RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 DPP8Q6V1X1 898 aaPredicted RBP16.47■□□□□ 0.23
GTF3A-209ENST00000640289 MPNDQ8N594 471 aa16.47■□□□□ 0.23
GTF3A-209ENST00000640289 TAOK3Q9H2K8 898 aa16.47■□□□□ 0.23
GTF3A-209ENST00000640289 CHMP4BQ9H444 224 aaKnown RBP16.47■□□□□ 0.23
GTF3A-209ENST00000640289 LRRC37AA6NMS7 1700 aa16.46■□□□□ 0.23
GTF3A-209ENST00000640289 WTIPA6NIX2 430 aaPredicted RBP16.46■□□□□ 0.23
GTF3A-209ENST00000640289 CHRNDQ07001 517 aa16.46■□□□□ 0.23
GTF3A-209ENST00000640289 HELBQ8NG08 1087 aaPredicted RBP16.46■□□□□ 0.23
GTF3A-209ENST00000640289 SIL1Q9H173 461 aa16.46■□□□□ 0.23
GTF3A-209ENST00000640289 CNNM1Q9NRU3 951 aa16.46■□□□□ 0.23
GTF3A-209ENST00000640289 ANKIB1Q9P2G1 1089 aa16.46■□□□□ 0.23
GTF3A-209ENST00000640289 CENPBP07199 599 aaPredicted RBP16.45■□□□□ 0.22
GTF3A-209ENST00000640289 POLA2Q14181 598 aa16.45■□□□□ 0.22
GTF3A-209ENST00000640289 GPR101Q96P66 508 aaPredicted RBP16.45■□□□□ 0.22
GTF3A-209ENST00000640289 PSMD1Q99460 953 aa16.45■□□□□ 0.22
GTF3A-209ENST00000640289 ZNF277Q9NRM2 450 aaPredicted RBP16.45■□□□□ 0.22
GTF3A-209ENST00000640289 POLLQ9UGP5 575 aa16.45■□□□□ 0.22
GTF3A-209ENST00000640289 SPEF2Q9C093 1822 aa16.45■□□□□ 0.22
GTF3A-209ENST00000640289 LTBP3Q9NS15 1303 aa16.45■□□□□ 0.22
GTF3A-209ENST00000640289 DUOX1Q9NRD9 1551 aa16.44■□□□□ 0.22
GTF3A-209ENST00000640289 TAF5LO75529 589 aa16.44■□□□□ 0.22
GTF3A-209ENST00000640289 GRIPAP1Q4V328 841 aa16.44■□□□□ 0.22
GTF3A-209ENST00000640289 EXOC6Q8TAG9 804 aa16.44■□□□□ 0.22
GTF3A-209ENST00000640289 TBC1D16Q8TBP0 767 aa16.44■□□□□ 0.22
GTF3A-209ENST00000640289 SSH3Q8TE77 659 aa16.44■□□□□ 0.22
GTF3A-209ENST00000640289 RTFDC1Q9BY42 306 aaPredicted RBP16.44■□□□□ 0.22
GTF3A-209ENST00000640289 COPRSQ9NQ92 184 aa16.44■□□□□ 0.22
GTF3A-209ENST00000640289 PODXL2Q9NZ53 605 aa16.44■□□□□ 0.22
GTF3A-209ENST00000640289 RIPOR2Q9Y4F9 1068 aa16.44■□□□□ 0.22
GTF3A-209ENST00000640289 XDHP47989 1333 aa16.44■□□□□ 0.22
GTF3A-209ENST00000640289 GOLGB1Q14789 3259 aaKnown RBP16.43■□□□□ 0.22
GTF3A-209ENST00000640289 SNAP23O00161 211 aa16.43■□□□□ 0.22
GTF3A-209ENST00000640289 EYA2O00167 538 aa16.43■□□□□ 0.22
GTF3A-209ENST00000640289 UFL1O94874 794 aa16.43■□□□□ 0.22
GTF3A-209ENST00000640289 ATG9AQ7Z3C6 839 aa16.43■□□□□ 0.22
GTF3A-209ENST00000640289 SIRT2Q8IXJ6 389 aa16.43■□□□□ 0.22
GTF3A-209ENST00000640289 GGA1Q9UJY5 639 aa16.43■□□□□ 0.22
GTF3A-209ENST00000640289 FER1L6Q2WGJ9 1857 aa16.43■□□□□ 0.22
GTF3A-209ENST00000640289 C6orf229H3BNL8 230 aa16.42■□□□□ 0.22
GTF3A-209ENST00000640289 LMNB1P20700 586 aa16.42■□□□□ 0.22
GTF3A-209ENST00000640289 C9orf131Q5VYM1 1079 aa16.42■□□□□ 0.22
GTF3A-209ENST00000640289 RPAP2Q8IXW5 612 aaPredicted RBP16.42■□□□□ 0.22
GTF3A-209ENST00000640289 ANKRD2Q9GZV1 360 aa16.42■□□□□ 0.22
GTF3A-209ENST00000640289 RNF181Q9P0P0 153 aa16.42■□□□□ 0.22
GTF3A-209ENST00000640289 ATP2B4P23634 1241 aa16.41■□□□□ 0.22
GTF3A-209ENST00000640289 IARSP41252 1262 aaKnown RBP16.41■□□□□ 0.22
GTF3A-209ENST00000640289 AOC3Q16853 763 aa16.41■□□□□ 0.22
GTF3A-209ENST00000640289 METTL24Q5JXM2 366 aa16.41■□□□□ 0.22
GTF3A-209ENST00000640289 SUPT20HQ8NEM7 779 aa16.41■□□□□ 0.22
GTF3A-209ENST00000640289 PCDHB15Q9Y5E8 787 aa16.41■□□□□ 0.22
GTF3A-209ENST00000640289 LTBP1Q14766 1721 aa16.41■□□□□ 0.22
GTF3A-209ENST00000640289 MROH5Q6ZUA9 1318 aa16.41■□□□□ 0.22
GTF3A-209ENST00000640289 RIMBP2O15034 1052 aa16.4■□□□□ 0.22
GTF3A-209ENST00000640289 PPIP5K2O43314 1243 aa16.4■□□□□ 0.22
GTF3A-209ENST00000640289 CIAO1O76071 339 aa16.4■□□□□ 0.22
GTF3A-209ENST00000640289 VGLL2Q8N8G2 317 aa16.4■□□□□ 0.22
GTF3A-209ENST00000640289 FBXO3Q9UK99 471 aa16.4■□□□□ 0.22
GTF3A-209ENST00000640289 UTRNP46939 3433 aa16.39■□□□□ 0.21
GTF3A-209ENST00000640289 SURF6O75683 361 aaKnown RBP16.39■□□□□ 0.21
GTF3A-209ENST00000640289 KLRK1P26718 216 aa16.39■□□□□ 0.21
GTF3A-209ENST00000640289 IL15P40933 162 aaPredicted RBP16.39■□□□□ 0.21
GTF3A-209ENST00000640289 KIAA2012Q0VF49 1180 aa16.39■□□□□ 0.21
GTF3A-209ENST00000640289 WASHC4Q2M389 1173 aa16.39■□□□□ 0.21
GTF3A-209ENST00000640289 LARGE2Q8N3Y3 721 aa16.39■□□□□ 0.21
GTF3A-209ENST00000640289 EYA3Q99504 573 aa16.39■□□□□ 0.21
GTF3A-209ENST00000640289 LEMD3Q9Y2U8 911 aa16.39■□□□□ 0.21
GTF3A-209ENST00000640289 COL4A5P29400 1685 aa16.39■□□□□ 0.21
GTF3A-209ENST00000640289 ZNF804BA4D1E1 1349 aa16.39■□□□□ 0.21
GTF3A-209ENST00000640289 PDE8BO95263 885 aa16.38■□□□□ 0.21
GTF3A-209ENST00000640289 KCNJ4P48050 445 aa16.38■□□□□ 0.21
GTF3A-209ENST00000640289 G3BP1Q13283 466 aaKnown RBP eCLIP16.38■□□□□ 0.21
GTF3A-209ENST00000640289 TXNRD3Q86VQ6 643 aa16.38■□□□□ 0.21
GTF3A-209ENST00000640289 EXOC6BQ9Y2D4 811 aa16.38■□□□□ 0.21
GTF3A-209ENST00000640289 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.38■□□□□ 0.21
GTF3A-209ENST00000640289 HMMRO75330 724 aa16.37■□□□□ 0.21
GTF3A-209ENST00000640289 SASH1O94885 1247 aa16.37■□□□□ 0.21
GTF3A-209ENST00000640289 TFCP2Q12800 502 aa16.37■□□□□ 0.21
GTF3A-209ENST00000640289 ZC3H12CQ9C0D7 883 aaKnown RBP16.37■□□□□ 0.21
GTF3A-209ENST00000640289 CEP126Q9P2H0 1117 aa16.37■□□□□ 0.21
GTF3A-209ENST00000640289 NOP58Q9Y2X3 529 aaKnown RBP16.37■□□□□ 0.21
GTF3A-209ENST00000640289 IRS2Q9Y4H2 1338 aa16.37■□□□□ 0.21
GTF3A-209ENST00000640289 OS9Q13438 667 aaPredicted RBP16.36■□□□□ 0.21
GTF3A-209ENST00000640289 UBE4AQ14139 1066 aa16.36■□□□□ 0.21
GTF3A-209ENST00000640289 DOK7Q18PE1 504 aa16.36■□□□□ 0.21
GTF3A-209ENST00000640289 VPS33BQ9H267 617 aa16.36■□□□□ 0.21
GTF3A-209ENST00000640289 DBNDD1Q9H9R9 158 aa16.36■□□□□ 0.21
GTF3A-209ENST00000640289 MED23Q9ULK4 1368 aa16.36■□□□□ 0.21
GTF3A-209ENST00000640289 FGFR2P21802 821 aa16.35■□□□□ 0.21
GTF3A-209ENST00000640289 NIM1KQ8IY84 436 aa16.35■□□□□ 0.21
GTF3A-209ENST00000640289 JDP2Q8WYK2 163 aa16.35■□□□□ 0.21
GTF3A-209ENST00000640289 A0A1B0GUL6 1792 aa16.35■□□□□ 0.21
GTF3A-209ENST00000640289 SBF1O95248 1867 aa16.34■□□□□ 0.21
GTF3A-209ENST00000640289 ECE2O60344 883 aa16.34■□□□□ 0.21
GTF3A-209ENST00000640289 PUM3Q15397 648 aaKnown RBP16.34■□□□□ 0.21
GTF3A-209ENST00000640289 YDJCA8MPS7 323 aa16.33■□□□□ 0.2
GTF3A-209ENST00000640289 FZD9O00144 591 aa16.33■□□□□ 0.2
GTF3A-209ENST00000640289 APBB1O00213 710 aa16.33■□□□□ 0.2
GTF3A-209ENST00000640289 AAMPQ13685 434 aa16.33■□□□□ 0.2
GTF3A-209ENST00000640289 ATP2B3Q16720 1220 aa16.33■□□□□ 0.2
GTF3A-209ENST00000640289 C15orf52Q6ZUT6 534 aaKnown RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms