RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 OPA1O60313 960 aa21.09■□□□□ 0.97
SCARB2-213ENST00000638680 BBXQ8WY36 941 aaPredicted RBP21.09■□□□□ 0.97
SCARB2-213ENST00000638680 ATRIPQ8WXE1 791 aa21.09■□□□□ 0.97
SCARB2-213ENST00000638680 PIP4K2BP78356 416 aa21.09■□□□□ 0.97
SCARB2-213ENST00000638680 KRT23Q9C075 422 aa21.09■□□□□ 0.97
SCARB2-213ENST00000638680 SYCP3Q8IZU3 236 aa21.08■□□□□ 0.97
SCARB2-213ENST00000638680 RTN1Q16799 776 aa21.08■□□□□ 0.97
SCARB2-213ENST00000638680 IFNKQ9P0W0 207 aa21.08■□□□□ 0.97
SCARB2-213ENST00000638680 SCLT1Q96NL6 688 aa21.08■□□□□ 0.96
SCARB2-213ENST00000638680 PUF60Q9UHX1 559 aaKnown RBP21.08■□□□□ 0.96
SCARB2-213ENST00000638680 BMP15O95972 392 aa21.08■□□□□ 0.96
SCARB2-213ENST00000638680 TRMT1LQ7Z2T5 733 aaKnown RBP21.08■□□□□ 0.96
SCARB2-213ENST00000638680 MICALL1Q8N3F8 863 aa21.08■□□□□ 0.96
SCARB2-213ENST00000638680 EHMT1Q9H9B1 1298 aa21.08■□□□□ 0.96
SCARB2-213ENST00000638680 DHX58Q96C10 678 aa21.07■□□□□ 0.96
SCARB2-213ENST00000638680 TACC1O75410 805 aa21.07■□□□□ 0.96
SCARB2-213ENST00000638680 IDI1Q13907 227 aa21.07■□□□□ 0.96
SCARB2-213ENST00000638680 CAPZA3Q96KX2 299 aa21.07■□□□□ 0.96
SCARB2-213ENST00000638680 OGFRQ9NZT2 677 aa21.07■□□□□ 0.96
SCARB2-213ENST00000638680 DCTPP1Q9H773 170 aa21.07■□□□□ 0.96
SCARB2-213ENST00000638680 LZTFL1Q9NQ48 299 aa21.07■□□□□ 0.96
SCARB2-213ENST00000638680 RRAGDQ9NQL2 400 aaPredicted RBP21.07■□□□□ 0.96
SCARB2-213ENST00000638680 AMOTL2Q9Y2J4 779 aa21.07■□□□□ 0.96
SCARB2-213ENST00000638680 NBPF7P0C2Y1 421 aaPredicted RBP21.07■□□□□ 0.96
SCARB2-213ENST00000638680 CEP85Q6P2H3 762 aa21.07■□□□□ 0.96
SCARB2-213ENST00000638680 ANKRD13DQ6ZTN6 518 aa21.07■□□□□ 0.96
SCARB2-213ENST00000638680 STXBP4Q6ZWJ1 553 aa21.07■□□□□ 0.96
SCARB2-213ENST00000638680 PLEKHM2Q8IWE5 1019 aa21.07■□□□□ 0.96
SCARB2-213ENST00000638680 RBSNQ9H1K0 784 aa21.07■□□□□ 0.96
SCARB2-213ENST00000638680 SPAG5Q96R06 1193 aa21.06■□□□□ 0.96
SCARB2-213ENST00000638680 USP26Q9BXU7 913 aa21.06■□□□□ 0.96
SCARB2-213ENST00000638680 ZFYP08048 801 aaPredicted RBP21.06■□□□□ 0.96
SCARB2-213ENST00000638680 SLF2Q8IX21 1173 aa21.06■□□□□ 0.96
SCARB2-213ENST00000638680 FBXO31Q5XUX0 539 aaPredicted RBP21.06■□□□□ 0.96
SCARB2-213ENST00000638680 UQCRFS1P1P0C7P4 283 aa21.06■□□□□ 0.96
SCARB2-213ENST00000638680 INTS4Q96HW7 963 aaKnown RBP21.06■□□□□ 0.96
SCARB2-213ENST00000638680 HOMER2Q9NSB8 354 aa21.06■□□□□ 0.96
SCARB2-213ENST00000638680 A0A1W2PRG0 241 aa21.05■□□□□ 0.96
SCARB2-213ENST00000638680 FOXO3O43524 673 aa21.05■□□□□ 0.96
SCARB2-213ENST00000638680 IFIT1BQ5T764 474 aaKnown RBP21.05■□□□□ 0.96
SCARB2-213ENST00000638680 CREB3L3Q68CJ9 461 aa21.05■□□□□ 0.96
SCARB2-213ENST00000638680 SELENOOQ9BVL4 669 aa21.05■□□□□ 0.96
SCARB2-213ENST00000638680 PA2G4Q9UQ80 394 aaKnown RBP21.05■□□□□ 0.96
SCARB2-213ENST00000638680 ABCA10Q8WWZ4 1543 aa21.05■□□□□ 0.96
SCARB2-213ENST00000638680 RHOXF2BP0C7M4 288 aa21.05■□□□□ 0.96
SCARB2-213ENST00000638680 ZNF569Q5MCW4 686 aa21.05■□□□□ 0.96
SCARB2-213ENST00000638680 RHOXF2Q9BQY4 288 aa21.05■□□□□ 0.96
SCARB2-213ENST00000638680 NSRP1Q9H0G5 558 aaKnown RBP21.05■□□□□ 0.96
SCARB2-213ENST00000638680 CUL7Q14999 1698 aa21.05■□□□□ 0.96
SCARB2-213ENST00000638680 IFNL2Q8IZJ0 200 aa21.05■□□□□ 0.96
SCARB2-213ENST00000638680 ANKRD24Q8TF21 1146 aa21.05■□□□□ 0.96
SCARB2-213ENST00000638680 DNAI2Q9GZS0 605 aa21.05■□□□□ 0.96
SCARB2-213ENST00000638680 ZBTB40Q9NUA8 1239 aa21.05■□□□□ 0.96
SCARB2-213ENST00000638680 SNRPA1P09661 255 aaKnown RBP21.04■□□□□ 0.96
SCARB2-213ENST00000638680 C6orf163Q5TEZ5 329 aa21.04■□□□□ 0.96
SCARB2-213ENST00000638680 ADGRL1O94910 1474 aa21.04■□□□□ 0.96
SCARB2-213ENST00000638680 PSMA7O14818 248 aa21.04■□□□□ 0.96
SCARB2-213ENST00000638680 PHACTR2O75167 634 aa21.04■□□□□ 0.96
SCARB2-213ENST00000638680 KRT83P78385 493 aa21.04■□□□□ 0.96
SCARB2-213ENST00000638680 FERMT2Q96AC1 680 aa21.04■□□□□ 0.96
SCARB2-213ENST00000638680 GUCA1BQ9UMX6 200 aa21.04■□□□□ 0.96
SCARB2-213ENST00000638680 TBCAO75347 108 aaKnown RBP21.04■□□□□ 0.96
SCARB2-213ENST00000638680 APOBRQ0VD83 1088 aa21.04■□□□□ 0.96
SCARB2-213ENST00000638680 MSL1Q68DK7 614 aa21.04■□□□□ 0.96
SCARB2-213ENST00000638680 RUFY3Q7L099 469 aa21.04■□□□□ 0.96
SCARB2-213ENST00000638680 ACEP12821 1306 aa21.04■□□□□ 0.96
SCARB2-213ENST00000638680 CHST3Q7LGC8 479 aa21.04■□□□□ 0.96
SCARB2-213ENST00000638680 CNNM2Q9H8M5 875 aa21.04■□□□□ 0.96
SCARB2-213ENST00000638680 TBC1D5Q92609 795 aa21.03■□□□□ 0.96
SCARB2-213ENST00000638680 SLC4A4Q9Y6R1 1079 aa21.03■□□□□ 0.96
SCARB2-213ENST00000638680 PAIP2Q9BPZ3 127 aaKnown RBP21.03■□□□□ 0.96
SCARB2-213ENST00000638680 NPHP3Q7Z494 1330 aa21.03■□□□□ 0.96
SCARB2-213ENST00000638680 NBPF11Q86T75 865 aa21.03■□□□□ 0.96
SCARB2-213ENST00000638680 FBF1Q8TES7 1133 aa21.03■□□□□ 0.96
SCARB2-213ENST00000638680 KRT86O43790 486 aa21.03■□□□□ 0.96
SCARB2-213ENST00000638680 CCDC172P0C7W6 258 aa21.03■□□□□ 0.96
SCARB2-213ENST00000638680 STX17P56962 302 aa21.03■□□□□ 0.96
SCARB2-213ENST00000638680 TMTC2Q8N394 836 aa21.03■□□□□ 0.96
SCARB2-213ENST00000638680 GRM8O00222 908 aa21.03■□□□□ 0.96
SCARB2-213ENST00000638680 TTC41PQ6P2S7 1318 aa21.02■□□□□ 0.96
SCARB2-213ENST00000638680 GTF3C6Q969F1 213 aa21.02■□□□□ 0.96
SCARB2-213ENST00000638680 CDC5LQ99459 802 aaKnown RBP21.02■□□□□ 0.96
SCARB2-213ENST00000638680 ASIC1P78348 528 aa21.02■□□□□ 0.96
SCARB2-213ENST00000638680 KIF5AQ12840 1032 aa21.02■□□□□ 0.96
SCARB2-213ENST00000638680 TSPYL6Q8N831 410 aa21.02■□□□□ 0.96
SCARB2-213ENST00000638680 HMGXB3Q12766 1538 aa21.02■□□□□ 0.96
SCARB2-213ENST00000638680 CHMLP26374 656 aa21.02■□□□□ 0.96
SCARB2-213ENST00000638680 FEZ1Q99689 392 aa21.02■□□□□ 0.96
SCARB2-213ENST00000638680 CRNKL1Q9BZJ0 848 aaKnown RBP21.02■□□□□ 0.96
SCARB2-213ENST00000638680 POGZQ7Z3K3 1410 aa21.02■□□□□ 0.96
SCARB2-213ENST00000638680 PTPDC1A2A3K4 754 aa21.02■□□□□ 0.96
SCARB2-213ENST00000638680 KIF4AO95239 1232 aa21.02■□□□□ 0.96
SCARB2-213ENST00000638680 BAG3O95817 575 aa21.02■□□□□ 0.96
SCARB2-213ENST00000638680 XAGE3Q8WTP9 111 aa21.02■□□□□ 0.96
SCARB2-213ENST00000638680 ESR2Q92731 530 aa21.02■□□□□ 0.96
SCARB2-213ENST00000638680 UTP14AQ9BVJ6 771 aaKnown RBP21.02■□□□□ 0.96
SCARB2-213ENST00000638680 UBXN1Q04323 297 aa21.02■□□□□ 0.95
SCARB2-213ENST00000638680 RPGRQ92834 1020 aaKnown RBP21.02■□□□□ 0.95
SCARB2-213ENST00000638680 RASAL2Q9UJF2 1139 aa21.02■□□□□ 0.95
SCARB2-213ENST00000638680 IKBKGQ9Y6K9 419 aa21.02■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms