLCB2Q00722 1185 aa11.25□□□□□ -0.61
PAX6-273ENST00000640610 TFCP2Q12800 502 aa11.25□□□□□ -0.61
PAX6-273ENST00000640610 ASAP1Q9ULH1 1129 aa11.25□□□□□ -0.61
PAX6-273ENST00000640610 KCPQ6ZWJ8 1503 aa11.25□□□□□ -0.61
PAX6-273ENST00000640610 SMTNL1A8MU46 457 aa11.25□□□□□ -0.61
PAX6-273ENST00000640610 ZSCAN22P10073 491 aaPredicted RBP11.25□□□□□ -0.61
PAX6-273ENST00000640610 PTPN12Q05209 780 aaKnown RBP11.25□□□□□ -0.61
PAX6-273ENST00000640610 NCBP1Q09161 790 aaKnown RBP11.25□□□□□ -0.61
PAX6-273ENST00000640610 ME3Q16798 604 aa11.25□□□□□ -0.61
PAX6-273ENST00000640610 RGS17Q9UGC6 210 aaPredicted RBP11.25□□□□□ -0.61
PAX6-273ENST00000640610 DBNLQ9UJU6 430 aaKnown RBP11.25□□□□□ -0.61
PAX6-273ENST00000640610 SBF2Q86WG5 1849 aa11.24□□□□□ -0.61
PAX6-273ENST00000640610 GJB2P29033 226 aa11.24□□□□□ -0.61
PAX6-273ENST00000640610 KCNJ4P48050 445 aa11.24□□□□□ -0.61
PAX6-273ENST00000640610 FMNL2Q96PY5 1086 aa11.24□□□□□ -0.61
PAX6-273ENST00000640610 ZSWIM6Q9HCJ5 1215 aa11.24□□□□□ -0.61
PAX6-273ENST00000640610 TPCN1Q9ULQ1 816 aa11.24□□□□□ -0.61
PAX6-273ENST00000640610 SMC3Q9UQE7 1217 aa11.24□□□□□ -0.61
PAX6-273ENST00000640610 COL15A1P39059 1388 aa11.24□□□□□ -0.61
PAX6-273ENST00000640610 A0A087WZG4 1122 aa11.24□□□□□ -0.61
PAX6-273ENST00000640610 NBPF26B4DH59 902 aa11.24□□□□□ -0.61
PAX6-273ENST00000640610 SLC27A2O14975 620 aa11.24□□□□□ -0.61
PAX6-273ENST00000640610 KCNQ2O43526 872 aa11.24□□□□□ -0.61
PAX6-273ENST00000640610 STX6O43752 255 aa11.24□□□□□ -0.61
PAX6-273ENST00000640610 SLFNL1Q499Z3 407 aa11.24□□□□□ -0.61
PAX6-273ENST00000640610 NBPF14Q5TI25 921 aa11.24□□□□□ -0.61
PAX6-273ENST00000640610 NBPF10Q6P3W6 841 aaKnown RBP11.24□□□□□ -0.61
PAX6-273ENST00000640610 NBPF15Q8N660 670 aa11.24□□□□□ -0.61
PAX6-273ENST00000640610 ATG3Q9NT62 314 aa11.24□□□□□ -0.61
PAX6-273ENST00000640610 GTF2E1P29083 439 aaPredicted RBP11.23□□□□□ -0.61
PAX6-273ENST00000640610 RBM6P78332 1123 aaKnown RBP11.23□□□□□ -0.61
PAX6-273ENST00000640610 CCDC129Q6ZRS4 1044 aa11.23□□□□□ -0.61
PAX6-273ENST00000640610 MAP4K1Q92918 833 aa11.23□□□□□ -0.61
PAX6-273ENST00000640610 KCNB2Q92953 911 aa11.23□□□□□ -0.61
PAX6-273ENST00000640610 SEC62Q99442 399 aaKnown RBP11.23□□□□□ -0.61
PAX6-273ENST00000640610 CTNNA3Q9UI47 895 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms